MELO3C032714.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C032714.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr07 : 14320252 .. 14320788 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTACCTAGCTGAAGTTCCCGACTCCATCTGCTTCTTGGAGTCCCGTCTCGAAGAGATTGCTGAGAAAACTGACACAATCGATGCGGTAGCTGGCCGTGTCGAAGGATTACCAATACAAGAGTTGTTGGCAAGAGTTGACACTCTAGAAGGAAACGTTGGAAGAATTGTTAACTACGAATATGGGGACAGTTTTTCGGGCCTTGTTTCCCACATGGAAGAACGTGCCAATGAGCTAGATAGTTCCCAGAAGACACTCTTAGAGATGATAAACGTCATGTCGGAGGATTTTCGAGTCACCCTCGATGTCATCAGAAATGAAATCGTAGATGTGAACGCGAGACTGAATCTCACAGTGCAAGAGATGCAAAGCCCTTCTGTAGGACAAGAGATGCAAGGGCCCTGGAGAACTATATTTTTGACCTCGAACAACACTTCAGGGCCACGAACAAAGTTACTGAGGAAGTCAAAGTTACACTGGCAATGTTGTACGATAGATACTTGGGATGCCTTAAAGAAAGAACTCCGCTCATAA

mRNA sequence

ATGCTCTACCTAGCTGAAGTTCCCGACTCCATCTGCTTCTTGGAGTCCCGTCTCGAAGAGATTGCTGAGAAAACTGACACAATCGATGCGGTAGCTGGCCGTGTCGAAGGATTACCAATACAAGAGTTGTTGGCAAGAGTTGACACTCTAGAAGGAAACGTTGGAAGAATTGTTAACTACGAATATGGGGACAGTTTTTCGGGCCTTGTTTCCCACATGGAAGAACGTGCCAATGAGCTAGATAGTTCCCAGAAGACACTCTTAGAGATGATAAACGTCATGTCGGAGGATTTTCGAGTCACCCTCGATGTCATCAGAAATGAAATCGTAGATGTGAACGCGAGACTGAATCTCACAGTGCAAGAGATGCAAAGCCCTTCTGTAGGACAAGAGATGCAAGGGCCCTGGAGAACTATATTTTTGACCTCGAACAACACTTCAGGGCCACGAACAAAGTTACTGAGGAAGTCAAAGTTACACTGGCAATGTTGTACGATAGATACTTGGGATGCCTTAAAGAAAGAACTCCGCTCATAA

Coding sequence (CDS)

ATGCTCTACCTAGCTGAAGTTCCCGACTCCATCTGCTTCTTGGAGTCCCGTCTCGAAGAGATTGCTGAGAAAACTGACACAATCGATGCGGTAGCTGGCCGTGTCGAAGGATTACCAATACAAGAGTTGTTGGCAAGAGTTGACACTCTAGAAGGAAACGTTGGAAGAATTGTTAACTACGAATATGGGGACAGTTTTTCGGGCCTTGTTTCCCACATGGAAGAACGTGCCAATGAGCTAGATAGTTCCCAGAAGACACTCTTAGAGATGATAAACGTCATGTCGGAGGATTTTCGAGTCACCCTCGATGTCATCAGAAATGAAATCGTAGATGTGAACGCGAGACTGAATCTCACAGTGCAAGAGATGCAAAGCCCTTCTGTAGGACAAGAGATGCAAGGGCCCTGGAGAACTATATTTTTGACCTCGAACAACACTTCAGGGCCACGAACAAAGTTACTGAGGAAGTCAAAGTTACACTGGCAATGTTGTACGATAGATACTTGGGATGCCTTAAAGAAAGAACTCCGCTCATAA

Protein sequence

MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNYEYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTVQEMQSPSVGQEMQGPWRTIFLTSNNTSGPRTKLLRKSKLHWQCCTIDTWDALKKELRS
BLAST of MELO3C032714.2 vs. NCBI nr
Match: XP_022154605.1 (uncharacterized protein LOC111021829 [Momordica charantia])

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 74/218 (33.94%), Postives = 115/218 (52.75%), Query Frame = 0

