MELO3C033021.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C033021.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionserine/threonine-protein phosphatase 7 long form homolog isoform X2
Locationchr08 : 17551341 .. 17551547 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAATTTTGTTGACATAGTACAAACTTTCTCTGTGGAACACGATATAAAAGCTTTAGGGCACATATGTGACAGAACCACAGAACGCGTAGAACACATTATTCAGCAGACTCGACGACTTACTGTTGCCGACACAGATCGTAGACGCATGCGATGTAGACGATGACGGCAAGGCGATGATGTCGTAGAGGGTGATGAGGATAATTGA

mRNA sequence

TATAATTTTGTTGACATAGTACAAACTTTCTCTGTGGAACACGATATAAAAGCTTTAGGGCACATATGTGACAGAACCACAGAACGCGTAGAACACATTATTCAGCAGACTCGACGACTTACTGTTGCCGACACAGATCGTAGACGCATGCGATGTAGACGATGACGGCAAGGCGATGATGTCGTAGAGGGTGATGAGGATAATTGA

Coding sequence (CDS)

TATAATTTTGTTGACATAGTACAAACTTTCTCTGTGGAACACGATATAAAAGCTTTAGGGCACATATGTGACAGAACCACAGAACGCGTAGAACACATTATTCAGCAGACTCGACGACTTACTGTTGCCGACACAGATCGTAGACGCATGCGATGTAGACGATGA

Protein sequence

YNFVDIVQTFSVEHDIKALGHICDRTTERVEHIIQQTRRLTVADTDRRRMRCRR
Homology
[Close]
BLAST of MELO3C033021.2 vs. NCBI nr
Match: XP_008459571.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-07
Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 2   NFVDIVQTFSVEHDIKALGHICDRTTERVEHIIQQTRRLTVADTDRRRMR 52
           NFV  V+ +S+EH+++ LG +CD+  E +EHIIQQT+RL VADTDRR +R
Sbjct: 431 NFVQDVRAYSMEHNLQDLGSMCDQFLENIEHIIQQTKRLNVADTDRRCIR 480

[Close]
BLAST of MELO3C033021.2 vs. NCBI nr
Match: XP_016902435.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-07
Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 2   NFVDIVQTFSVEHDIKALGHICDRTTERVEHIIQQTRRLTVADTDRRRMR 52
           NFV  V+ +S+EH+++ LG +CD+  E +EHIIQQT+RL VADTDRR +R
Sbjct: 449 NFVQDVRAYSMEHNLQDLGSMCDQFLENIEHIIQQTKRLNVADTDRRCIR 498

[Close]
BLAST of MELO3C033021.2 vs. TrEMBL
Match: tr|A0A1S4E383|A0A1S4E383_CUCME (serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.2e-07
Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 2   NFVDIVQTFSVEHDIKALGHICDRTTERVEHIIQQTRRLTVADTDRRRMR 52
           NFV  V+ +S+EH+++ LG +CD+  E +EHIIQQT+RL VADTDRR +R
Sbjct: 449 NFVQDVRAYSMEHNLQDLGSMCDQFLENIEHIIQQTKRLNVADTDRRCIR 498

[Close]
BLAST of MELO3C033021.2 vs. TrEMBL
Match: tr|A0A1S3CBQ7|A0A1S3CBQ7_CUCME (serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.2e-07
Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 2   NFVDIVQTFSVEHDIKALGHICDRTTERVEHIIQQTRRLTVADTDRRRMR 52
           NFV  V+ +S+EH+++ LG +CD+  E +EHIIQQT+RL VADTDRR +R
Sbjct: 431 NFVQDVRAYSMEHNLQDLGSMCDQFLENIEHIIQQTKRLNVADTDRRCIR 480

The following BLAST results are available for this feature:
BLAST of MELO3C033021.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008459571.19.3e-0758.00PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [... [more]
XP_016902435.19.3e-0758.00PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [... [more]
BLAST of MELO3C033021.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C033021.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C033021.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E383|A0A1S4E383_CUCME6.2e-0758.00serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis m... [more]
tr|A0A1S3CBQ7|A0A1S3CBQ7_CUCME6.2e-0758.00serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis m... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033021.2.1MELO3C033021.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C033021.2Cucumber (Gy14) v2cgybmedB281
MELO3C033021.2Cucumber (Gy14) v1cgymedB605
MELO3C033021.2Cucurbita maxima (Rimu)cmamedB701
MELO3C033021.2Cucurbita maxima (Rimu)cmamedB708
MELO3C033021.2Cucurbita maxima (Rimu)cmamedB908
MELO3C033021.2Cucurbita moschata (Rifu)cmomedB691
MELO3C033021.2Cucurbita moschata (Rifu)cmomedB699
MELO3C033021.2Cucurbita moschata (Rifu)cmomedB898
MELO3C033021.2Cucurbita pepo (Zucchini)cpemedB094
MELO3C033021.2Cucurbita pepo (Zucchini)cpemedB085
MELO3C033021.2Cucurbita pepo (Zucchini)cpemedB534
MELO3C033021.2Wild cucumber (PI 183967)cpimedB315
MELO3C033021.2Cucumber (Chinese Long) v2cumedB313
MELO3C033021.2Bottle gourd (USVL1VR-Ls)lsimedB166
MELO3C033021.2Watermelon (Charleston Gray)medwcgB530
MELO3C033021.2Watermelon (97103) v1medwmB568
MELO3C033021.2Silver-seed gourdcarmedB0199
MELO3C033021.2Silver-seed gourdcarmedB0200
MELO3C033021.2Silver-seed gourdcarmedB0299
MELO3C033021.2Cucumber (Chinese Long) v3cucmedB322
MELO3C033021.2Watermelon (97103) v2medwmbB535
MELO3C033021.2Wax gourdmedwgoB649