MELO3C032912.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032912.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionKinesin-like protein KIN-12D
Locationchr08 : 2303927 .. 2304148 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGTGGTACATTACGTATCTCCACATCCTCCACACGGTCTCGCAACCCGTCTCCTTCCAATGCTCTAAGAACATCAGACTTGTCATCCTCAGTGACATCAACCACACCCTTTGGTTTTGGAGTATCCAGTTCATCCATTTGGATCTCCACCACCTTTGCTCTTCTCAAGACTTTCGCAGTTTCATCAGTGTCCCCTTTTGTTCTAAGGGGCAAGTGA

mRNA sequence

ATGAATGGTGGTACATTACGTATCTCCACATCCTCCACACGGTCTCGCAACCCGTCTCCTTCCAATGCTCTAAGAACATCAGACTTGTCATCCTCAGTGACATCAACCACACCCTTTGGTTTTGGAGTATCCAGTTCATCCATTTGGATCTCCACCACCTTTGCTCTTCTCAAGACTTTCGCAGTTTCATCAGTGTCCCCTTTTGTTCTAAGGGGCAAGTGA

Coding sequence (CDS)

ATGAATGGTGGTACATTACGTATCTCCACATCCTCCACACGGTCTCGCAACCCGTCTCCTTCCAATGCTCTAAGAACATCAGACTTGTCATCCTCAGTGACATCAACCACACCCTTTGGTTTTGGAGTATCCAGTTCATCCATTTGGATCTCCACCACCTTTGCTCTTCTCAAGACTTTCGCAGTTTCATCAGTGTCCCCTTTTGTTCTAAGGGGCAAGTGA

Protein sequence

MNGGTLRISTSSTRSRNPSPSNALRTSDLSSSVTSTTPFGFGVSSSSIWISTTFALLKTFAVSSVSPFVLRGK
Homology
[Close]
BLAST of MELO3C032912.2 vs. NCBI nr
Match: KGN49163.1 (hypothetical protein Csa_6G516710 [Cucumis sativus])

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-04
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 1  MNGGTLRISTSSTRSRNPSPSNALRTSDLSSSVTSTT 38
          M+ GTLRISTSST SR  SPSNALRTSDLSSSVTSTT
Sbjct: 1  MSDGTLRISTSSTGSRKSSPSNALRTSDLSSSVTSTT 37

[Close]
BLAST of MELO3C032912.2 vs. TrEMBL
Match: tr|A0A0A0KHY6|A0A0A0KHY6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516710 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-04
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 1  MNGGTLRISTSSTRSRNPSPSNALRTSDLSSSVTSTT 38
          M+ GTLRISTSST SR  SPSNALRTSDLSSSVTSTT
Sbjct: 1  MSDGTLRISTSSTGSRKSSPSNALRTSDLSSSVTSTT 37

The following BLAST results are available for this feature:
BLAST of MELO3C032912.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49163.15.9e-0486.49hypothetical protein Csa_6G516710 [Cucumis sativus][more]
BLAST of MELO3C032912.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C032912.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C032912.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KHY6|A0A0A0KHY6_CUCSA3.9e-0486.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516710 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0007018 microtubule-based movement
biological_process GO:0000281 mitotic cytokinesis
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0005871 kinesin complex
cellular_component GO:0005874 microtubule
cellular_component GO:0009524 phragmoplast
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032912.2.1MELO3C032912.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C032912.2Cucumber (Gy14) v2cgybmedB072
MELO3C032912.2Cucumber (Gy14) v2cgybmedB442
MELO3C032912.2Cucurbita maxima (Rimu)cmamedB233
MELO3C032912.2Cucumber (Gy14) v1cgymedB025
MELO3C032912.2Cucumber (Gy14) v1cgymedB095
MELO3C032912.2Cucumber (Gy14) v1cgymedB247
MELO3C032912.2Cucurbita maxima (Rimu)cmamedB046
MELO3C032912.2Cucurbita maxima (Rimu)cmamedB158
MELO3C032912.2Cucurbita maxima (Rimu)cmamedB441
MELO3C032912.2Cucurbita maxima (Rimu)cmamedB519
MELO3C032912.2Cucurbita maxima (Rimu)cmamedB564
MELO3C032912.2Cucurbita maxima (Rimu)cmamedB667
MELO3C032912.2Cucurbita maxima (Rimu)cmamedB694
MELO3C032912.2Cucurbita maxima (Rimu)cmamedB897
MELO3C032912.2Cucurbita moschata (Rifu)cmomedB037
MELO3C032912.2Cucurbita moschata (Rifu)cmomedB147
MELO3C032912.2Cucurbita moschata (Rifu)cmomedB217
MELO3C032912.2Cucurbita moschata (Rifu)cmomedB428
MELO3C032912.2Cucurbita moschata (Rifu)cmomedB507
MELO3C032912.2Cucurbita moschata (Rifu)cmomedB552
MELO3C032912.2Cucurbita moschata (Rifu)cmomedB657
MELO3C032912.2Cucurbita moschata (Rifu)cmomedB686
MELO3C032912.2Cucurbita moschata (Rifu)cmomedB886
MELO3C032912.2Cucurbita pepo (Zucchini)cpemedB053
MELO3C032912.2Cucurbita pepo (Zucchini)cpemedB091
MELO3C032912.2Cucurbita pepo (Zucchini)cpemedB540
MELO3C032912.2Cucurbita pepo (Zucchini)cpemedB773
MELO3C032912.2Cucurbita pepo (Zucchini)cpemedB841
MELO3C032912.2Wild cucumber (PI 183967)cpimedB076
MELO3C032912.2Wild cucumber (PI 183967)cpimedB496
MELO3C032912.2Wild cucumber (PI 183967)cpimedB560
MELO3C032912.2Cucumber (Chinese Long) v2cumedB077
MELO3C032912.2Cucumber (Chinese Long) v2cumedB254
MELO3C032912.2Cucumber (Chinese Long) v2cumedB486
MELO3C032912.2Cucumber (Chinese Long) v2cumedB541
MELO3C032912.2Melon (DHL92) v3.6.1medmedB074
MELO3C032912.2Melon (DHL92) v3.6.1medmedB099
MELO3C032912.2Bottle gourd (USVL1VR-Ls)lsimedB126
MELO3C032912.2Bottle gourd (USVL1VR-Ls)lsimedB156
MELO3C032912.2Watermelon (Charleston Gray)medwcgB510
MELO3C032912.2Watermelon (Charleston Gray)medwcgB514
MELO3C032912.2Watermelon (Charleston Gray)medwcgB519
MELO3C032912.2Watermelon (97103) v1medwmB544
MELO3C032912.2Watermelon (97103) v1medwmB550
MELO3C032912.2Watermelon (97103) v1medwmB561
MELO3C032912.2Watermelon (97103) v1medwmB582
MELO3C032912.2Silver-seed gourdcarmedB0035
MELO3C032912.2Silver-seed gourdcarmedB0652
MELO3C032912.2Silver-seed gourdcarmedB0875
MELO3C032912.2Silver-seed gourdcarmedB0925
MELO3C032912.2Cucumber (Chinese Long) v3cucmedB085
MELO3C032912.2Cucumber (Chinese Long) v3cucmedB508
MELO3C032912.2Cucumber (Chinese Long) v3cucmedB576
MELO3C032912.2Watermelon (97103) v2medwmbB507
MELO3C032912.2Watermelon (97103) v2medwmbB514
MELO3C032912.2Watermelon (97103) v2medwmbB524
MELO3C032912.2Wax gourdmedwgoB641