MELO3C032542.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032542.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionsubtilisin-like protease SBT3.17 isoform X1
Locationchr07 : 6645740 .. 6646165 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGATGGAAACGAGGACTTTCTGCCCGTGTACAGCCAGGGAGTTGACATCTTGCAGGACGATGTACGTGCATCTCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGATGTAGAAGCTATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCAGCACGGAACCTTGCAAATGACAACCACGTGCGCACGAAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGAGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGATTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

mRNA sequence

ATGGGGGATGGAAACGAGGACTTTCTGCCCGTGTACAGCCAGGGAGTTGACATCTTGCAGGACGATGTACGTGCATCTCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGATGTAGAAGCTATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCAGCACGGAACCTTGCAAATGACAACCACGTGCGCACGAAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGAGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGATTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

Coding sequence (CDS)

ATGGGGGATGGAAACGAGGACTTTCTGCCCGTGTACAGCCAGGGAGTTGACATCTTGCAGGACGATGTACGTGCATCTCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGATGTAGAAGCTATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCAGCACGGAACCTTGCAAATGACAACCACGTGCGCACGAAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGAGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGATTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

Protein sequence

MGDGNEDFLPVYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTKFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Homology
[Close]
BLAST of MELO3C032542.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 244.6 bits (623), Expect = 2.0e-61
Identity = 125/141 (88.65%), Postives = 127/141 (90.07%), Query Frame = 0 

Query: 1   MGDGNEDFLPVYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLAL 60
           MGDGNEDF PVYS+GVDILQDDVRASRPS             RKRGSQRDFDVEAIHLAL
Sbjct: 483 MGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLAL 542

Query: 61  DQTNEQLRQIAEWPARNLANDNHVRTKFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 120
           DQTNEQLRQIAEWPARNLANDNHVRT+FFRILREMPELTSLDRALLQRHLLSRMDDLRGF
Sbjct: 543 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 602

Query: 121 VLMPEDEREGFCRVLLRDIER 142
           VLMPEDEREGFCRVLLRDIER
Sbjct: 603 VLMPEDEREGFCRVLLRDIER 623

[Close]
BLAST of MELO3C032542.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16
Identity = 53/140 (37.86%), Postives = 88/140 (62.86%), Query Frame = 0 

Query: 1   MGDGNEDFLP-VYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLA 60
           +GD +++ +P +YSQGV +  D++   R  +ASE R  SS SKRKRGS+R   VE I   
Sbjct: 166 LGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSV 225

Query: 61  LDQTNEQLRQIAEWPARNLANDNHVRTKFFRILREMPELTSLDRALLQRHLLSRMDDLRG 120
           ++  NEQL+ IA+WP    A +  +R +  + L+++P+L S DRA L + L   ++ + G
Sbjct: 226 MEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEG 285

Query: 121 FVLMPEDEREGFCRVLLRDI 140
           F+ +P + +  +C +LL++I
Sbjct: 286 FLSIPTELKLEYCNILLQNI 305

[Close]
BLAST of MELO3C032542.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 95.1 bits (235), Expect = 2.0e-16
Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = 0 

Query: 7   DFLPVYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQ 66
           DF P+YS G+++  DD+  +R +R SE R  SSGSKRKR        + +  A++  NEQ
Sbjct: 524 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 583

Query: 67  LRQIAEWPARNLANDNHVRTKFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPED 126
           L +IAEWP     +    R +  R L  +PELT +DR  L R L+  +DD++ F+ +P+ 
Sbjct: 584 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDH 643

Query: 127 EREGFCRVLLRD 139
            +  +C ++L++
Sbjct: 644 MKYPYCSLILQE 655

[Close]
BLAST of MELO3C032542.2 vs. NCBI nr
Match: XP_016900897.1 (PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 7.1e-14
Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 0 

Query: 1   MGDGNE-DFLPVYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLA 60
           M D N+ +F  +YSQ + + QDDVRASRP   S+ RTGSSGSK+KR SQ + ++E IH+A
Sbjct: 46  MSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQKRESQWEGEIEMIHMA 105

Query: 61  LDQTNEQLRQIAEWPARNLANDNHV 85
           L+  N+QLR I EW AR LAND  V
Sbjct: 106 LECANDQLRTIVEWSARALANDTTV 130

[Close]
BLAST of MELO3C032542.2 vs. NCBI nr
Match: KGN46631.1 (hypothetical protein Csa_6G116150 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-12
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 0 

Query: 11  VYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQI 70
           +YSQG+D+  D++  +R S  SEGR  SSGSKRK G Q    V+ I   ++  N+QL+ I
Sbjct: 1   MYSQGLDMPPDEMLGTRQS--SEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAI 60

Query: 71  AEWPARNLANDNHVRTKFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREG 130
           A W     A +  +  +  + L+++ EL + DR  L + +   +DD+ GF+  P   +  
Sbjct: 61  ANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCPTKLKLE 120

Query: 131 FCRVLLRD 139
           +CRVLL D
Sbjct: 121 YCRVLLED 126

[Close]
BLAST of MELO3C032542.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-61
Identity = 125/141 (88.65%), Postives = 127/141 (90.07%), Query Frame = 0 

Query: 1   MGDGNEDFLPVYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLAL 60
           MGDGNEDF PVYS+GVDILQDDVRASRPS             RKRGSQRDFDVEAIHLAL
Sbjct: 483 MGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLAL 542

