MELO3C033006.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C033006.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Locationchr08 : 16246542 .. 16247110 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCTACTGATTATTCCATTCCAAAAGAGATTGTGCATAAGGCTCATACAAATCTTGGAGTTAATATAAGTTATTAGAAAGCTTGGAGGTCAAAAGAAGACATAGTAAAGATATTAAAAGGTGACACAATTGAATCGTATATGTTGATTCCAAGCTTCTTTGATAAATTGGTTGAATCTAACCTAGGTATGATCTGTTTCATATATCATATTTAAATTCATTTGCAGATAGATGATGATAGACAAATGTCATAGTCTATCTAGATTGACAAATATCACAAGCTATCTAGATAGAAAAATATTAGCATTTATCACAGCCTATCTAGATAGACAAATATTAGCATTTATCACAGTCTATCTAGATAGACACATATTAGCATCTATCACAGTCTATATGTTCTTTTTTGTTGGTGCTGATAGAAATGTTTTGTAATTATTATAGGTACATGCAATGCTTTAGAAATGGATGATAGCGGTCATTTCAAGTTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAAACCTATCATTTTTGTTGATGGAATGCTTTTGAAG

mRNA sequence

TGTCTACTGATTATTCCATTCCAAAAGAGATTGTGCATAAGGCTCATACAAATCTTGGAGTTAATATAAGTTATTAGAAAGCTTGGAGGTCAAAAGAAGACATAGTAAAGATATTAAAAGGTGACACAATTGAATCGTATATGTTGATTCCAAGCTTCTTTGATAAATTGGTTGAATCTAACCTAGAAATGGATGATAGCGGTCATTTCAAGTTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAAACCTATCATTTTTGTTGATGGAATGCTTTTGAAG

Coding sequence (CDS)

ATGTTGATTCCAAGCTTCTTTGATAAATTGGTTGAATCTAACCTAGAAATGGATGATAGCGGTCATTTCAAGTTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAAACCTATCATTTTTGTTGATGGAATGCTTTTGAAG

Protein sequence

MLIPSFFDKLVESNLEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLLK
BLAST of MELO3C033006.2 vs. NCBI nr
Match: XP_016901943.1 (PREDICTED: uncharacterized protein LOC107991486 [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-09
Identity = 34/57 (59.65%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 2  LIPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLLK 53
          LIP+FF KL E N       E D  GHFK+CFMA GA IEGWKYC+P I VD   LK
Sbjct: 14 LIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLK 70

BLAST of MELO3C033006.2 vs. NCBI nr
Match: XP_022895272.1 (uncharacterized protein LOC111409458 [Olea europaea var. sylvestris])

HSP 1 Score: 65.1 bits (157), Expect = 8.1e-08
Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 0

Query: 3   IPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLL 52
           IP+FF  L ++N      LE+D    FK+CFMA G SI GWKYCKP++ VDG  L
Sbjct: 295 IPAFFSVLQQTNPGSVTCLEIDGHNRFKYCFMALGTSIRGWKYCKPVVVVDGTYL 349

BLAST of MELO3C033006.2 vs. NCBI nr
Match: XP_022872609.1 (uncharacterized protein LOC111391594 [Olea europaea var. sylvestris])

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0

Query: 3   IPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLL 52
           IP+FF  L ++N      LE+D    FK+CFMA GASI GWK+C+PI+ VDG  L
Sbjct: 270 IPAFFSVLQQTNPGSVTSLEIDGHNRFKYCFMALGASIRGWKHCRPIVVVDGTYL 324

BLAST of MELO3C033006.2 vs. NCBI nr
Match: XP_022852353.1 (uncharacterized protein LOC111373987 [Olea europaea var. sylvestris])

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-07
Identity = 29/56 (51.79%), Postives = 36/56 (64.29%), Query Frame = 0

Query: 2   LIPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLL 52
           L+PS+F  L + N      +E D    FK+CFMA GASI GWKYC+P+I VDG  L
Sbjct: 295 LLPSYFFMLQQMNIGTITRIETDHLDRFKYCFMALGASIGGWKYCRPVIVVDGTYL 350

BLAST of MELO3C033006.2 vs. NCBI nr
Match: XP_022841956.1 (uncharacterized protein LOC111365648 [Olea europaea var. sylvestris])

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-07
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0

