MELO3C033278.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C033278.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Envelope-like protein
Location	chr08 : 16960604 .. 16960840 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGAGTATCATGTTATTTTGGGAATCGTTGTGGTGGCAAGCTCTCAGTCTTCGCATCTATCTATTGATGTTTTGGCTTCTGTCTTATCTCGAGGAACATTGTCAGTTTGGTCAGTGAATGAAATTTGTGTTGTATCCCTTAGTGTTAAATCTGTCATACTCCATAAGATTGACTTTACAAACTGGTTCCCTTCGTCGCGTGGTCCTAGTGCAGCAGATCAATCTCAAGAGTAG

mRNA sequence

ATGTTTGAGTATCATGTTATTTTGGGAATCGTTGTGGTGGCAAGCTCTCAGTCTTCGCATCTATCTATTGATGTTTTGGCTTCTGTCTTATCTCGAGGAACATTGTCAGTTTGGTCAGTGAATGAAATTTGTGTTGTATCCCTTAGTGTTAAATCTGTCATACTCCATAAGATTGACTTTACAAACTGGTTCCCTTCGTCGCGTGGTCCTAGTGCAGCAGATCAATCTCAAGAGTAG

Coding sequence (CDS)

ATGTTTGAGTATCATGTTATTTTGGGAATCGTTGTGGTGGCAAGCTCTCAGTCTTCGCATCTATCTATTGATGTTTTGGCTTCTGTCTTATCTCGAGGAACATTGTCAGTTTGGTCAGTGAATGAAATTTGTGTTGTATCCCTTAGTGTTAAATCTGTCATACTCCATAAGATTGACTTTACAAACTGGTTCCCTTCGTCGCGTGGTCCTAGTGCAGCAGATCAATCTCAAGAGTAG

Protein sequence

MFEYHVILGIVVVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPSSRGPSAADQSQE

Homology

[Close]

BLAST of MELO3C033278.2 vs. NCBI nr
Match: XP_008466685.1 (PREDICTED: uncharacterized protein LOC103504037 [Cucumis melo])

HSP 1 Score: 67.4 bits (163), Expect = 2.5e-08
Identity = 40/59 (67.80%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 8   LGIVVVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPS 67
           LG  VV+SSQSSH S D LASVLS+ TL VW +N I  VSLSVK VILHKI   N FPS
Sbjct: 250 LGNTVVSSSQSSHPSNDELASVLSKDTLLVWPLNGILAVSLSVKYVILHKIGIANLFPS 308

[Close]

BLAST of MELO3C033278.2 vs. NCBI nr
Match: XP_016901049.1 (PREDICTED: uncharacterized protein LOC103492891 [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-08
Identity = 39/66 (59.09%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 8   LGIVVVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPSS 67
           LG VV     SS  S DVLASVLS GTLS W VN I  VSL++K  ILHKI   NWFPSS
Sbjct: 302 LGNVVDIDCSSSSPSTDVLASVLSGGTLSAWHVNGIPAVSLNIKYAILHKIGIANWFPSS 361

Query: 68  RGPSAA 74
              S +
Sbjct: 362 HSSSVS 367

[Close]

BLAST of MELO3C033278.2 vs. NCBI nr
Match: XP_008460128.1 (PREDICTED: uncharacterized protein LOC103499027 [Cucumis melo])

HSP 1 Score: 66.6 bits (161), Expect = 4.2e-08
Identity = 39/64 (60.94%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 8   LGIVVVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPSS 67
           LG VV  +   S  S D+LASVLS G LS W VN I  V+LSVK VILHKID  NWFPSS
Sbjct: 64  LGNVVSINFSPSSSSTDILASVLSGGILSSWPVNGIPAVALSVKYVILHKIDIANWFPSS 123

Query: 68  RGPS 72
              S
Sbjct: 124 HASS 127

[Close]

BLAST of MELO3C033278.2 vs. NCBI nr
Match: XP_008450214.1 (PREDICTED: uncharacterized protein LOC103491875 [Cucumis melo])

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-07
Identity = 37/65 (56.92%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 9   GIVVVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPSSR 68
           G VV      S  S DVLASVLS GTLS W VN I  V+LS+K  ILHKI   NWFPSS 
Sbjct: 220 GNVVDIDCSPSSSSTDVLASVLSGGTLSTWLVNGILAVALSIKYAILHKIGIANWFPSSH 279

Query: 69  GPSAA 74
             S +
Sbjct: 280 ASSVS 284

[Close]

BLAST of MELO3C033278.2 vs. NCBI nr
Match: XP_008454690.1 (PREDICTED: uncharacterized protein LOC103495044 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-07
Identity = 38/60 (63.33%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 12  VVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPSSRGPS 71
           V  +S  S+ S   LA VLSRGTLS   VN I VVSLS+K VILHKIDF NWFPSS   S
Sbjct: 68  VEPNSSPSNPSNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASS 127

[Close]

BLAST of MELO3C033278.2 vs. TrEMBL
Match: tr|A0A1S3CS01|A0A1S3CS01_CUCME (uncharacterized protein LOC103504037 OS=Cucumis melo OX=3656 GN=LOC103504037 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-08
Identity = 40/59 (67.80%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 8   LGIVVVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPS 67
           LG  VV+SSQSSH S D LASVLS+ TL VW +N I  VSLSVK VILHKI   N FPS
Sbjct: 250 LGNTVVSSSQSSHPSNDELASVLSKDTLLVWPLNGILAVSLSVKYVILHKIGIANLFPS 308

[Close]