Query: 61  DQTNEQLRQIAEWPARNLANDNHVRTKFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 120
           DQTNEQLRQIAEWPARNLANDNHVRT+FFRILREMPELTSLDRALLQRHLLSRMDDLRGF
Sbjct: 543 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 602

Query: 121 VLMPEDEREGFCRVLLRDIER 142
           VLMPEDEREGFCRVLLRDIER
Sbjct: 603 VLMPEDEREGFCRVLLRDIER 623

[Close]
BLAST of MELO3C032542.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16
Identity = 53/140 (37.86%), Postives = 88/140 (62.86%), Query Frame = 0 

Query: 1   MGDGNEDFLP-VYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLA 60
           +GD +++ +P +YSQGV +  D++   R  +ASE R  SS SKRKRGS+R   VE I   
Sbjct: 166 LGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSV 225

Query: 61  LDQTNEQLRQIAEWPARNLANDNHVRTKFFRILREMPELTSLDRALLQRHLLSRMDDLRG 120
           ++  NEQL+ IA+WP    A +  +R +  + L+++P+L S DRA L + L   ++ + G
Sbjct: 226 MEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEG 285

Query: 121 FVLMPEDEREGFCRVLLRDI 140
           F+ +P + +  +C +LL++I
Sbjct: 286 FLSIPTELKLEYCNILLQNI 305

[Close]
BLAST of MELO3C032542.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16
Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = 0 

Query: 7   DFLPVYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQ 66
           DF P+YS G+++  DD+  +R +R SE R  SSGSKRKR        + +  A++  NEQ
Sbjct: 524 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 583

Query: 67  LRQIAEWPARNLANDNHVRTKFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPED 126
           L +IAEWP     +    R +  R L  +PELT +DR  L R L+  +DD++ F+ +P+ 
Sbjct: 584 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDH 643

Query: 127 EREGFCRVLLRD 139
            +  +C ++L++
Sbjct: 644 MKYPYCSLILQE 655

[Close]
BLAST of MELO3C032542.2 vs. TrEMBL
Match: tr|A0A1S4DY48|A0A1S4DY48_CUCME (uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.7e-14
Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 0 

Query: 1   MGDGNE-DFLPVYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLA 60
           M D N+ +F  +YSQ + + QDDVRASRP   S+ RTGSSGSK+KR SQ + ++E IH+A
Sbjct: 46  MSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQKRESQWEGEIEMIHMA 105

Query: 61  LDQTNEQLRQIAEWPARNLANDNHV 85
           L+  N+QLR I EW AR LAND  V
Sbjct: 106 LECANDQLRTIVEWSARALANDTTV 130

[Close]
BLAST of MELO3C032542.2 vs. TrEMBL
Match: tr|A0A0A0KFW0|A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 0 

Query: 11  VYSQGVDILQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQI 70
           +YSQG+D+  D++  +R S  SEGR  SSGSKRK G Q    V+ I   ++  N+QL+ I
Sbjct: 1   MYSQGLDMPPDEMLGTRQS--SEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAI 60

Query: 71  AEWPARNLANDNHVRTKFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREG 130
           A W     A +  +  +  + L+++ EL + DR  L + +   +DD+ GF+  P   +  
Sbjct: 61  ANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCPTKLKLE 120

Query: 131 FCRVLLRD 139
           +CRVLL D
Sbjct: 121 YCRVLLED 126

The following BLAST results are available for this feature:
BLAST of MELO3C032542.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33754.12.0e-6188.65retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008441954.11.5e-1637.86PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo][more]
ADN34114.12.0e-1637.12retrotransposon protein [Cucumis melo subsp. melo][more]
XP_016900897.17.1e-1456.47PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 P... [more]
KGN46631.12.3e-1236.72hypothetical protein Csa_6G116150 [Cucumis sativus][more]
BLAST of MELO3C032542.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C032542.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C032542.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GBB2|E5GBB2_CUCME1.3e-6188.65Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3B4L3|A0A1S3B4L3_CUCME1.0e-1637.86uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
tr|E5GCB5|E5GCB5_CUCME1.3e-1637.12Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4DY48|A0A1S4DY48_CUCME4.7e-1456.47uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=... [more]
tr|A0A0A0KFW0|A0A0A0KFW0_CUCSA1.5e-1236.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032542.2.1MELO3C032542.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..49

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C032542.2Wax gourdmedwgoB602
MELO3C032542.2Cucumber (Gy14) v2cgybmedB275
MELO3C032542.2Cucumber (Gy14) v1cgymedB041
MELO3C032542.2Cucurbita maxima (Rimu)cmamedB035
MELO3C032542.2Cucurbita maxima (Rimu)cmamedB516
MELO3C032542.2Cucurbita moschata (Rifu)cmomedB025
MELO3C032542.2Cucurbita moschata (Rifu)cmomedB503
MELO3C032542.2Cucurbita pepo (Zucchini)cpemedB635
MELO3C032542.2Cucurbita pepo (Zucchini)cpemedB863
MELO3C032542.2Wild cucumber (PI 183967)cpimedB309
MELO3C032542.2Cucumber (Chinese Long) v2cumedB307
MELO3C032542.2Bottle gourd (USVL1VR-Ls)lsimedB340
MELO3C032542.2Watermelon (Charleston Gray)medwcgB455
MELO3C032542.2Watermelon (97103) v1medwmB529
MELO3C032542.2Silver-seed gourdcarmedB1024
MELO3C032542.2Watermelon (97103) v2medwmbB465