MELO3C033266.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C033266.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Envelope-like protein
Location	chr08 : 16282332 .. 16284214 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGTCGTTTGGGGTCAAGGTTCTCTAGTCTGCTACTTCACCTAAATGGAGCGGTGCTTACTGCATCTGATGCTCCTGAACATGAACCTAAGACAATTGCACTTAGCTACAGACTCTTTCAAGGCAATCATGTGCTTGATATTGACCATGATGTGCATCCAACTCGAGGCCCACGTATTTTTGTTACTTTACTGACTGGGATGAATCTGCTGAAGGCTTCTATTTGGATCGTGAATTAGCTACCCGCATTATTAATTCCTTGATTGTTTTGAATCTCGTGCACTGACTAACTCCATCACTCTATTGTCTGACGTTGATTAGAGGTTGATGCTCTCATTCGAAATTTGAAGTCTTGGGCACTAACTACTAGTCGTCAGCAGCCACCATCTGGTTAATGTCATTACTTTTCCGGTTCAAAAGGGGAGTGGATGTAATGAGGAAATGTTGAATGACTTAGAAATATTGTGGGATGTTTTTTTTTGTTTTTGATGGTTTTGGGCAGAAATGGATAATGTTATGACCCTATTCTTTTGGTGACTGTAGTTTTCTTTTGTGAAAAATGTAGTTTGAAAATCATCTTTTGTTTCCTAAATTGAAATATCTTCGGAATGGAATGACATCTGTCTTACTAAGAACTGACGGCTGCGAATGAATGAAATGACTCTGTGGTACTGCTGTTGTTAAACCAGAAAAGAAATTTCTTTTAGACAAAAGGGGGAGTTTGTTGAAATATAGTTTGTCTAAAAGAATATCTTTGAAATTAAAAGAGAAGATATATTTAAGAGAAGATAATAAATGAATATTTGATTCTCCTATATTTAAGGAATCCCTCTATTTATCTCCAAGATATAAAATAAGTTCCTCTTCTTTAGGGATCTTATATTTTTTTTAGAAGATACAAGTTGGGTTATATATGTTCTCTGAAGAGGATTGAAACGTGTGCGAAACGAAAGAAAAAAAAAAGAGGCTTGGGTGTTGATTACGAAGACTGATCTTCCGATTGGTAATTGAAGCGGCTGCGGTTGAAAAAGAAAGGTAGTTTATATCTTCTGGAGCAACATGACTACGTAATGTAGAGTCTTGAGGATGAGTAATATACAGAATGAGACTATGGTTAGTTTGATTAATGACTTAGTCATGCATACATTTAGGGGGAGCCGGATCATTTGACGCTGTCGATGGGAGTCTTCTTTATTCCAGGGGGAGCCTAGAGTTTGATGTTAATTCACAAGTGATATAGTTATAGTATTGAGATGTATACTTAAGCTATATTGATGTTTTGATGTTTATGGTGACCATTAATAAAATTACTCATTTGAGCTGTGCGTAGCTCCCCAGACGTAGCCAGACGTAGGCAATATTGGCCGAACTGGGTCACCAAAGTCTCATGTGTTATTCTCTTCTGTTGTCTCACTAGTTATTACGTACATTATTAGCTGCAGTCGTAACTGAAGGGTCCTTGATTATCTTCACGCCGAAATATATAATTTTGAACGAAATTTTATAATCAACTAAATAGTTCATAGAAAAACGATATTTAGAATAATCACAGAAACCAGAAAAACTAAGATGATATCAACAAAGCAGTATACACGATCTTGATTGTCCAAGATGACAAGAAGAGAAACGATGTTATCGAAGATAATGAATATCAGAGCGAATGTTGTCGAAAATTATGAAAAATAAATCAGAATAGCTCGAATGATCCAGATGAAAGATATATAAAAGATGAGATGAATAACTCGGAAACGACGATCGTGAAAAAATCGGAAAGAAGAAGAAAATCAGATTTGAAAGATCGTTATAAAAGATTAAGGGTAAATAAGGAATTCTGAAAAAATAATTTGCTTTAATGGAATTGTTACAGGACCGTAAATAG

