MELO3C032381.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032381.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionZf-CCHC domain-containing protein
Locationchr07 : 6203097 .. 6204516 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGCCAACTCCGTCAATCAACAGATAAATTGGGCCAATCTCACCTATGGAGATATTTCATCTACAGTTCAAATGATATGTGTTAATCTCTGCACAGAGAATAAACACACGACGAAGGTGATCAAAGATTCTGACTATAGTAAAGAACTGGGCACCTTCTGCAAACAATATGGTCTATCTCAAGGACCAAAGGAAGAAAAGAAGAAGAAAAAGAAAAGGTACTCTTCCAAAAACTTCTTTAGAAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTACGCCATAAGAACGGATGATGATACCTCCTCTCAAACGGAGTCTTCATCGGAGGAAGACTATATCAATATTCTTCAAGAAGAAGGGTCCTCTTCTGAAGAGAAATTCTACTCTCAAAGTGACTCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATGTCATCACCAAAGATCAAGAAACTCTTTTTGACCTCATCGAGCTGATCCCTGATGAAGAAGCAAAAAGAACTTGCCTCCTCAAATTAAAGCAAAGTTTAGAAGAACAAGTGCCTCAAAAGACGATTCAAAATCCGATTATGTATTCGTACCAAGACATACTGAATCGGGTaAAGGGCGAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAAAAATCCTCAAAAGAGAAGTTGCTGAAAACAAACAACAACTCATCTACCTTGAAAATGCATTTCAAGCCTTTTAA

mRNA sequence

ATGACAGCCAACTCCGTCAATCAACAGATAAATTGGGCCAATCTCACCTATGGAGATATTTCATCTACAGTTCAAATGATATGTGTTAATCTCTGCACAGAGAATAAACACACGACGAAGGTGATCAAAGATTCTGACTATAGTAAAGAACTGGGCACCTTCTGCAAACAATATGGTCTATCTCAAGGACCAAAGGAAGAAAAGAAGAAGAAAAAGAAAAGAACGGATGATGATACCTCCTCTCAAACGGAGTCTTCATCGGAGGAAGACTATATCAATATTCTTCAAGAAGAAGGGTCCTCTTCTGAAGAGAAATTCTACTCTCAAAGTGACTCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATGTCATCACCAAAGATCAAGAAACTCTTTTTGACCTCATCGAGCTGATCCCTGATGAAGAAGCAAAAAGAACTTGCCTCCTCAAATTAAAGCAAAGTTTAGAAGAACAAGTGCCTCAAAAGACGATTCAAAATCCGATTATGTATTCGTACCAAGACATACTGAATCGGGTaAAGGGCGAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAAAAATCCTCAAAAGAGAAGTTGCTGAAAACAAACAACAACTCATCTACCTTGAAAATGCATTTCAAGCCTTTTAA

Coding sequence (CDS)

ATGACAGCCAACTCCGTCAATCAACAGATAAATTGGGCCAATCTCACCTATGGAGATATTTCATCTACAGTTCAAATGATATGTGTTAATCTCTGCACAGAGAATAAACACACGACGAAGGTGATCAAAGATTCTGACTATAGTAAAGAACTGGGCACCTTCTGCAAACAATATGGTCTATCTCAAGGACCAAAGGAAGAAAAGAAGAAGAAAAAGAAAAGAACGGATGATGATACCTCCTCTCAAACGGAGTCTTCATCGGAGGAAGACTATATCAATATTCTTCAAGAAGAAGGGTCCTCTTCTGAAGAGAAATTCTACTCTCAAAGTGACTCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATGTCATCACCAAAGATCAAGAAACTCTTTTTGACCTCATCGAGCTGATCCCTGATGAAGAAGCAAAAAGAACTTGCCTCCTCAAATTAAAGCAAAGTTTAGAAGAACAAGTGCCTCAAAAGACGATTCAAAATCCGATTATGTATTCGTACCAAGACATACTGAATCGGGTaAAGGGCGAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAAAAATCCTCAAAAGAGAAGTTGCTGAAAACAAACAACAACTCATCTACCTTGAAAATGCATTTCAAGCCTTTTAA