Query: 1   MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
           +LYL EVPDS+  LE+R++E +EK   IDAV  RV+GLPIQ++  RV+T E    R  ++
Sbjct: 22  LLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLPIQDIAMRVETXESKATRPGSF 81

Query: 61  EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
           E GDS +   + +E R  EL++S  T++++ N M+EDF+VT+D +R E+ +++ R+NLT+
Sbjct: 82  ERGDSSTNPNTQIEVRMGELNNSHSTMMQLFNEMTEDFKVTIDTLRAEMTEISTRVNLTM 141

Query: 121 QEMQSPSVGQEMQG----------PWR---------------TIFLTSNNTSGPRTK--- 178
           + + + +  Q   G          P+                  +     T     K   
Sbjct: 142 RAVGNQAPNQXNMGFNKLKVPEPKPFNGNRXXKDLENFXFDVEQYFKXTGTXSEXMKVTL 201

BLAST of MELO3C032714.2 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-22
Identity = 72/218 (33.03%), Postives = 116/218 (53.21%), Query Frame = 0

Query: 1   MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
           +LYL EVPD +  LE+R++E +EK   IDAV  R++GLPIQ++  RV+TLE    R  ++
Sbjct: 22  LLYLREVPDFLRLLEARVDEFSEKFGEIDAVNARIDGLPIQDIAMRVETLESKATRPGSF 81

Query: 61  EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
           E GDS +   + +E R  EL++S   ++++ N M+EDF+VT+D +R E+ +++ R+NLT+
Sbjct: 82  ERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFKVTIDTLRAEMTEISTRVNLTM 141

Query: 121 QEMQSPSVGQEMQG----------PWR---------------TIFLTSNNTSGPRTK--- 178
           + + + +  Q   G          P+                  +  +  T+    K   
Sbjct: 142 RAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVTL 201

BLAST of MELO3C032714.2 vs. NCBI nr
Match: XP_022981546.1 (uncharacterized protein LOC111480631 [Cucurbita maxima] >XP_022981547.1 uncharacterized protein LOC111480631 [Cucurbita maxima])

HSP 1 Score: 113.6 bits (283), Expect = 6.8e-22
Identity = 74/219 (33.79%), Postives = 117/219 (53.42%), Query Frame = 0

Query: 1   MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
           +LY  EV D +  LES + EIA K D I+ + GR+E + ++EL+ RV+TLE     +  +
Sbjct: 22  LLYSNEVLDRMKLLESCMNEIAIKADKINEMTGRLEAMSVRELMIRVETLEEKAATVGGF 81

Query: 61  EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
           EYGDS +G V+ MEER  +L  +Q+T+++M++ MS+  R T+ V++ E+ D+N +LNLT 
Sbjct: 82  EYGDSSTGFVARMEERIEDLKDNQQTIVQMVSEMSKGLRATIGVVKAEVADLNTKLNLTT 141

Query: 121 QEM--QSPSVG------------------QEMQGPWRTIF-----LTSNNTSGPRTK--- 179
           + +  Q+P  G                  ++ +     IF       + NT     K   
Sbjct: 142 RAVGNQTPVGGVIQYIKLKVPEPKPFCGDRDAKALENFIFDFEQYFRATNTVAEEMKVTV 201

BLAST of MELO3C032714.2 vs. NCBI nr
Match: XP_022940258.1 (uncharacterized protein LOC111445936 [Cucurbita moschata] >XP_022940259.1 uncharacterized protein LOC111445936 [Cucurbita moschata] >XP_022940260.1 uncharacterized protein LOC111445936 [Cucurbita moschata])

HSP 1 Score: 110.9 bits (276), Expect = 4.4e-21
Identity = 72/219 (32.88%), Postives = 117/219 (53.42%), Query Frame = 0

Query: 1   MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
           +LY  EV D +  LES + EIA K D I+ +  R+E + +QEL+ RV+TLE     +  +
Sbjct: 22  LLYSNEVLDRMKLLESCMNEIATKADKINEMTCRLEAMSVQELMIRVETLEEKAATVGGF 81