mRNA sequence

ATGTTGGGTCGTTTGGGGTCAAGGTTCTCTAGTCTGCTACTTCACCTAAATGGAGCGGTGCTTACTGCATCTGATGCTCCTGAACATGAACCTAAGACAATTGCACTTAGCTACAGACTCTTTCAAGGCAATCATGTGCTTGATATTGACCATGATGTGCATCCAACTCGAGGCCCACAGGTTGATGCTCTCATTCGAAATTTGAAGTCTTGGGCACTAACTACTAGTCGTCAGCAGCCACCATCTGGGGGAGCCGGATCATTTGACGCTGTCGATGGGAGTCTTCTTTATTCCAGGGGGAGCCTAGAGTTTGATGTTAATTCACAAAATAGCTCGAATGATCCAGATGAAAGATATATAAAAGATGAGATGAATAACTCGGAAACGACGATCGTGAAAAAATCGGAAAGAAGAAGAAAATCAGATTTGAAAGATCGTTATAAAAGATTAAGGGACCGTAAATAG

Coding sequence (CDS)

ATGTTGGGTCGTTTGGGGTCAAGGTTCTCTAGTCTGCTACTTCACCTAAATGGAGCGGTGCTTACTGCATCTGATGCTCCTGAACATGAACCTAAGACAATTGCACTTAGCTACAGACTCTTTCAAGGCAATCATGTGCTTGATATTGACCATGATGTGCATCCAACTCGAGGCCCACAGGTTGATGCTCTCATTCGAAATTTGAAGTCTTGGGCACTAACTACTAGTCGTCAGCAGCCACCATCTGGGGGAGCCGGATCATTTGACGCTGTCGATGGGAGTCTTCTTTATTCCAGGGGGAGCCTAGAGTTTGATGTTAATTCACAAAATAGCTCGAATGATCCAGATGAAAGATATATAAAAGATGAGATGAATAACTCGGAAACGACGATCGTGAAAAAATCGGAAAGAAGAAGAAAATCAGATTTGAAAGATCGTTATAAAAGATTAAGGGACCGTAAATAG

Protein sequence

MLGRLGSRFSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGPQVDALIRNLKSWALTTSRQQPPSGGAGSFDAVDGSLLYSRGSLEFDVNSQNSSNDPDERYIKDEMNNSETTIVKKSERRRKSDLKDRYKRLRDRK

Homology

[Close]

BLAST of MELO3C033266.2 vs. NCBI nr
Match: XP_008442272.1 (PREDICTED: uncharacterized protein LOC103486179 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 7.7e-22
Identity = 63/102 (61.76%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGPQ-------- 68
           FSSLLLHLN AVLTA+DAP  EPKTI LS+RLFQG+HV DIDHDVHPTR P+        
Sbjct: 465 FSSLLLHLNRAVLTATDAPGPEPKTITLSHRLFQGSHVPDIDHDVHPTRDPRILTLLTGM 524

Query: 69  ---------VDALIRNLKSWALTTSRQQPPSGGAGSFDAVDG 94
                    VDALIR+LKS A +TSRQQPPSG     + V G
Sbjct: 525 SLLKASIWIVDALIRHLKSSAPSTSRQQPPSGNVLCREIVHG 566

[Close]

BLAST of MELO3C033266.2 vs. NCBI nr
Match: XP_008459273.1 (PREDICTED: uncharacterized protein LOC103498450 [Cucumis melo])

HSP 1 Score: 105.5 bits (262), Expect = 1.6e-19
Identity = 61/117 (52.14%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGP--------- 68
           FSSLLLHLNGAVLTASDAP  EPK I +SYRLFQG+HV DIDHDVHPTRGP         
Sbjct: 410 FSSLLLHLNGAVLTASDAPGPEPKKIVVSYRLFQGSHVPDIDHDVHPTRGPRIFDTTEGF 469

Query: 69  ---------------------------------QVDALIRNLKSWALTTSRQQPPSG 84
                                            +VD LIR+LKS   +TSRQQPPSG
Sbjct: 470 YVDRELATRIINSLTVESRALTNSITLLSERRLEVDDLIRHLKSSTPSTSRQQPPSG 526

[Close]

BLAST of MELO3C033266.2 vs. NCBI nr
Match: XP_008462770.1 (PREDICTED: uncharacterized protein LOC103501057 [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 5.2e-18
Identity = 60/123 (48.78%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGP--------- 68
           FSSLLLH NGAVLTA+DAPE EPKTIA SYRLFQG+HV DIDHDVHP  GP         
Sbjct: 404 FSSLLLHFNGAVLTATDAPEPEPKTIAFSYRLFQGSHVPDIDHDVHPNCGPRIFDTTDWD 463