Query: 3   IPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLL 52
           IPSFF  + + N      LE+D    FK+CFMA GASI+GW++C+P+I VDG  L
Sbjct: 269 IPSFFYMIRQRNPGTVTELEVDSQNRFKYCFMALGASIQGWQHCRPVIVVDGTYL 323

BLAST of MELO3C033006.2 vs. TrEMBL
Match: tr|A0A1S4E145|A0A1S4E145_CUCME (uncharacterized protein LOC107991486 OS=Cucumis melo OX=3656 GN=LOC107991486 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.9e-09
Identity = 34/57 (59.65%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 2  LIPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLLK 53
          LIP+FF KL E N       E D  GHFK+CFMA GA IEGWKYC+P I VD   LK
Sbjct: 14 LIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLK 70

BLAST of MELO3C033006.2 vs. TrEMBL
Match: tr|A0A1S3C300|A0A1S3C300_CUCME (uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-05
Identity = 26/57 (45.61%), Postives = 34/57 (59.65%), Query Frame = 0

Query: 2   LIPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLLK 53
           ++ +F D L+ +N       E DD G FKF FMA  ASI+ W YC P+I VDG  +K
Sbjct: 284 MLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISVDGAAMK 340

BLAST of MELO3C033006.2 vs. TrEMBL
Match: tr|A0A1S4E392|A0A1S4E392_CUCME (uncharacterized protein LOC107991824 OS=Cucumis melo OX=3656 GN=LOC107991824 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-05
Identity = 26/57 (45.61%), Postives = 34/57 (59.65%), Query Frame = 0

Query: 2   LIPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLLK 53
           ++ +F D L+ +N       E DD G FKF FMA  ASI+ W YC P+I VDG  +K
Sbjct: 50  MLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISVDGAAMK 106

BLAST of MELO3C033006.2 vs. TrEMBL
Match: tr|U5D175|U5D175_AMBTC (Uncharacterized protein (Fragment) OS=Amborella trichopoda OX=13333 GN=AMTR_s04652p00001680 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-05
Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 0

Query: 2   LIPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLLK 53
           L+P F   L ++N      +E +D   FK+ F+A  ASI+GWK CKPII VDG  LK
Sbjct: 255 LLPGFLHMLQKTNPGTIVHMETEDDNSFKYLFVALDASIKGWKKCKPIIVVDGTFLK 311

BLAST of MELO3C033006.2 vs. TrEMBL
Match: tr|A0A1S4E0D5|A0A1S4E0D5_CUCME (uncharacterized protein LOC107991253 OS=Cucumis melo OX=3656 GN=LOC107991253 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-05
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 1   MLIPSFFDKLVESN------LEMDDSGHFKFCFMAFGASIEGWKYCKPIIFVDGMLLK 53
           +++ +F D L+ +N       E DD G FKF FMA   SI+ W YC P+I VDG  +K
Sbjct: 208 VMLSTFSDALIRNNPGTYTAKEADDEGRFKFYFMALATSIDAWNYCVPVISVDGATMK 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016901943.14.3e-0959.65PREDICTED: uncharacterized protein LOC107991486 [Cucumis melo][more]
XP_022895272.18.1e-0852.73uncharacterized protein LOC111409458 [Olea europaea var. sylvestris][more]
XP_022872609.11.8e-0752.73uncharacterized protein LOC111391594 [Olea europaea var. sylvestris][more]
XP_022852353.15.3e-0751.79uncharacterized protein LOC111373987 [Olea europaea var. sylvestris][more]
XP_022841956.15.3e-0750.91uncharacterized protein LOC111365648 [Olea europaea var. sylvestris][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4E145|A0A1S4E145_CUCME2.9e-0959.65uncharacterized protein LOC107991486 OS=Cucumis melo OX=3656 GN=LOC107991486 PE=... [more]
tr|A0A1S3C300|A0A1S3C300_CUCME2.5e-0545.61uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=... [more]
tr|A0A1S4E392|A0A1S4E392_CUCME2.5e-0545.61uncharacterized protein LOC107991824 OS=Cucumis melo OX=3656 GN=LOC107991824 PE=... [more]
tr|U5D175|U5D175_AMBTC2.5e-0547.37Uncharacterized protein (Fragment) OS=Amborella trichopoda OX=13333 GN=AMTR_s046... [more]
tr|A0A1S4E0D5|A0A1S4E0D5_CUCME4.3e-0543.10uncharacterized protein LOC107991253 OS=Cucumis melo OX=3656 GN=LOC107991253 PE=... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033006.2.1MELO3C033006.2.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None