MELO3C032265.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032265.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionsoluble inorganic pyrophosphatase 6, chloroplastic
Locationchr06 : 35104791 .. 35106587 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTTCCTTTTTGCCAGACTTTTCATGTTAGACTTCCACGTGATTTCCATTTTGCAGACTCTTCCTATTCGTTAGATTCTCCAAGTGATTTCCTTTTAGCCAGACTCTTTCTCTTCACCGTCAGATCTATAGTTTTCGTCTTCTTCGCACGATGTGGGTTTTTGTTGTGAGTTTTCGCCAGCTCTCATAGTCTTTTTCTTTGCCGGATCTATAGTTTTCGTCTTTTCTTTGAGTTGATTTGAGTTTTCGGTGTAGATTTTTGCCAGATCTGTGTTTCATTTCCCTCTCCAAAAGACTACCCTTCTCCTGCAGAGCTTTGTATCTCCCTGAGGTCAAGATCAAGGAGGAAGGCCAGCCTGAAACCCTCCATTATCACGTCTTCATCACTGACCAGTCCGGCAAAATGGTGTTTCCCTTTTCTTAAATGAATTTGAAAAGAATTAATTGGGACTTTAAGATGAATAGGTTTGATTGGAATTAATGAATTGGGGAGCCCTTTAATGGATATTTAGAATATCATGAACTGTTGTTGACTGCGAGGGTGCAAAATCATAGAGTACCGAGACTTTGTTGTTCTGTGTGTACTGTAGCAGAATCCCATATATGTAAATGTGCACCTTTTATTCTGATTGTCTAACAATTTCTTTGAAGAGCTGCGAATAGAAGAATCGCGATTTTGGATTGATTTTTGTTTGATATTAATTATGCTAGTGTTCTGTGTTCTTAAACTTTGGGTTAGCATTATTAAACCAAAGAGTATTGTTGAATTAAAATGGCGAATGAAATGTCTGTGATAGATCAGATGATGTATATATAAGGAAGTTTGTTAGATTCCAAAGAGCTCAAAGAAAAACATGGTTTTGTTATAATATTACTTGGCTCATACTTTATTCTAATTCAGTATATTACTTGCTTGGTTATTCACTGTGAATTTGTAACATAAAATAGGGAACAATAGTATTCTTAAGGTTCAACTTACTTATTTTTGCAATTTGAGTAATAGTTTCTTGCCATGAGAAAGAAAATCAATTCGTTGAACTAATTATTTCTCAAAAGTTATTTGAGAGCGAGTTGAAGAAATTAAGACAACCATATGCATCAACAGTAAGTTCAATTGATGATAGAGTATAAATTTGAGTGGTGTAATTAAGATCGATAACAAGAGACAAACATTTTTTAATCTATATATATATAGAGTGATTATAAGTAAATGTTGTATGATCAAGCATGTTGCTTATATATATAAGACTATCATAAGAATGATACTTTATAATTTCATAATTGTCCATTCATACATCTATCTTGTTTTCTACGTATTGATTTTTGTTTAACATTCTTGTAGATAAGCTAATTCCTTTGCATCTCATTTAGCTTGTTTTAGAGTATATTATGGTACTATACTACATCAAATGTTTGAATGACATAAGAATAGCTATAAATTAAGTCACCAAAATATTCAGAATCATGCTAATCCACTAACCAAAGGACACAACATAATGAGGATATCAATCACTCACAAGATCAATTGAAATATCAATTCGAAGTACCGTCCATTTTTTCTCTAAATTACCATAGGTAGTAAAGTTAAAGGTTAAATTTTGTTTTGTTTCTTTCAATTCTAAATATTGAGAGCATAATAACTTACTTTTAAAATTAATATTACATTCTAGATGTCACAAATTATCGATGAGATTGTCGAAAATGATGGATTAAGAAGTGAGGGACCATGGTCGGACAAGAGTGAAACTTTATGTGTTGACTTAATGGATGAAGAGGTTGCAAAAGGCAATTGA

