MELO3C032362.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C032362.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionATP synthase subunit alpha
Locationchr07 : 5344665 .. 5344885 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGAACTTCAAAACGTCTTTGAAAGTGGATGAGATGGGTCGAGTCCTATCTGTAGGAGATGGAATTGCCCGAGTTTATGGATTGAAGGAGATTCAAGCTGGGGAAATGGTGGAATTTTCCAGCGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGCATTGTTGTCTTTGGTAGTGATACCGCTATTAAGGAAGGAGATCTTGTCAAGCG

mRNA sequence

ACGAACTTCAAAACGTCTTTGAAAGTGGATGAGATGGGTCGAGTCCTATCTGTAGGAGATGGAATTGCCCGAGTTTATGGATTGAAGGAGATTCAAGCTGGGGAAATGGTGGAATTTTCCAGCGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGCATTGTTGTCTTTGGTAGTGATACCGCTATTAAGGAAGGAGATCTTGTCAAGCg

Coding sequence (CDS)

ATGGGTCGAGTCCTATCTGTAGGAGATGGAATTGCCCGAGTTTATGGATTGAAGGAGATTCAAGCTGGGGAAATGGTGGAATTTTCCAGCGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGCATTGTTGTCTTTGGTAGTGATACCGCTATTAAGGAAGGAGATCTTGTCAAG

Protein sequence

MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDLVK
BLAST of MELO3C032362.2 vs. NCBI nr
Match: AFY08517.1 (ATPase subunit 1, partial (mitochondrion) [Eleusine coracana])

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. NCBI nr
Match: AEN56122.1 (putative ATP synthase F1 subunit 1 (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. NCBI nr
Match: AEN56129.1 (ATPase subunit 1 (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. NCBI nr
Match: YP_008080923.1 (ATPase subunit 1 (mitochondrion) [Butomus umbellatus] >AFY16540.1 ATPase subunit 1 (mitochondrion) [Butomus umbellatus])

HSP 1 Score: 119.0 bits (297), Expect = 5.7e-24
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 11 IGRVISVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 70

Query: 61 VK 63
          VK
Sbjct: 71 VK 72

BLAST of MELO3C032362.2 vs. NCBI nr
Match: YP_009400336.1 (ATP synthase F1 subunit 1 (mitochondrion) [Stratiotes aloides] >ANY30779.1 ATPase subunit 1 (mitochondrion) [Stratiotes aloides] >ARX11209.1 ATP synthase F1 subunit 1 (mitochondrion) [Stratiotes aloides])

HSP 1 Score: 118.6 bits (296), Expect = 7.4e-24
Identity = 59/62 (95.16%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIV+FGSDTAIKEGDL
Sbjct: 11 IGRVISVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVIFGSDTAIKEGDL 70

Query: 61 VK 63
          VK
Sbjct: 71 VK 72

BLAST of MELO3C032362.2 vs. TAIR10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein)

HSP 1 Score: 107.1 bits (266), Expect = 4.0e-24
Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 0

Query: 1   MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
           +GRV+SVGDGIA+VYGL EIQAGEMV F++GVKG+ALNLENENVGIVVFG DTAIKEGDL
Sbjct: 300 IGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMALNLENENVGIVVFGGDTAIKEGDL 359

Query: 61  VK 63
           VK
Sbjct: 360 VK 361

BLAST of MELO3C032362.2 vs. TAIR10
Match: ATMG01190.1 (ATP synthase subunit 1)

HSP 1 Score: 107.1 bits (266), Expect = 4.0e-24
Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIA+VYGL EIQAGEMV F++GVKG+ALNLENENVGIVVFG DTAIKEGDL
Sbjct: 30 IGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMALNLENENVGIVVFGGDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. TAIR10
Match: ATCG00120.1 (ATP synthase subunit alpha)

HSP 1 Score: 79.3 bits (194), Expect = 9.0e-16
Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 0

Query: 2  GRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 61
          G VL VGDGIAR+YGL E+ AGE+VEF  G  GIALNLE+ NVG+V+ G    I+EG  V
Sbjct: 30 GTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSV 89

Query: 62 K 63
          K
Sbjct: 90 K 90

BLAST of MELO3C032362.2 vs. Swiss-Prot
Match: sp|P05492|ATPAM_OENBI (ATP synthase subunit alpha, mitochondrial OS=Oenothera biennis OX=3942 GN=ATPA PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-25
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIARVYGL EIQAGEMVEF+SGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 IGRVISVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. Swiss-Prot
Match: sp|Q06735|ATPAM_BETVU (ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.0e-25
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIARVYGL EIQAGEMVEF+SGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 IGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. Swiss-Prot
Match: sp|P18260|ATPAM_HELAN (ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus OX=4232 GN=ATPA PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.0e-25
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIARVYGL EIQAGEMVEF+SGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 IGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. Swiss-Prot
Match: sp|P05494|ATPAM_MAIZE (ATP synthase subunit alpha, mitochondrial OS=Zea mays OX=4577 GN=ATPA PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.0e-25
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIARVYGL EIQAGEMVEF+SGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 IGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. Swiss-Prot
Match: sp|P05495|ATPAM_NICPL (ATP synthase subunit alpha, mitochondrial OS=Nicotiana plumbaginifolia OX=4092 GN=ATPA PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.0e-25
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIARVYGL EIQAGEMVEF+SGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 IGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. TrEMBL
Match: tr|K9N0G2|K9N0G2_ELECO (ATPase subunit 1 (Fragment) OS=Eleusine coracana OX=4511 GN=ATP1 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. TrEMBL
Match: tr|G3EU05|G3EU05_CUCME (ATP synthase subunit alpha OS=Cucumis melo subsp. melo OX=412675 GN=atp1 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. TrEMBL
Match: tr|G3EU37|G3EU37_CUCME (Putative ATP synthase F1 subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=atp1 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 30 MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 89