Protein sequence

MTANSVNQQINWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYSKELGTFCKQYGLSQGPKEEKKKKKKRTDDDTSSQTESSSEEDYINILQEEGSSSEEKFYSQSDSSDDEGAIPCTGRCAGKCSGHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQQLIYLENAFQAF
Homology
[Close]
BLAST of MELO3C032381.2 vs. NCBI nr
Match: KGN65367.1 (hypothetical protein Csa_1G385030 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-43
Identity = 91/116 (78.45%), Postives = 103/116 (88.79%), Query Frame = 0 

Query: 117 GAIPCTGRCAGKCSGHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTI 176
           GAIPCT +CA    GHINVITKDQETLFDLIE IPDE AKRTCLLKL+QS+EEQ P++T+
Sbjct: 252 GAIPCTRQCA----GHINVITKDQETLFDLIEQIPDETAKRTCLLKLRQSIEEQTPRQTV 311

Query: 177 QNPIMYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQQLIYLENAFQAF 233
            +PIMYSYQ+ILNR+KGE K+PIQV DLHHEVKILK+EVA NKQ+L YLENAFQAF
Sbjct: 312 HSPIMYSYQNILNRIKGETKMPIQVNDLHHEVKILKKEVANNKQRLTYLENAFQAF 363

[Close]
BLAST of MELO3C032381.2 vs. NCBI nr
Match: XP_022151716.1 (uncharacterized protein LOC111019629 [Momordica charantia])

HSP 1 Score: 125.2 bits (313), Expect = 3.0e-25
Identity = 124/267 (46.44%), Postives = 143/267 (53.56%), Query Frame = 0 

Query: 1   MTANSVNQQINWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYSKELGTFCKQYGL 60
           +  NS   +I+WA LT GDI++T+Q ICVNLC ENKHT KVIK+ DY KELGTFCKQYGL
Sbjct: 334 VVTNSTTNRIDWAELTIGDINATIQQICVNLCLENKHTAKVIKEPDYRKELGTFCKQYGL 393

Query: 61  SQ---------------------------------------------------------- 120
                                                                       
Sbjct: 394 DDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNKGKKDYSKNRPHKSSVTCY 453

Query: 121 -----------------------GPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                                    K          XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 454 KCNRKGHYSSKCPLKDKINSLTIDEKTRRSLLYAIRXXXXXXXXXXXXXXXXXXXXXXXX 513

Query: 181 XXXXXXXXXXXXXXXXXGAIPCTGRCAGKCSGHINVITKDQETLFDLIELIPDEEAKRTC 187
           XXXXXXXXXXXXXXXXXG IPCTG CAGKC GHINVI KDQE LFDLI+ +PDE++KR C
Sbjct: 514 XXXXXXXXXXXXXXXXXGIIPCTGHCAGKCHGHINVINKDQEALFDLIDQLPDEDSKRMC 573

[Close]
BLAST of MELO3C032381.2 vs. NCBI nr
Match: KGN65521.1 (hypothetical protein Csa_1G434190 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-23
Identity = 58/80 (72.50%), Postives = 69/80 (86.25%), Query Frame = 0 

Query: 117 GAIPCTGRCAGKCSGHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTI 176
           GAIPCT +CA    GHINVITKDQETLFDLI+ IPDE AK+TCLLKL+QS+EEQ PQ+T+
Sbjct: 606 GAIPCTRQCA----GHINVITKDQETLFDLIDQIPDETAKKTCLLKLRQSIEEQTPQQTV 665

Query: 177 QNPIMYSYQDILNRVKGEAK 197
            + IMYSYQ+ILNR+KG+ K
Sbjct: 666 HSSIMYSYQNILNRIKGQNK 681

[Close]
BLAST of MELO3C032381.2 vs. NCBI nr
Match: KYP59351.1 (hypothetical protein KK1_014784, partial [Cajanus cajan])

HSP 1 Score: 65.5 bits (158), Expect = 2.8e-07
Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 0 