Query: 61  EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
           EYGDS +  V+ MEER  +L+ +Q+T+++M++ MS+  R T+ V++ E+ D+N +LN+T+
Sbjct: 82  EYGDSSTDFVARMEERIEDLNDNQQTIVQMVSEMSKGMRATIGVVKAEVADLNTKLNVTM 141

Query: 121 Q--EMQSPSVG------------------QEMQGPWRTIF-----LTSNNTSGPRTK--- 179
           +  E Q+P  G                  ++ +     IF       + NT     K   
Sbjct: 142 RAVENQTPVGGVIQYIKLKVPEPKPFCGDRDAKALENFIFDFEQYFRATNTVAEEMKVTV 201

BLAST of MELO3C032714.2 vs. NCBI nr
Match: XP_023525752.1 (uncharacterized protein LOC111789266 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108.2 bits (269), Expect = 2.9e-20
Identity = 71/219 (32.42%), Postives = 117/219 (53.42%), Query Frame = 0

Query: 1   MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
           +LY  EV D +  LES + EIA K D I+ +  R+E + ++EL+ RV+TLE     +  +
Sbjct: 22  LLYSNEVLDRMKLLESCMNEIATKADKINEMTCRLEAMSVRELMIRVETLEEKAATVGGF 81

Query: 61  EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
           EYGDS +  V+ MEER  +L+ +Q+T+++M++ MS+  R T+ V++ E+ D+N +LN+T+
Sbjct: 82  EYGDSSTDFVARMEERIEDLNDNQQTIVQMVSEMSKGLRATIGVVKAEVADLNTKLNVTM 141

Query: 121 QEM--QSPSVG------------------QEMQGPWRTIF-----LTSNNTSGPRTK--- 179
           + +  Q+P  G                  ++ +     IF       + NT     K   
Sbjct: 142 RAVGNQTPVGGVIQYIKLKVPEPKPFCGDRDAKALENFIFDFEQYFRATNTVVEEMKVTV 201

BLAST of MELO3C032714.2 vs. TrEMBL
Match: tr|A0A2P6QT29|A0A2P6QT29_ROSCH (Putative nucleotidyltransferase, Ribonuclease H OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0401341 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.2e-04
Identity = 53/215 (24.65%), Postives = 91/215 (42.33%), Query Frame = 0

Query: 4   LAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNYEYG 63
           LA VPD       RL +I +  D +D        + ++ L  RV  LE    R    E  
Sbjct: 21  LAGVPD-------RLIDITKVLDRVDLDELAARMIEVESLKDRVVALERCKARGSGRERN 80

Query: 64  DSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTVQEM 123
           +  + + +   E+   +  +  TL   ++ M+ED R T+D  RNE+V+++A+LNLT++ M
Sbjct: 81  EEETPVPN---EQMGAMSDALDTLQVTVDNMAEDVRATIDAFRNELVEMSAKLNLTIRAM 140

Query: 124 QSPSV----------------------------------------GQEMQGPWRTIFLTS 179
            +  V                                         +E++    T++L+ 
Sbjct: 141 GNQPVTDYRKVKIPEPQAFGGARDAKELENYLFDMEQYFRAVKPDSEEVKVNMATMYLSG 200

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022154605.11.1e-2233.94uncharacterized protein LOC111021829 [Momordica charantia][more]
XP_022150099.11.8e-2233.03uncharacterized protein LOC111018360 [Momordica charantia][more]
XP_022981546.16.8e-2233.79uncharacterized protein LOC111480631 [Cucurbita maxima] >XP_022981547.1 uncharac... [more]
XP_022940258.14.4e-2132.88uncharacterized protein LOC111445936 [Cucurbita moschata] >XP_022940259.1 unchar... [more]
XP_023525752.12.9e-2032.42uncharacterized protein LOC111789266 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A2P6QT29|A0A2P6QT29_ROSCH7.2e-0424.65Putative nucleotidyltransferase, Ribonuclease H OS=Rosa chinensis OX=74649 GN=Rc... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032714.2.1MELO3C032714.2.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None