MELO3C032453.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032453.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Anthranilate synthase component I-2
Location	chr07 : 11891443 .. 11891619 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTTCAGGAGAAGCTTCAAATGATGCACTCAATTCTTGTCCACCATGTGCCACTTGGCCCGAACACAGTTCGTGTGTGGGTTGATACAATGAAAATACCAAATTCCTTCTTATGGAGGCCTACCTCTAACATTATTGTTATTGATGATGCTGTGGACACTACTACCGTAGAATGA

mRNA sequence

TTGGTTCAGGAGAAGCTTCAAATGATGCACTCAATTCTTGTCCACCATGTGCCACTTGGCCCGAACACAGTTCGTGTGTGGGTTGATACAATGAAAATACCAAATTCCTTCTTATGGAGGCCTACCTCTAACATTATTGTTATTGATGATGCTGTGGACACTACTACCGTAGAATGA

Coding sequence (CDS)

ATGATGCACTCAATTCTTGTCCACCATGTGCCACTTGGCCCGAACACAGTTCGTGTGTGGGTTGATACAATGAAAATACCAAATTCCTTCTTATGGAGGCCTACCTCTAACATTATTGTTATTGATGATGCTGTGGACACTACTACCGTAGAATGA

Protein sequence

MMHSILVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDTTTVE

Homology

[Close]

BLAST of MELO3C032453.2 vs. NCBI nr
Match: XP_022154305.1 (uncharacterized protein LOC111021601 isoform X1 [Momordica charantia])

HSP 1 Score: 78.6 bits (192), Expect = 7.0e-12
Identity = 33/45 (73.33%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 4   SILVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDTT 49
           S+LVHH+PLGPN VRVWVDT+K PNS+LWRPTS+++VID+A+ TT
Sbjct: 199 SVLVHHIPLGPNVVRVWVDTVKKPNSYLWRPTSDMMVIDNALGTT 243

[Close]

BLAST of MELO3C032453.2 vs. NCBI nr
Match: XP_022154306.1 (uncharacterized protein LOC111021601 isoform X2 [Momordica charantia])

HSP 1 Score: 78.6 bits (192), Expect = 7.0e-12
Identity = 33/45 (73.33%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 4   SILVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDTT 49
           S+LVHH+PLGPN VRVWVDT+K PNS+LWRPTS+++VID+A+ TT
Sbjct: 149 SVLVHHIPLGPNVVRVWVDTVKKPNSYLWRPTSDMMVIDNALGTT 193

[Close]

BLAST of MELO3C032453.2 vs. NCBI nr
Match: PRQ33597.1 (hypothetical protein RchiOBHm_Chr5g0059371 [Rosa chinensis])

HSP 1 Score: 65.1 bits (157), Expect = 8.0e-08
Identity = 26/45 (57.78%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 4  SILVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDTT 49
          ++LVH VPLGPN +RVWVDT+K+P + LWRP+S + +I+D + TT
Sbjct: 40 NMLVHFVPLGPNAMRVWVDTLKVPIASLWRPSSELEIIEDVISTT 84

[Close]

BLAST of MELO3C032453.2 vs. NCBI nr
Match: XP_022883204.1 (uncharacterized protein LOC111399957 [Olea europaea var. sylvestris])

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-07
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 5   ILVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDTT 49
           ILVHHVPLGPN  RVWVD    P++FLWRPT +I  I++ V TT
Sbjct: 95  ILVHHVPLGPNAARVWVDVAMKPDAFLWRPTCDITYIEECVGTT 138

[Close]

BLAST of MELO3C032453.2 vs. NCBI nr
Match: EXC10726.1 (Anthranilate synthase component I-2 [Morus notabilis])

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-07
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 6   LVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDT 48
           LVHHVPLGPN VR+WVD  K P++FLWRPTS +  I++A+ +
Sbjct: 210 LVHHVPLGPNAVRLWVDVAKQPDAFLWRPTSEMSTIEEAISS 251

[Close]

BLAST of MELO3C032453.2 vs. TrEMBL
Match: tr|A0A2P6QHF9|A0A2P6QHF9_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0059371 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.3e-08
Identity = 26/45 (57.78%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 4  SILVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDTT 49
          ++LVH VPLGPN +RVWVDT+K+P + LWRP+S + +I+D + TT
Sbjct: 40 NMLVHFVPLGPNAMRVWVDTLKVPIASLWRPSSELEIIEDVISTT 84

[Close]

BLAST of MELO3C032453.2 vs. TrEMBL
Match: tr|W9SIX0|W9SIX0_9ROSA (Anthranilate synthase component I-2 OS=Morus notabilis OX=981085 GN=L484_025310 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 9.0e-08
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 6   LVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDT 48
           LVHHVPLGPN VR+WVD  K P++FLWRPTS +  I++A+ +
Sbjct: 210 LVHHVPLGPNAVRLWVDVAKQPDAFLWRPTSEMSTIEEAISS 251

[Close]

BLAST of MELO3C032453.2 vs. TrEMBL
Match: tr|A0A2P6R8F1|A0A2P6R8F1_ROSCH (Putative transposase, Ptta/En/Spm, plant, transposase, Tnp1/En/Spm OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0460621 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-07
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 6   LVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDTT 49
           +VH VPLGPN +RVWVDT K+P + LWRP+S + +I+DA+ TT
Sbjct: 630 VVHFVPLGPNAMRVWVDTPKVPTASLWRPSSELEIIEDAIGTT 672