mRNA sequence

ATGTCATTTCCTTTTTGCCAGACTTTTCATGTTAGACTTCCACGTGATTTCCATTTTGCAGACTCTTCCTATTCGTTAGATTCTCCAAGTGATTTCCTTTTAGCCAGACTCTTTCTCTTCACCGTCAGATCTATAGTTTTCGTCTTCTTCGCACGATGTGGATTTTTGCCAGATCTGTGTTTCATTTCCCTCTCCAAAAGACTACCCTTCTCCTGCAGAGCTTTGTATCTCCCTGAGGTCAAGATCAAGGAGGAAGGCCAGCCTGAAACCCTCCATTATCACGTCTTCATCACTGACCAGTCCGGCAAAATGATGTCACAAATTATCGATGAGATTGTCGAAAATGATGGATTAAGAAGTGAGGGACCATGGTCGGACAAGAGTGAAACTTTATGTGTTGACTTAATGGATGAAGAGGTTGCAAAAGGCAATTGA

Coding sequence (CDS)

ATGTCATTTCCTTTTTGCCAGACTTTTCATGTTAGACTTCCACGTGATTTCCATTTTGCAGACTCTTCCTATTCGTTAGATTCTCCAAGTGATTTCCTTTTAGCCAGACTCTTTCTCTTCACCGTCAGATCTATAGTTTTCGTCTTCTTCGCACGATGTGGATTTTTGCCAGATCTGTGTTTCATTTCCCTCTCCAAAAGACTACCCTTCTCCTGCAGAGCTTTGTATCTCCCTGAGGTCAAGATCAAGGAGGAAGGCCAGCCTGAAACCCTCCATTATCACGTCTTCATCACTGACCAGTCCGGCAAAATGATGTCACAAATTATCGATGAGATTGTCGAAAATGATGGATTAAGAAGTGAGGGACCATGGTCGGACAAGAGTGAAACTTTATGTGTTGACTTAATGGATGAAGAGGTTGCAAAAGGCAATTGA

Protein sequence

MSFPFCQTFHVRLPRDFHFADSSYSLDSPSDFLLARLFLFTVRSIVFVFFARCGFLPDLCFISLSKRLPFSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMMSQIIDEIVENDGLRSEGPWSDKSETLCVDLMDEEVAKGN
Homology
[Close]
BLAST of MELO3C032265.2 vs. NCBI nr
Match: XP_008455105.1 (PREDICTED: soluble inorganic pyrophosphatase 6, chloroplastic [Cucumis melo] >ADN34257.1 inorganic pyrophosphatase [Cucumis melo subsp. melo])

HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12
Identity = 45/69 (65.22%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 49  FFARCGFLPDLC------FISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFI 107
           FF++  FLP+        FISLS+RLP     FSCRALYLPEVKIKEEGQPETL Y VF 
Sbjct: 19  FFSKTSFLPNHTLPFNSNFISLSRRLPSSRKSFSCRALYLPEVKIKEEGQPETLDYRVFF 78

[Close]
BLAST of MELO3C032265.2 vs. NCBI nr
Match: XP_004136906.1 (PREDICTED: soluble inorganic pyrophosphatase 6, chloroplastic [Cucumis sativus] >KGN43793.1 hypothetical protein Csa_7G067480 [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 5.2e-12
Identity = 46/77 (59.74%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 41  TVRSIVFVFFARCGFLPDLC------FISLSKRLP-----FSCRALYLPEVKIKEEGQPE 100
           T  S    FF++  FLP+        FISLS+ LP     FSCRALYLPEVKIKEEGQPE
Sbjct: 11  TTTSAASSFFSKTSFLPNHTLPFTSNFISLSRTLPSSRKSFSCRALYLPEVKIKEEGQPE 70

Query: 101 TLHYHVFITDQSGKMMS 107
           TL Y VF TDQSGK +S
Sbjct: 71  TLDYRVFFTDQSGKKVS 87

[Close]
BLAST of MELO3C032265.2 vs. NCBI nr
Match: XP_022927837.1 (soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-10
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 0 

Query: 58  DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMMS 107
           D  F+S S+RLP     FSCRALY+PEVKIKEEGQPETL Y VF TDQSGK +S
Sbjct: 36  DSNFLSFSRRLPSSRKSFSCRALYIPEVKIKEEGQPETLDYRVFFTDQSGKKVS 89

[Close]
BLAST of MELO3C032265.2 vs. NCBI nr
Match: XP_023530049.1 (soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-10
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 0 

