MELO3C032554.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032554.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	S-adenosylmethionine-dependent methyltransferase
Location	chr07 : 20780493 .. 20780684 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATGGAGTATTTTAAATCTGTTGAAGGTGGTCTTTTAGTGGATGCAAGCTGTGGTAGTGGTTTGTTTTCCAGAAAATTTGCAATATCTTGATCCTTCTCAGGTGTAATTGCTCTTGATTTCTCTAAGAATATGCTTCTTCAATGTTATGACTTCATTAAGAAAGATGTTACTCTCTTGAATAGGTAA

mRNA sequence

ATGGCCATGGAGTATTTTAAATCTGTTGAAGGTGGTCTTTTAGTGGATGCAAGCTGTGGTAGTGGTTTGTTTTCCAGAAAATTTGCAATATCTTGATCCTTCTCAGGTGTAATTGCTCTTGATTTCTCTAAGAATATGCTTCTTCAATGTTATGACTTCATTAAGAAAGATGTTACTCTCTTGAATAGGTAA

Coding sequence (CDS)

ATGGCCATGGAGTATTTTAAATCTGTTGAAGGTGGTCTTTTAGTGGATGCAAGCTGTGGTAGTGGTTTGTTTTCCAGAAAATTTGCAATATCTTGA

Protein sequence

MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS

Homology

[Close]

BLAST of MELO3C032554.2 vs. NCBI nr
Match: XP_004139262.1 (PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 4.1e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MAMEYFKSVEGGLLVDASCGSGLFSRKFA S
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKS 192

[Close]

BLAST of MELO3C032554.2 vs. NCBI nr
Match: XP_008456627.1 (PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 4.1e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MAMEYFKSVEGGLLVDASCGSGLFSRKFA S
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKS 192

[Close]

BLAST of MELO3C032554.2 vs. NCBI nr
Match: XP_008456635.1 (PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 4.1e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MAMEYFKSVEGGLLVDASCGSGLFSRKFA S
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKS 192

[Close]

BLAST of MELO3C032554.2 vs. NCBI nr
Match: XP_011648726.1 (PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X1 [Cucumis sativus] >KGN60753.1 hypothetical protein Csa_2G009410 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 4.1e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MAMEYFKSVEGGLLVDASCGSGLFSRKFA S
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKS 192

[Close]

BLAST of MELO3C032554.2 vs. NCBI nr
Match: XP_022142970.1 (uncharacterized methyltransferase At2g41040, chloroplastic [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-06
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MAMEYFKS EGGLLVDASCGSGLFSRKFA S
Sbjct: 161 MAMEYFKSAEGGLLVDASCGSGLFSRKFAKS 191

[Close]

BLAST of MELO3C032554.2 vs. TAIR10
Match: AT2G41040.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-08
Identity = 26/31 (83.87%), Postives = 26/31 (83.87%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MA EYFK  EGGLLVD SCGSGLFSRKFA S
Sbjct: 175 MAEEYFKEAEGGLLVDVSCGSGLFSRKFAQS 205

[Close]

BLAST of MELO3C032554.2 vs. TAIR10
Match: AT1G78140.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 41.2 bits (95), Expect = 1.4e-04
Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MA  Y K V GG ++DASCGSG+FSR F  S
Sbjct: 173 MAKAYLKPVLGGNIIDASCGSGMFSRLFTRS 203

[Close]

BLAST of MELO3C032554.2 vs. Swiss-Prot
Match: sp|Q0WPT7|Y2104_ARATH (Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g41040 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.1e-07
Identity = 26/31 (83.87%), Postives = 26/31 (83.87%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MA EYFK  EGGLLVD SCGSGLFSRKFA S
Sbjct: 175 MAEEYFKEAEGGLLVDVSCGSGLFSRKFAQS 205

[Close]

BLAST of MELO3C032554.2 vs. TrEMBL
Match: tr|A0A1S3C4D9|A0A1S3C4D9_CUCME (uncharacterized methyltransferase At2g41040, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496525 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.7e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MAMEYFKSVEGGLLVDASCGSGLFSRKFA S
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKS 192

[Close]

BLAST of MELO3C032554.2 vs. TrEMBL
Match: tr|A0A1S3C3A2|A0A1S3C3A2_CUCME (uncharacterized methyltransferase At2g41040, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496525 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.7e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MAMEYFKSVEGGLLVDASCGSGLFSRKFA S
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKS 192

[Close]

BLAST of MELO3C032554.2 vs. TrEMBL
Match: tr|A0A0A0LG50|A0A0A0LG50_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009410 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.7e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MAMEYFKSVEGGLLVDASCGSGLFSRKFA S
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKS 192