Query: 133 INVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDILNRVK 192
           INV+TK+Q+ LF+ I +I D + KR  L KLKQ+LEE+     I N   +    IL +++
Sbjct: 248 INVLTKEQDLLFEAINVITDPKEKRVYLNKLKQTLEEKPKNLVITN--KFDLNPILKKLE 307

Query: 193 GEAKIPIQVEDLHHEVKILKREVAENKQQLIYLEN 228
             +  PI ++DL  E+  LKRE+ + K+Q I  +N
Sbjct: 308 KTSTKPITIQDLQAEINNLKREIRDIKEQQILHQN 340

[Close]
BLAST of MELO3C032381.2 vs. NCBI nr
Match: KRH12921.1 (hypothetical protein GLYMA_15G205000 [Glycine max])

HSP 1 Score: 65.1 bits (157), Expect = 3.6e-07
Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 0 

Query: 131 GHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDILNR 190
           G IN +T++Q+ LF+ I  IPD + K+  L KLK++LE +  QK       +   +IL R
Sbjct: 191 GQINTLTREQDLLFEAINSIPDPQEKKVFLEKLKKTLEVKPRQKDFITNNKFDVSNILKR 250

Query: 191 VKGEAKIPIQVEDLHHEVKILKREVAENKQQ 222
           ++  +  P  ++DL  E+  LKREV E +QQ
Sbjct: 251 LENSSTKPTTIQDLQTEINNLKREVKELRQQ 281

[Close]
BLAST of MELO3C032381.2 vs. TrEMBL
Match: tr|A0A0A0LWY2|A0A0A0LWY2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385030 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.6e-43
Identity = 91/116 (78.45%), Postives = 103/116 (88.79%), Query Frame = 0 

Query: 117 GAIPCTGRCAGKCSGHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTI 176
           GAIPCT +CA    GHINVITKDQETLFDLIE IPDE AKRTCLLKL+QS+EEQ P++T+
Sbjct: 252 GAIPCTRQCA----GHINVITKDQETLFDLIEQIPDETAKRTCLLKLRQSIEEQTPRQTV 311

Query: 177 QNPIMYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQQLIYLENAFQAF 233
            +PIMYSYQ+ILNR+KGE K+PIQV DLHHEVKILK+EVA NKQ+L YLENAFQAF
Sbjct: 312 HSPIMYSYQNILNRIKGETKMPIQVNDLHHEVKILKKEVANNKQRLTYLENAFQAF 363

[Close]
BLAST of MELO3C032381.2 vs. TrEMBL
Match: tr|A0A0A0M024|A0A0A0M024_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434190 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.2e-24
Identity = 58/80 (72.50%), Postives = 69/80 (86.25%), Query Frame = 0 

Query: 117 GAIPCTGRCAGKCSGHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTI 176
           GAIPCT +CA    GHINVITKDQETLFDLI+ IPDE AK+TCLLKL+QS+EEQ PQ+T+
Sbjct: 606 GAIPCTRQCA----GHINVITKDQETLFDLIDQIPDETAKKTCLLKLRQSIEEQTPQQTV 665

Query: 177 QNPIMYSYQDILNRVKGEAK 197
            + IMYSYQ+ILNR+KG+ K
Sbjct: 666 HSSIMYSYQNILNRIKGQNK 681

[Close]
BLAST of MELO3C032381.2 vs. TrEMBL
Match: tr|A0A151SX42|A0A151SX42_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_014784 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-07
Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 0 

Query: 133 INVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDILNRVK 192
           INV+TK+Q+ LF+ I +I D + KR  L KLKQ+LEE+     I N   +    IL +++
Sbjct: 248 INVLTKEQDLLFEAINVITDPKEKRVYLNKLKQTLEEKPKNLVITN--KFDLNPILKKLE 307

Query: 193 GEAKIPIQVEDLHHEVKILKREVAENKQQLIYLEN 228
             +  PI ++DL  E+  LKRE+ + K+Q I  +N
Sbjct: 308 KTSTKPITIQDLQAEINNLKREIRDIKEQQILHQN 340