Query: 58  DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMMS 107
           D  F+S S+RLP     FSCRALY+PEVKIKEEGQPETL Y VF TDQSGK +S
Sbjct: 38  DSNFLSFSRRLPSSRKSFSCRALYIPEVKIKEEGQPETLDYRVFFTDQSGKKVS 91

[Close]
BLAST of MELO3C032265.2 vs. NCBI nr
Match: XP_022988861.1 (soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 37/54 (68.52%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 58  DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMMS 107
           D  F+S S+RLP     FSCRALY+PEVKIKEEG PETL Y VF TDQSGK +S
Sbjct: 40  DSNFLSFSRRLPSSRKSFSCRALYIPEVKIKEEGLPETLDYRVFFTDQSGKKVS 93

[Close]
BLAST of MELO3C032265.2 vs. TAIR10
Match: AT5G09650.1 (pyrophosphorylase 6)

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 53  CGFLPDLCF----ISLSKRLPFSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMMS 107
           CG    LCF    + L  + PFSC A+Y P+VK++EEG  E+L Y VF  D SGK +S
Sbjct: 34  CGGFGGLCFSRRALVLKSKRPFSCSAIYNPQVKVQEEGPAESLDYRVFFLDGSGKKVS 91

[Close]
BLAST of MELO3C032265.2 vs. Swiss-Prot
Match: sp|Q9LXC9|IPYR6_ARATH (Soluble inorganic pyrophosphatase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPA6 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-07
Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 53  CGFLPDLCF----ISLSKRLPFSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMMS 107
           CG    LCF    + L  + PFSC A+Y P+VK++EEG  E+L Y VF  D SGK +S
Sbjct: 34  CGGFGGLCFSRRALVLKSKRPFSCSAIYNPQVKVQEEGPAESLDYRVFFLDGSGKKVS 91

[Close]
BLAST of MELO3C032265.2 vs. TrEMBL
Match: tr|A0A1S3C048|A0A1S3C048_CUCME (soluble inorganic pyrophosphatase 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495360 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-12
Identity = 45/69 (65.22%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 49  FFARCGFLPDLC------FISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFI 107
           FF++  FLP+        FISLS+RLP     FSCRALYLPEVKIKEEGQPETL Y VF 
Sbjct: 19  FFSKTSFLPNHTLPFNSNFISLSRRLPSSRKSFSCRALYLPEVKIKEEGQPETLDYRVFF 78

[Close]
BLAST of MELO3C032265.2 vs. TrEMBL
Match: tr|E5GCQ8|E5GCQ8_CUCME (Inorganic pyrophosphatase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-12
Identity = 45/69 (65.22%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 49  FFARCGFLPDLC------FISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFI 107
           FF++  FLP+        FISLS+RLP     FSCRALYLPEVKIKEEGQPETL Y VF 
Sbjct: 19  FFSKTSFLPNHTLPFNSNFISLSRRLPSSRKSFSCRALYLPEVKIKEEGQPETLDYRVFF 78

[Close]
BLAST of MELO3C032265.2 vs. TrEMBL
Match: tr|A0A0A0K2R2|A0A0A0K2R2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067480 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.4e-12
Identity = 46/77 (59.74%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 41  TVRSIVFVFFARCGFLPDLC------FISLSKRLP-----FSCRALYLPEVKIKEEGQPE 100
           T  S    FF++  FLP+        FISLS+ LP     FSCRALYLPEVKIKEEGQPE
Sbjct: 11  TTTSAASSFFSKTSFLPNHTLPFTSNFISLSRTLPSSRKSFSCRALYLPEVKIKEEGQPE 70

Query: 101 TLHYHVFITDQSGKMMS 107
           TL Y VF TDQSGK +S
Sbjct: 71  TLDYRVFFTDQSGKKVS 87

[Close]
BLAST of MELO3C032265.2 vs. TrEMBL
Match: tr|V4LB47|V4LB47_EUTSA (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10014221mg PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 8.7e-08
Identity = 37/81 (45.68%), Postives = 45/81 (55.56%), Query Frame = 0 

Query: 30  SDFLLARLFLFTVRSIVFVFFARCGFLPDLCF----ISLSKRLPFSCRALYLPEVKIKEE 89
           S FL  R FL   +         CG    LCF    + L  + PFSC A+Y P+VK+KEE
Sbjct: 18  SCFLAKRTFLLPAKK-------SCGGFGGLCFNKRALVLKSKRPFSCSAIYNPQVKVKEE 77