Query: 69  ---------------------------------------QVDALIRNLKSWALTTSRQQP 84
                                                  +VDALIR+ KS A +TSRQQP
Sbjct: 464 ESAEGFYVDRELAARIVNSLIVESRALTNSINLLSKRRLEVDALIRHSKSLAPSTSRQQP 523

[Close]

BLAST of MELO3C033266.2 vs. NCBI nr
Match: XP_008460447.1 (PREDICTED: uncharacterized protein LOC103499259 [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 8.8e-18
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGPQV 62
           FSSLLLHLNGAVLTASDAP+ EPKTIALSYRLFQG+HV DIDHDVHPTR P++
Sbjct: 145 FSSLLLHLNGAVLTASDAPKPEPKTIALSYRLFQGSHVPDIDHDVHPTRSPRI 197

[Close]

BLAST of MELO3C033266.2 vs. NCBI nr
Match: XP_008451642.1 (PREDICTED: uncharacterized protein LOC103492875 [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGPQV 62
           FSSLLLHLNGAVLTASDAP  EPKTIALSYR+FQG+HV DIDHDVHPT+GP +
Sbjct: 339 FSSLLLHLNGAVLTASDAPGPEPKTIALSYRIFQGSHVPDIDHDVHPTQGPHI 391

[Close]

BLAST of MELO3C033266.2 vs. TrEMBL
Match: tr|A0A1S3B5B5|A0A1S3B5B5_CUCME (uncharacterized protein LOC103486179 OS=Cucumis melo OX=3656 GN=LOC103486179 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.1e-22
Identity = 63/102 (61.76%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGPQ-------- 68
           FSSLLLHLN AVLTA+DAP  EPKTI LS+RLFQG+HV DIDHDVHPTR P+        
Sbjct: 465 FSSLLLHLNRAVLTATDAPGPEPKTITLSHRLFQGSHVPDIDHDVHPTRDPRILTLLTGM 524

Query: 69  ---------VDALIRNLKSWALTTSRQQPPSGGAGSFDAVDG 94
                    VDALIR+LKS A +TSRQQPPSG     + V G
Sbjct: 525 SLLKASIWIVDALIRHLKSSAPSTSRQQPPSGNVLCREIVHG 566

[Close]

BLAST of MELO3C033266.2 vs. TrEMBL
Match: tr|A0A1S3CAC0|A0A1S3CAC0_CUCME (uncharacterized protein LOC103498450 OS=Cucumis melo OX=3656 GN=LOC103498450 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19
Identity = 61/117 (52.14%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGP--------- 68
           FSSLLLHLNGAVLTASDAP  EPK I +SYRLFQG+HV DIDHDVHPTRGP         
Sbjct: 410 FSSLLLHLNGAVLTASDAPGPEPKKIVVSYRLFQGSHVPDIDHDVHPTRGPRIFDTTEGF 469

Query: 69  ---------------------------------QVDALIRNLKSWALTTSRQQPPSG 84
                                            +VD LIR+LKS   +TSRQQPPSG
Sbjct: 470 YVDRELATRIINSLTVESRALTNSITLLSERRLEVDDLIRHLKSSTPSTSRQQPPSG 526

[Close]

BLAST of MELO3C033266.2 vs. TrEMBL
Match: tr|A0A1S3CHN1|A0A1S3CHN1_CUCME (uncharacterized protein LOC103501057 OS=Cucumis melo OX=3656 GN=LOC103501057 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.4e-18
Identity = 60/123 (48.78%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGP--------- 68
           FSSLLLH NGAVLTA+DAPE EPKTIA SYRLFQG+HV DIDHDVHP  GP         
Sbjct: 404 FSSLLLHFNGAVLTATDAPEPEPKTIAFSYRLFQGSHVPDIDHDVHPNCGPRIFDTTDWD 463

Query: 69  ---------------------------------------QVDALIRNLKSWALTTSRQQP 84
                                                  +VDALIR+ KS A +TSRQQP
Sbjct: 464 ESAEGFYVDRELAARIVNSLIVESRALTNSINLLSKRRLEVDALIRHSKSLAPSTSRQQP 523

[Close]