BLAST of MELO3C033278.2 vs. TrEMBL
Match: tr|A0A1S4DYJ3|A0A1S4DYJ3_CUCME (uncharacterized protein LOC103492891 OS=Cucumis melo OX=3656 GN=LOC103492891 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-08
Identity = 39/66 (59.09%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 8   LGIVVVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPSS 67
           LG VV     SS  S DVLASVLS GTLS W VN I  VSL++K  ILHKI   NWFPSS
Sbjct: 302 LGNVVDIDCSSSSPSTDVLASVLSGGTLSAWHVNGIPAVSLNIKYAILHKIGIANWFPSS 361

Query: 68  RGPSAA 74
              S +
Sbjct: 362 HSSSVS 367

[Close]

BLAST of MELO3C033278.2 vs. TrEMBL
Match: tr|A0A1S3CCA3|A0A1S3CCA3_CUCME (uncharacterized protein LOC103499027 OS=Cucumis melo OX=3656 GN=LOC103499027 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-08
Identity = 39/64 (60.94%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 8   LGIVVVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPSS 67
           LG VV  +   S  S D+LASVLS G LS W VN I  V+LSVK VILHKID  NWFPSS
Sbjct: 64  LGNVVSINFSPSSSSTDILASVLSGGILSSWPVNGIPAVALSVKYVILHKIDIANWFPSS 123

Query: 68  RGPS 72
              S
Sbjct: 124 HASS 127

[Close]

BLAST of MELO3C033278.2 vs. TrEMBL
Match: tr|A0A1S3BN53|A0A1S3BN53_CUCME (uncharacterized protein LOC103491875 OS=Cucumis melo OX=3656 GN=LOC103491875 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 37/65 (56.92%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 9   GIVVVASSQSSHLSIDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPSSR 68
           G VV      S  S DVLASVLS GTLS W VN I  V+LS+K  ILHKI   NWFPSS 
Sbjct: 220 GNVVDIDCSPSSSSTDVLASVLSGGTLSTWLVNGILAVALSIKYAILHKIGIANWFPSSH 279

Query: 69  GPSAA 74
             S +
Sbjct: 280 ASSVS 284

[Close]

BLAST of MELO3C033278.2 vs. TrEMBL
Match: tr|A0A1S3CS24|A0A1S3CS24_CUCME (uncharacterized protein LOC103504103 OS=Cucumis melo OX=3656 GN=LOC103504103 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.3e-07
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 23  IDVLASVLSRGTLSVWSVNEICVVSLSVKSVILHKIDFTNWFPSSRGPSAA 74
           I VLASVLS GTLS+W VN I +VSLSVK VILHKID  N FPSS   S +
Sbjct: 250 IRVLASVLSGGTLSIWLVNGISIVSLSVKYVILHKIDIANRFPSSHASSVS 300

The following BLAST results are available for this feature:

BLAST of MELO3C033278.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466685.1	2.5e-08	67.80	PREDICTED: uncharacterized protein LOC103504037 [Cucumis melo]	[more]
XP_016901049.1	3.2e-08	59.09	PREDICTED: uncharacterized protein LOC103492891 [Cucumis melo]	[more]
XP_008460128.1	4.2e-08	60.94	PREDICTED: uncharacterized protein LOC103499027 [Cucumis melo]	[more]
XP_008450214.1	1.6e-07	56.92	PREDICTED: uncharacterized protein LOC103491875 [Cucumis melo]	[more]
XP_008454690.1	3.6e-07	63.33	PREDICTED: uncharacterized protein LOC103495044 [Cucumis melo]	[more]

BLAST of MELO3C033278.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C033278.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C033278.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CS01\|A0A1S3CS01_CUCME	1.6e-08	67.80	uncharacterized protein LOC103504037 OS=Cucumis melo OX=3656 GN=LOC103504037 PE=...	[more]
tr\|A0A1S4DYJ3\|A0A1S4DYJ3_CUCME	2.1e-08	59.09	uncharacterized protein LOC103492891 OS=Cucumis melo OX=3656 GN=LOC103492891 PE=...	[more]
tr\|A0A1S3CCA3\|A0A1S3CCA3_CUCME	2.8e-08	60.94	uncharacterized protein LOC103499027 OS=Cucumis melo OX=3656 GN=LOC103499027 PE=...	[more]
tr\|A0A1S3BN53\|A0A1S3BN53_CUCME	1.1e-07	56.92	uncharacterized protein LOC103491875 OS=Cucumis melo OX=3656 GN=LOC103491875 PE=...	[more]
tr\|A0A1S3CS24\|A0A1S3CS24_CUCME	2.3e-07	68.63	uncharacterized protein LOC103504103 OS=Cucumis melo OX=3656 GN=LOC103504103 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033278.2.1	MELO3C033278.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C033278.2	Cucumber (Gy14) v2	cgybmedB281
MELO3C033278.2	Cucumber (Gy14) v1	cgymedB605
MELO3C033278.2	Cucurbita maxima (Rimu)	cmamedB708
MELO3C033278.2	Cucurbita moschata (Rifu)	cmomedB699
MELO3C033278.2	Cucurbita pepo (Zucchini)	cpemedB085
MELO3C033278.2	Wild cucumber (PI 183967)	cpimedB315
MELO3C033278.2	Cucumber (Chinese Long) v2	cumedB313
MELO3C033278.2	Bottle gourd (USVL1VR-Ls)	lsimedB166
MELO3C033278.2	Watermelon (Charleston Gray)	medwcgB530
MELO3C033278.2	Silver-seed gourd	carmedB0200
MELO3C033278.2	Cucumber (Chinese Long) v3	cucmedB322
MELO3C033278.2	Watermelon (97103) v2	medwmbB535
MELO3C033278.2	Wax gourd	medwgoB649