[Close]

BLAST of MELO3C032554.2 vs. TrEMBL
Match: tr|A0A2N9FWH4|A0A2N9FWH4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19332 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 8.7e-06
Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 1  MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
          MA EYFKS EGGLLVD SCGSGLFSRKFA S
Sbjct: 46 MAQEYFKSAEGGLLVDVSCGSGLFSRKFAQS 76

[Close]

BLAST of MELO3C032554.2 vs. TrEMBL
Match: tr|A0A067EW59|A0A067EW59_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019950mg PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-05
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 1   MAMEYFKSVEGGLLVDASCGSGLFSRKFAIS 32
           MA EYFKS +GGLLVD SCGSGLFSRKFA S
Sbjct: 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS 187

The following BLAST results are available for this feature:

BLAST of MELO3C032554.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139262.1	4.1e-07	96.77	PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X2...	[more]
XP_008456627.1	4.1e-07	96.77	PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X1...	[more]
XP_008456635.1	4.1e-07	96.77	PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X2...	[more]
XP_011648726.1	4.1e-07	96.77	PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X1...	[more]
XP_022142970.1	1.2e-06	93.55	uncharacterized methyltransferase At2g41040, chloroplastic [Momordica charantia]	[more]

BLAST of MELO3C032554.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41040.1	1.2e-08	83.87	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT1G78140.1	1.4e-04	61.29	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

BLAST of MELO3C032554.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0WPT7\|Y2104_ARATH	2.1e-07	83.87	Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of MELO3C032554.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C4D9\|A0A1S3C4D9_CUCME	2.7e-07	96.77	uncharacterized methyltransferase At2g41040, chloroplastic isoform X2 OS=Cucumis...	[more]
tr\|A0A1S3C3A2\|A0A1S3C3A2_CUCME	2.7e-07	96.77	uncharacterized methyltransferase At2g41040, chloroplastic isoform X1 OS=Cucumis...	[more]
tr\|A0A0A0LG50\|A0A0A0LG50_CUCSA	2.7e-07	96.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009410 PE=4 SV=1	[more]
tr\|A0A2N9FWH4\|A0A2N9FWH4_FAGSY	8.7e-06	87.10	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19332 PE=4 SV=1	[more]
tr\|A0A067EW59\|A0A067EW59_CITSI	1.9e-05	83.87	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019950mg PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0032259	methylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032554.2.1	MELO3C032554.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C032554.2	Cucumber (Gy14) v2	cgybmedB268
MELO3C032554.2	Cucumber (Gy14) v1	cgymedB451
MELO3C032554.2	Cucurbita maxima (Rimu)	cmamedB351
MELO3C032554.2	Cucurbita maxima (Rimu)	cmamedB508
MELO3C032554.2	Cucurbita maxima (Rimu)	cmamedB786
MELO3C032554.2	Cucurbita maxima (Rimu)	cmamedB790
MELO3C032554.2	Cucurbita moschata (Rifu)	cmomedB337
MELO3C032554.2	Cucurbita moschata (Rifu)	cmomedB496
MELO3C032554.2	Cucurbita moschata (Rifu)	cmomedB785
MELO3C032554.2	Cucurbita moschata (Rifu)	cmomedB787
MELO3C032554.2	Cucurbita pepo (Zucchini)	cpemedB239
MELO3C032554.2	Cucurbita pepo (Zucchini)	cpemedB491
MELO3C032554.2	Cucurbita pepo (Zucchini)	cpemedB495
MELO3C032554.2	Cucurbita pepo (Zucchini)	cpemedB647
MELO3C032554.2	Wild cucumber (PI 183967)	cpimedB303
MELO3C032554.2	Cucumber (Chinese Long) v2	cumedB299
MELO3C032554.2	Bottle gourd (USVL1VR-Ls)	lsimedB345
MELO3C032554.2	Bottle gourd (USVL1VR-Ls)	lsimedB474
MELO3C032554.2	Watermelon (Charleston Gray)	medwcgB481
MELO3C032554.2	Watermelon (97103) v1	medwmB495
MELO3C032554.2	Silver-seed gourd	carmedB0043
MELO3C032554.2	Silver-seed gourd	carmedB0048
MELO3C032554.2	Silver-seed gourd	carmedB0325
MELO3C032554.2	Silver-seed gourd	carmedB0662
MELO3C032554.2	Cucumber (Chinese Long) v3	cucmedB309
MELO3C032554.2	Watermelon (97103) v2	medwmbB484
MELO3C032554.2	Wax gourd	medwgoB582
MELO3C032554.2	Wax gourd	medwgoB604