Query: 61 VK 63
          VK
Sbjct: 90 VK 91

BLAST of MELO3C032362.2 vs. TrEMBL
Match: tr|R4IQH4|R4IQH4_BUTUM (ATP synthase subunit alpha OS=Butomus umbellatus OX=50236 GN=atp1 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL
Sbjct: 11 IGRVISVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 70

Query: 61 VK 63
          VK
Sbjct: 71 VK 72

BLAST of MELO3C032362.2 vs. TrEMBL
Match: tr|A0A1B2ARU1|A0A1B2ARU1_9LILI (ATP synthase subunit alpha OS=Stratiotes aloides OX=55494 GN=atp1 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.9e-24
Identity = 59/62 (95.16%), Postives = 62/62 (100.00%), Query Frame = 0

Query: 1  MGRVLSVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDL 60
          +GRV+SVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIV+FGSDTAIKEGDL
Sbjct: 11 IGRVISVGDGIARVYGLKEIQAGEMVEFSSGVKGIALNLENENVGIVIFGSDTAIKEGDL 70

Query: 61 VK 63
          VK
Sbjct: 71 VK 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AFY08517.11.1e-24100.00ATPase subunit 1, partial (mitochondrion) [Eleusine coracana][more]
AEN56122.11.1e-24100.00putative ATP synthase F1 subunit 1 (mitochondrion) [Cucumis melo subsp. melo][more]
AEN56129.11.1e-24100.00ATPase subunit 1 (mitochondrion) [Cucumis melo subsp. melo][more]
YP_008080923.15.7e-2496.77ATPase subunit 1 (mitochondrion) [Butomus umbellatus] >AFY16540.1 ATPase subunit... [more]
YP_009400336.17.4e-2495.16ATP synthase F1 subunit 1 (mitochondrion) [Stratiotes aloides] >ANY30779.1 ATPas... [more]
Match NameE-valueIdentityDescription
AT2G07698.14.0e-2485.48ATPase, F1 complex, alpha subunit protein[more]
ATMG01190.14.0e-2485.48ATP synthase subunit 1[more]
ATCG00120.19.0e-1662.30ATP synthase subunit alpha[more]
Match NameE-valueIdentityDescription
sp|P05492|ATPAM_OENBI1.6e-2593.55ATP synthase subunit alpha, mitochondrial OS=Oenothera biennis OX=3942 GN=ATPA P... [more]
sp|Q06735|ATPAM_BETVU2.0e-2593.55ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=... [more]
sp|P18260|ATPAM_HELAN2.0e-2593.55ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus OX=4232 GN=ATPA P... [more]
sp|P05494|ATPAM_MAIZE2.0e-2593.55ATP synthase subunit alpha, mitochondrial OS=Zea mays OX=4577 GN=ATPA PE=3 SV=1[more]
sp|P05495|ATPAM_NICPL2.0e-2593.55ATP synthase subunit alpha, mitochondrial OS=Nicotiana plumbaginifolia OX=4092 G... [more]
Match NameE-valueIdentityDescription
tr|K9N0G2|K9N0G2_ELECO7.5e-25100.00ATPase subunit 1 (Fragment) OS=Eleusine coracana OX=4511 GN=ATP1 PE=4 SV=1[more]
tr|G3EU05|G3EU05_CUCME7.5e-25100.00ATP synthase subunit alpha OS=Cucumis melo subsp. melo OX=412675 GN=atp1 PE=3 SV... [more]
tr|G3EU37|G3EU37_CUCME7.5e-25100.00Putative ATP synthase F1 subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=atp1... [more]
tr|R4IQH4|R4IQH4_BUTUM3.7e-2496.77ATP synthase subunit alpha OS=Butomus umbellatus OX=50236 GN=atp1 PE=3 SV=1[more]
tr|A0A1B2ARU1|A0A1B2ARU1_9LILI4.9e-2495.16ATP synthase subunit alpha OS=Stratiotes aloides OX=55494 GN=atp1 PE=3 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:1902600hydrogen ion transmembrane transport
GO:0046034ATP metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036121ATPase_F1/V1/A1_a/bsu_N_sf
IPR023366ATP_synth_asu-like_sf
IPR004100ATPase_F1/V1/A1_a/bsu_N
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006754 ATP biosynthetic process
biological_process GO:0046034 ATP metabolic process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006811 ion transport
biological_process GO:0015992 proton transport
biological_process GO:0006810 transport
biological_process GO:1902600 hydrogen ion transmembrane transport
cellular_component GO:0005739 mitochondrion
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0032559 adenyl ribonucleotide binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032362.2.1MELO3C032362.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainPFAMPF02874ATP-synt_ab_Ncoord: 1..62
e-value: 3.6E-18
score: 65.7
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyGENE3DG3DSA:2.40.30.20coord: 1..62
e-value: 8.1E-32
score: 110.6
NoneNo IPR availablePANTHERPTHR43089FAMILY NOT NAMEDcoord: 2..62
NoneNo IPR availablePANTHERPTHR43089:SF5ATP SYNTHASE SUBUNIT ALPHAcoord: 2..62
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilySUPERFAMILYSSF50615N-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 1..62

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None