MELO3C032999.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032999.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionHomogentisate phytyltransferase 2
Locationchr08 : 15740885 .. 15741410 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGATAAAACTTAGGAATAAGTTTTATGTTGAGTATAGAGAGGGAGTGACCCAATTTTTATAAGTTTCCAAGTTTCACGTTGATGCCTACGTAAGAATAAGGTGTCTATGCAAGAGATGTATGAACTCAAATTGGAACTCATTAGAGGGTGTGGAACGACATCTACTTACTATTAGAATATCCCCCTACTACACAAAATGAGTGTACCATGGAGAGTCAGTTAGCTTTAGAGGTACAGAAAACTTTGATGAAGGAACTACTAGTAACCCTTTAGATGAAGGAACTAGTAGTACTCACTTTCATGAAGAAGATGATATGTTTGGTATGCTGAATGATTTACAAGTCTTAGTTGAACATGAACAGAAAATAGAGGAATGTCGCTTGGAGGATGAAATGTCAAGGAATATTGGGGTAGATATAGAACAAGATACAACAAATATATTTCAAGACTTATTGAATAAAGCATGTAATGAGTTGTACCCTAGTTGTTCTAAATTTTCCTCCTTAAATTTTTTTATTAAGTTGA

mRNA sequence

TGGATAAAACTTAGGAATAAGTTTTATGTTGAGTATAGAGAGGGAGTGACCCAATTTTTATAAGTTTCCAAGTTTCACGTTGATGCCTACGTAAGAATAAGGTGTCTATGCAAGAGATGTATGAACTCAAATTGGAACTCATTAGAGGGTGTGGAACGACATCTACTTACTATTAGAATATCCCCCTACTACACAAAATGAGTGTACCATGGAGAGTCAGTTAGCTTTAGAGGTACAGAAAACTTTGATGAAGGAACTACTAGTAACCCTTTAGATGAAGGAACTAGTAGTACTCACTTTCATGAAGAAGATGATATGTTTGGTATGCTGAATGATTTACAAGTCTTAGTTGAACATGAACAGAAAATAGAGGAATGTCGCTTGGAGGATGAAATGTCAAGGAATATTGGGGTAGATATAGAACAAGATACAACAAATATATTTCAAGACTTATTGAATAAAGCATGTAATGAGTTGTACCCTAGTTGTTCTAAATTTTCCTCCTTAAATTTTTTTATTAAGTTGA

Coding sequence (CDS)

ATGTTTGGTATGCTGAATGATTTACAAGTCTTAGTTGAACATGAACAGAAAATAGAGGAATGTCGCTTGGAGGATGAAATGTCAAGGAATATTGGGGTAGATATAGAACAAGATACAACAAATATATTTCAAGACTTATTGAATAAAGCATGTAATGAGTTGTACCCTAGTTGTTCTAAATTTTCCTCCTTAAATTTTTTTATTAAGTTG

Protein sequence

MFGMLNDLQVLVEHEQKIEECRLEDEMSRNIGVDIEQDTTNIFQDLLNKACNELYPSCSKFSSLNFFIKL
Homology
[Close]
BLAST of MELO3C032999.2 vs. NCBI nr
Match: XP_008455800.1 (PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo])

HSP 1 Score: 52.4 bits (124), Expect = 7.3e-04
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 0 

Query: 4   MLNDLQ--VLVEHEQKIEECRLEDEMSRNIGVDIEQDTTNIFQDLLNKACNELYPSCSKF 63
           +L DLQ  ++   E   +    +DE+  ++    E +T+N+F++L+N+A N LYP C+KF
Sbjct: 93  LLTDLQGSMIAREENFDDGDGFDDEVPEDVD---EINTSNVFEELMNEARNPLYPGCTKF 152

Query: 64  SSLNFFIKL 71
           SSLNF +KL
Sbjct: 153 SSLNFLVKL 158

[Close]
BLAST of MELO3C032999.2 vs. TrEMBL
Match: tr|A0A1S3C1V3|A0A1S3C1V3_CUCME (uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.9e-04
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 0 

Query: 4   MLNDLQ--VLVEHEQKIEECRLEDEMSRNIGVDIEQDTTNIFQDLLNKACNELYPSCSKF 63
           +L DLQ  ++   E   +    +DE+  ++    E +T+N+F++L+N+A N LYP C+KF
Sbjct: 93  LLTDLQGSMIAREENFDDGDGFDDEVPEDVD---EINTSNVFEELMNEARNPLYPGCTKF 152

Query: 64  SSLNFFIKL 71
           SSLNF +KL
Sbjct: 153 SSLNFLVKL 158

The following BLAST results are available for this feature:
BLAST of MELO3C032999.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455800.17.3e-0440.58PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo][more]
BLAST of MELO3C032999.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C032999.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C032999.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C1V3|A0A1S3C1V3_CUCME4.9e-0440.58uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0016740 transferase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032999.2.1MELO3C032999.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C032999.2Cucurbita maxima (Rimu)cmamedB911
MELO3C032999.2Cucurbita moschata (Rifu)cmomedB899
MELO3C032999.2Cucurbita pepo (Zucchini)cpemedB536
MELO3C032999.2Watermelon (Charleston Gray)medwcgB535
MELO3C032999.2Watermelon (97103) v2medwmbB541