[Close]

BLAST of MELO3C032453.2 vs. TrEMBL
Match: tr|A0A2P6RGK8|A0A2P6RGK8_ROSCH (Putative transposase, Tnp1/En/Spm OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0492801 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-07
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 6   LVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDTT 49
           +VH VPLGPN +RVWVDT K+P + LWRP+S + +I+DA+ TT
Sbjct: 93  VVHFVPLGPNAMRVWVDTPKVPTASLWRPSSELEIIEDAIGTT 135

[Close]

BLAST of MELO3C032453.2 vs. TrEMBL
Match: tr|A0A1S4DZ27|A0A1S4DZ27_CUCME (uncharacterized protein LOC103493280 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493280 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-07
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 5   ILVHHVPLGPNTVRVWVDTMKIPNSFLWRPTSNIIVIDDAVDTT 49
           ++VHHVPLGP  VRVWVD  K P++FLWRP S +  + DAV +T
Sbjct: 897 VIVHHVPLGPQAVRVWVDLPKRPDAFLWRPNSEMTYVKDAVGST 940

The following BLAST results are available for this feature:

BLAST of MELO3C032453.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154305.1	7.0e-12	73.33	uncharacterized protein LOC111021601 isoform X1 [Momordica charantia]	[more]
XP_022154306.1	7.0e-12	73.33	uncharacterized protein LOC111021601 isoform X2 [Momordica charantia]	[more]
PRQ33597.1	8.0e-08	57.78	hypothetical protein RchiOBHm_Chr5g0059371 [Rosa chinensis]	[more]
XP_022883204.1	1.4e-07	63.64	uncharacterized protein LOC111399957 [Olea europaea var. sylvestris]	[more]
EXC10726.1	1.4e-07	61.90	Anthranilate synthase component I-2 [Morus notabilis]	[more]

BLAST of MELO3C032453.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C032453.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C032453.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P6QHF9\|A0A2P6QHF9_ROSCH	5.3e-08	57.78	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0059371 PE=4...	[more]
tr\|W9SIX0\|W9SIX0_9ROSA	9.0e-08	61.90	Anthranilate synthase component I-2 OS=Morus notabilis OX=981085 GN=L484_025310 ...	[more]
tr\|A0A2P6R8F1\|A0A2P6R8F1_ROSCH	1.2e-07	60.47	Putative transposase, Ptta/En/Spm, plant, transposase, Tnp1/En/Spm OS=Rosa chine...	[more]
tr\|A0A2P6RGK8\|A0A2P6RGK8_ROSCH	1.2e-07	60.47	Putative transposase, Tnp1/En/Spm OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g04...	[more]
tr\|A0A1S4DZ27\|A0A1S4DZ27_CUCME	3.4e-07	59.09	uncharacterized protein LOC103493280 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032453.2.1	MELO3C032453.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C032453.2	Cucumber (Chinese Long) v3	cucmedB080
MELO3C032453.2	Cucumber (Chinese Long) v3	cucmedB310
MELO3C032453.2	Watermelon (97103) v2	medwmbB472
MELO3C032453.2	Watermelon (97103) v2	medwmbB486
MELO3C032453.2	Wax gourd	medwgoB586
MELO3C032453.2	Wax gourd	medwgoB598
MELO3C032453.2	Cucumber (Gy14) v2	cgybmedB067
MELO3C032453.2	Cucumber (Gy14) v2	cgybmedB269
MELO3C032453.2	Cucumber (Gy14) v1	cgymedB162
MELO3C032453.2	Cucumber (Gy14) v1	cgymedB302
MELO3C032453.2	Cucurbita maxima (Rimu)	cmamedB232
MELO3C032453.2	Cucurbita maxima (Rimu)	cmamedB280
MELO3C032453.2	Cucurbita maxima (Rimu)	cmamedB502
MELO3C032453.2	Cucurbita moschata (Rifu)	cmomedB216
MELO3C032453.2	Cucurbita moschata (Rifu)	cmomedB266
MELO3C032453.2	Cucurbita moschata (Rifu)	cmomedB490
MELO3C032453.2	Cucurbita pepo (Zucchini)	cpemedB570
MELO3C032453.2	Cucurbita pepo (Zucchini)	cpemedB641
MELO3C032453.2	Cucurbita pepo (Zucchini)	cpemedB700
MELO3C032453.2	Wild cucumber (PI 183967)	cpimedB071
MELO3C032453.2	Wild cucumber (PI 183967)	cpimedB304
MELO3C032453.2	Cucumber (Chinese Long) v2	cumedB073
MELO3C032453.2	Cucumber (Chinese Long) v2	cumedB300
MELO3C032453.2	Melon (DHL92) v3.6.1	medmedB073
MELO3C032453.2	Bottle gourd (USVL1VR-Ls)	lsimedB236
MELO3C032453.2	Bottle gourd (USVL1VR-Ls)	lsimedB466
MELO3C032453.2	Watermelon (Charleston Gray)	medwcgB483
MELO3C032453.2	Watermelon (Charleston Gray)	medwcgB468
MELO3C032453.2	Watermelon (97103) v1	medwmB502
MELO3C032453.2	Watermelon (97103) v1	medwmB521