BLAST of MELO3C033266.2 vs. TrEMBL
Match: tr|A0A1S3CC22|A0A1S3CC22_CUCME (uncharacterized protein LOC103499259 OS=Cucumis melo OX=3656 GN=LOC103499259 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.8e-18
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGPQV 62
           FSSLLLHLNGAVLTASDAP+ EPKTIALSYRLFQG+HV DIDHDVHPTR P++
Sbjct: 145 FSSLLLHLNGAVLTASDAPKPEPKTIALSYRLFQGSHVPDIDHDVHPTRSPRI 197

[Close]

BLAST of MELO3C033266.2 vs. TrEMBL
Match: tr|A0A1S3BS17|A0A1S3BS17_CUCME (uncharacterized protein LOC103492875 OS=Cucumis melo OX=3656 GN=LOC103492875 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-17
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 9   FSSLLLHLNGAVLTASDAPEHEPKTIALSYRLFQGNHVLDIDHDVHPTRGPQV 62
           FSSLLLHLNGAVLTASDAP  EPKTIALSYR+FQG+HV DIDHDVHPT+GP +
Sbjct: 339 FSSLLLHLNGAVLTASDAPGPEPKTIALSYRIFQGSHVPDIDHDVHPTQGPHI 391

The following BLAST results are available for this feature:

BLAST of MELO3C033266.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442272.1	7.7e-22	61.76	PREDICTED: uncharacterized protein LOC103486179 [Cucumis melo]	[more]
XP_008459273.1	1.6e-19	52.14	PREDICTED: uncharacterized protein LOC103498450 [Cucumis melo]	[more]
XP_008462770.1	5.2e-18	48.78	PREDICTED: uncharacterized protein LOC103501057 [Cucumis melo]	[more]
XP_008460447.1	8.8e-18	86.79	PREDICTED: uncharacterized protein LOC103499259 [Cucumis melo]	[more]
XP_008451642.1	2.6e-17	84.91	PREDICTED: uncharacterized protein LOC103492875 [Cucumis melo]	[more]

BLAST of MELO3C033266.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C033266.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C033266.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B5B5\|A0A1S3B5B5_CUCME	5.1e-22	61.76	uncharacterized protein LOC103486179 OS=Cucumis melo OX=3656 GN=LOC103486179 PE=...	[more]
tr\|A0A1S3CAC0\|A0A1S3CAC0_CUCME	1.1e-19	52.14	uncharacterized protein LOC103498450 OS=Cucumis melo OX=3656 GN=LOC103498450 PE=...	[more]
tr\|A0A1S3CHN1\|A0A1S3CHN1_CUCME	3.4e-18	48.78	uncharacterized protein LOC103501057 OS=Cucumis melo OX=3656 GN=LOC103501057 PE=...	[more]
tr\|A0A1S3CC22\|A0A1S3CC22_CUCME	5.8e-18	86.79	uncharacterized protein LOC103499259 OS=Cucumis melo OX=3656 GN=LOC103499259 PE=...	[more]
tr\|A0A1S3BS17\|A0A1S3BS17_CUCME	1.7e-17	84.91	uncharacterized protein LOC103492875 OS=Cucumis melo OX=3656 GN=LOC103492875 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033266.2.1	MELO3C033266.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..154

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C033266.2	Cucumber (Gy14) v2	cgybmedB281
MELO3C033266.2	Cucumber (Gy14) v1	cgymedB013
MELO3C033266.2	Cucurbita maxima (Rimu)	cmamedB708
MELO3C033266.2	Cucurbita maxima (Rimu)	cmamedB911
MELO3C033266.2	Cucurbita moschata (Rifu)	cmomedB699
MELO3C033266.2	Cucurbita moschata (Rifu)	cmomedB899
MELO3C033266.2	Cucurbita pepo (Zucchini)	cpemedB085
MELO3C033266.2	Cucurbita pepo (Zucchini)	cpemedB536
MELO3C033266.2	Wild cucumber (PI 183967)	cpimedB315
MELO3C033266.2	Cucumber (Chinese Long) v2	cumedB313
MELO3C033266.2	Bottle gourd (USVL1VR-Ls)	lsimedB166
MELO3C033266.2	Watermelon (Charleston Gray)	medwcgB530
MELO3C033266.2	Silver-seed gourd	carmedB0200
MELO3C033266.2	Cucumber (Chinese Long) v3	cucmedB322
MELO3C033266.2	Watermelon (97103) v2	medwmbB535
MELO3C033266.2	Wax gourd	medwgoB649