[Close]
BLAST of MELO3C032381.2 vs. TrEMBL
Match: tr|A0A0R0GC44|A0A0R0GC44_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G205000 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.4e-07
Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 0 

Query: 131 GHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDILNR 190
           G IN +T++Q+ LF+ I  IPD + K+  L KLK++LE +  QK       +   +IL R
Sbjct: 191 GQINTLTREQDLLFEAINSIPDPQEKKVFLEKLKKTLEVKPRQKDFITNNKFDVSNILKR 250

Query: 191 VKGEAKIPIQVEDLHHEVKILKREVAENKQQ 222
           ++  +  P  ++DL  E+  LKREV E +QQ
Sbjct: 251 LENSSTKPTTIQDLQTEINNLKREVKELRQQ 281

[Close]
BLAST of MELO3C032381.2 vs. TrEMBL
Match: tr|A0A0R0HHY3|A0A0R0HHY3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_11G160800 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.4e-07
Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 0 

Query: 131 GHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDILNR 190
           G IN +T++Q+ LF+ I  IPD + K+  L KLK++LE +  QK       +   +IL R
Sbjct: 490 GQINTLTREQDLLFEAINSIPDPQEKKVFLEKLKKTLEVKPRQKDFITNNKFDVSNILKR 549

Query: 191 VKGEAKIPIQVEDLHHEVKILKREVAENKQQ 222
           ++  +  P  ++DL  E+  LKREV E +QQ
Sbjct: 550 LENSSTKPTTIQDLQTEINNLKREVKELRQQ 580

The following BLAST results are available for this feature:
BLAST of MELO3C032381.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65367.17.0e-4378.45hypothetical protein Csa_1G385030 [Cucumis sativus][more]
XP_022151716.13.0e-2546.44uncharacterized protein LOC111019629 [Momordica charantia][more]
KGN65521.11.2e-2372.50hypothetical protein Csa_1G434190 [Cucumis sativus][more]
KYP59351.12.8e-0740.00hypothetical protein KK1_014784, partial [Cajanus cajan][more]
KRH12921.13.6e-0738.46hypothetical protein GLYMA_15G205000 [Glycine max][more]
BLAST of MELO3C032381.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C032381.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C032381.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LWY2|A0A0A0LWY2_CUCSA4.6e-4378.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385030 PE=4 SV=1[more]
tr|A0A0A0M024|A0A0A0M024_CUCSA8.2e-2472.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434190 PE=4 SV=1[more]
tr|A0A151SX42|A0A151SX42_CAJCA1.8e-0740.00Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_014784 PE=4 S... [more]
tr|A0A0R0GC44|A0A0R0GC44_SOYBN2.4e-0738.46Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G205000 PE=4 SV=1[more]
tr|A0A0R0HHY3|A0A0R0HHY3_SOYBN2.4e-0738.46Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_11G160800 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032381.2.1MELO3C032381.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..81
NoneNo IPR availablePANTHERPTHR33054:SF8SUBFAMILY NOT NAMEDcoord: 4..80
NoneNo IPR availablePANTHERPTHR33054FAMILY NOT NAMEDcoord: 89..221
NoneNo IPR availablePANTHERPTHR33054FAMILY NOT NAMEDcoord: 4..80
NoneNo IPR availablePANTHERPTHR33054:SF8SUBFAMILY NOT NAMEDcoord: 89..221

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C032381.2Silver-seed gourdcarmedB1024
MELO3C032381.2Wax gourdmedwgoB602
MELO3C032381.2Cucumber (Gy14) v1cgymedB041
MELO3C032381.2Cucurbita maxima (Rimu)cmamedB035
MELO3C032381.2Cucurbita maxima (Rimu)cmamedB516
MELO3C032381.2Cucurbita moschata (Rifu)cmomedB025
MELO3C032381.2Cucurbita moschata (Rifu)cmomedB503
MELO3C032381.2Cucurbita pepo (Zucchini)cpemedB635
MELO3C032381.2Cucurbita pepo (Zucchini)cpemedB863