Query: 90  GQPETLHYHVFITDQSGKMMS 107
           GQPE+L Y VF  D SGK +S
Sbjct: 78  GQPESLDYRVFFLDGSGKKVS 91

[Close]
BLAST of MELO3C032265.2 vs. TrEMBL
Match: tr|A0A200Q8K5|A0A200Q8K5_9MAGN (Inorganic pyrophosphatase OS=Macleaya cordata OX=56857 GN=BVC80_8723g18 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.3e-07
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 58  DLCFISLSKRLPFSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMMS 107
           DL F   SKR PF+C++LY PEV+IK+EGQPETL Y VF  D SGK +S
Sbjct: 42  DLSFNRKSKR-PFTCKSLYKPEVQIKQEGQPETLDYRVFFVDNSGKKVS 89

The following BLAST results are available for this feature:
BLAST of MELO3C032265.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455105.11.8e-1265.22PREDICTED: soluble inorganic pyrophosphatase 6, chloroplastic [Cucumis melo] >AD... [more]
XP_004136906.15.2e-1259.74PREDICTED: soluble inorganic pyrophosphatase 6, chloroplastic [Cucumis sativus] ... [more]
XP_022927837.11.7e-1070.37soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita moschata][more]
XP_023530049.11.7e-1070.37soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita pepo subsp. p... [more]
XP_022988861.11.1e-0968.52soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita maxima][more]
BLAST of MELO3C032265.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09650.11.1e-0848.28pyrophosphorylase 6[more]
BLAST of MELO3C032265.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LXC9|IPYR6_ARATH2.0e-0748.28Soluble inorganic pyrophosphatase 6, chloroplastic OS=Arabidopsis thaliana OX=37... [more]
BLAST of MELO3C032265.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C048|A0A1S3C048_CUCME1.2e-1265.22soluble inorganic pyrophosphatase 6, chloroplastic OS=Cucumis melo OX=3656 GN=LO... [more]
tr|E5GCQ8|E5GCQ8_CUCME1.2e-1265.22Inorganic pyrophosphatase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A0A0K2R2|A0A0A0K2R2_CUCSA3.4e-1259.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067480 PE=4 SV=1[more]
tr|V4LB47|V4LB47_EUTSA8.7e-0845.68Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10014221mg PE=... [more]
tr|A0A200Q8K5|A0A200Q8K5_9MAGN4.3e-0763.27Inorganic pyrophosphatase OS=Macleaya cordata OX=56857 GN=BVC80_8723g18 PE=4 SV=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006796 phosphate-containing compound metabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004427 inorganic diphosphatase activity
molecular_function GO:0000287 magnesium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032265.2.1MELO3C032265.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C032265.2Watermelon (97103) v2medwmbB410
MELO3C032265.2Watermelon (97103) v2medwmbB415
MELO3C032265.2Wax gourdmedwgoB501
MELO3C032265.2Wax gourdmedwgoB521
MELO3C032265.2Cucumber (Gy14) v2cgybmedB202
MELO3C032265.2Cucumber (Gy14) v1cgymedB533
MELO3C032265.2Cucurbita maxima (Rimu)cmamedB335
MELO3C032265.2Cucurbita maxima (Rimu)cmamedB869
MELO3C032265.2Cucurbita moschata (Rifu)cmomedB321
MELO3C032265.2Cucurbita moschata (Rifu)cmomedB861
MELO3C032265.2Cucurbita pepo (Zucchini)cpemedB223
MELO3C032265.2Cucurbita pepo (Zucchini)cpemedB948
MELO3C032265.2Wild cucumber (PI 183967)cpimedB225
MELO3C032265.2Cucumber (Chinese Long) v2cumedB224
MELO3C032265.2Melon (DHL92) v3.6.1medmedB012
MELO3C032265.2Bottle gourd (USVL1VR-Ls)lsimedB462
MELO3C032265.2Watermelon (Charleston Gray)medwcgB401
MELO3C032265.2Watermelon (97103) v1medwmB433
MELO3C032265.2Silver-seed gourdcarmedB0540
MELO3C032265.2Cucumber (Chinese Long) v3cucmedB231
MELO3C032265.2Cucumber (Chinese Long) v3cucmedB408