MELO3C033072.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C033072.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionChloride channel protein
Locationchr08 : 21081449 .. 21081694 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTATGTGCATCATCATGGTTTAAATTTCAAACAATTTGAAATTTTTACCTCTCATCATGCTTGTACTTTTGATGTCCAAGATAAGTTAACAAATTGAAAATTAAAATTTTAACCGTTCAACAAGTTTATTTCCACGTGAGAGTGTGTTATGTATATAATCACTTCAAGCTGTTGGTGATGCCTTTAATGAAGGCGTGTATTAAGACCAAGCCCAATTGAAGGGTATTCCATTACTGAAATGA

mRNA sequence

ATGCGTATGTGCATCATCATGGTTTAAATTTCAAACAATTTGAAATTTTTACCTCTCATCATGCTTGTACTTTTGATGTCCAAGGCTGTTGGTGATGCCTTTAATGAAGGCGTGTATTAAGACCAAGCCCAATTGAAGGGTATTCCATTACTGAAATGA

Coding sequence (CDS)

ATGCTTGTACTTTTGATGTCCAAGGCTGTTGGTGATGCCTTTAATGAAGGCGTGTATTAA

Protein sequence

MLVLLMSKAVGDAFNEGVY
Homology
[Close]
BLAST of MELO3C033072.2 vs. TAIR10
Match: AT5G26240.1 (chloride channel D)

HSP 1 Score: 37.7 bits (86), Expect = 9.2e-04
Identity = 17/19 (89.47%), Postives = 19/19 (100.00%), Query Frame = 0 

Query: 1   MLVLLMSKAVGDAFNEGVY 20
           MLVLL+SKAVGDAFNEG+Y
Sbjct: 544 MLVLLISKAVGDAFNEGLY 562

The following BLAST results are available for this feature:
BLAST of MELO3C033072.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033072.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G26240.19.2e-0489.47chloride channel D[more]
BLAST of MELO3C033072.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C033072.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006821 chloride transport
biological_process GO:0034220 ion transmembrane transport
biological_process GO:0006811 ion transport
biological_process GO:1903959 regulation of anion transmembrane transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005247 voltage-gated chloride channel activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033072.2.1MELO3C033072.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C033072.2Cucumber (Gy14) v2cgybmedB285
MELO3C033072.2Cucumber (Gy14) v1cgymedB577
MELO3C033072.2Cucurbita maxima (Rimu)cmamedB698
MELO3C033072.2Cucurbita maxima (Rimu)cmamedB909
MELO3C033072.2Cucurbita moschata (Rifu)cmomedB689
MELO3C033072.2Cucurbita moschata (Rifu)cmomedB897
MELO3C033072.2Cucurbita pepo (Zucchini)cpemedB095
MELO3C033072.2Cucurbita pepo (Zucchini)cpemedB533
MELO3C033072.2Wild cucumber (PI 183967)cpimedB324
MELO3C033072.2Cucumber (Chinese Long) v2cumedB321
MELO3C033072.2Bottle gourd (USVL1VR-Ls)lsimedB159
MELO3C033072.2Watermelon (Charleston Gray)medwcgB522
MELO3C033072.2Watermelon (97103) v1medwmB574
MELO3C033072.2Silver-seed gourdcarmedB0298
MELO3C033072.2Silver-seed gourdcarmedB0858
MELO3C033072.2Cucumber (Chinese Long) v3cucmedB329
MELO3C033072.2Watermelon (97103) v2medwmbB526
MELO3C033072.2Wax gourdmedwgoB667