MELO3C032214.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032214.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCAI-1 autoinducer sensor kinase/phosphatase cqsS isoform 2
Locationchr06 : 28459397 .. 28460198 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAACGTTGGAAGTGTTTTGAGGTGGGCATGGTACAAGTTTAATGTATTTGAGCTTAATGTACGTGGCACTTATATCGGCATGTTTATTACAACCTGCAGAATTGTCTTGGCGCGTTAGACGGGACGTACATAAAGGTGAACGTCCCTGCAATAGAGCGGCTTACATTTAGAACGTATAAGGAAGAAATTGCCACAATAGTACTGAGCGTGTGCGACACGAAAGGGGATTTCGTTTATGTCCTCATCGATTGGGAAGGATTCGCGGTAGACTCGCGAATTCTACGTGATGTCCTTTCACGAGGAAATAGACTACAAGTGCCAAAGGGTATATCTTATTTATAATAAAACAACGCCGCTTTCTACTTACCTATTTAAAACGTCTAAACAAATGTTTTAATAATAGGACATTATTATTTGTGCGATGCGAGTTATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACTATTTGCAAGAGTGGCGTGGTGCTGAAAATGCGCTAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCAACAAGAATGTCATTAAGCGCTCCTTCGGTGTTATTAAGGGTCGTTGGGCCATTCTTCGTGGGAAGTCATACTATCCTCTGCAAGTCCAGTGTCGCACCATACTAGCATGTTGCTTACTCCACAATTTGATCAATAGAGAAATGACATATTGCGACGACGTTGACGACGTGGACAAGGGGGACTCCACGTACGCGACGTCCACCGCTTCAGAAGACATTCACTACATTGAGATGATGGCGCGATGA

mRNA sequence

ATGATCAACGTTGGAAGTGTTTTGAGGTGGGCATGGTACAAGTTTAATGTATTTGAGCTTAATAATTGTCTTGGCGCGTTAGACGGGACGTACATAAAGGTGAACGTCCCTGCAATAGAGCGGCTTACATTTAGAACGTATAAGGAAGAAATTGCCACAATAGTACTGAGCGTGTGCGACACGAAAGGGGATTTCGTTTATGTCCTCATCGATTGGGAAGGATTCGCGGTAGACTCGCGAATTCTACGTGATGTCCTTTCACGAGGAAATAGACTACAAGTGCCAAAGGGACATTATTATTTGTGCGATGCGAGTTATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACTATTTGCAAGAGTGGCGTGGTGCTGAAAATGCGCTAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCAACAAGAATGTCATTAAGCGCTCCTTCGGGTCGTTGGGCCATTCTTCGTGGGAAGTCATACTATCCTCTGCAAGTCCAGTGTCGCACCATACTAGCATGTTGCTTACTCCACAATTTGATCAATAGAGAAATGACATATTGCGACGACGTTGACGACGTGGACAAGGGGGACTCCACGTACGCGACGTCCACCGCTTCAGAAGACATTCACTACATTGAGATGATGGCGCGATGA

Coding sequence (CDS)

ATGATCAACGTTGGAAGTGTTTTGAGGTGGGCATGGTACAAGTTTAATGTATTTGAGCTTAATAATTGTCTTGGCGCGTTAGACGGGACGTACATAAAGGTGAACGTCCCTGCAATAGAGCGGCTTACATTTAGAACGTATAAGGAAGAAATTGCCACAATAGTACTGAGCGTGTGCGACACGAAAGGGGATTTCGTTTATGTCCTCATCGATTGGGAAGGATTCGCGGTAGACTCGCGAATTCTACGTGATGTCCTTTCACGAGGAAATAGACTACAAGTGCCAAAGGGACATTATTATTTGTGCGATGCGAGTTATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACTATTTGCAAGAGTGGCGTGGTGCTGAAAATGCGCTAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCAACAAGAATGTCATTAAGCGCTCCTTCGGGTCGTTGGGCCATTCTTCGTGGGAAGTCATACTATCCTCTGCAAGTCCAGTGTCGCACCATACTAGCATGTTGCTTACTCCACAATTTGATCAATAGAGAAATGACATATTGCGACGACGTTGACGACGTGGACAAGGGGGACTCCACGTACGCGACGTCCACCGCTTCAGAAGACATTCACTACATTGAGATGATGGCGCGATGA

Protein sequence

MINVGSVLRWAWYKFNVFELNNCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAVDSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRGAENALTNAKEYFNMKHSSTRMSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHNLINREMTYCDDVDDVDKGDSTYATSTASEDIHYIEMMAR
Homology
[Close]
BLAST of MELO3C032214.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 324.7 bits (831), Expect = 2.4e-85
Identity = 159/202 (78.71%), Postives = 170/202 (84.16%), Query Frame = 0 

Query: 22  NCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAVDSRI 81
           NCLGALDGTYIKVNVPA +R TFRT K EIAT VL VCD KGDFVYVL  WEG A DSRI
Sbjct: 111 NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRI 170

Query: 82  LRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRGAENALTNAKEYFN 141
           LRD +S+ N LQVPKG+YYLCDA YPNAEGFLAPY+GQRY+LQEWRGA NA TNAKEYFN
Sbjct: 171 LRDAISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFN 230

Query: 142 MKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHNLINREMTYCDDVD 201
           MKHSS R     +     GRW ILRGKSYYPLQVQCRTILAC LLHNLINREMTYC+DV+
Sbjct: 231 MKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVE 290

Query: 202 DVDKGDSTYATSTASEDIHYIE 220
           D D+GDSTYAT+TASEDI YIE
Sbjct: 291 DEDEGDSTYATTTASEDIQYIE 312

[Close]
BLAST of MELO3C032214.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 303.9 bits (777), Expect = 4.5e-79
Identity = 150/215 (69.77%), Postives = 170/215 (79.07%), Query Frame = 0 

Query: 9   RWAWYKFNVFELNNCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYV 68
           RW W++       NCLGALDGTYIKVNVPA +R  +RT K E+AT VL VCDTKGDFVYV
Sbjct: 133 RWRWFE-------NCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYV 192

Query: 69  LIDWEGFAVDSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRG 128
           L  WEG A DSRILRD LSR NRL+VPKG+YYL D  YPNAEGFLAPYRGQRY+LQEWRG
Sbjct: 193 LAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRG 252

Query: 129 AENALTNAKEYFNMKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHN 188
            ENA + +KE+FNMKH S R     +     GRWAILRGKSYYP++VQCRTILACCLLHN
Sbjct: 253 PENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHN 312

Query: 189 LINREMTYCDDVDDVDKGDSTYATSTASEDIHYIE 220
           LINREMT  D  D++D+ DST+AT TA++DIHYIE
Sbjct: 313 LINREMTNFDIEDNIDEVDSTHAT-TAADDIHYIE 339

[Close]
BLAST of MELO3C032214.2 vs. NCBI nr
Match: XP_008457266.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 144/206 (69.90%), Postives = 164/206 (79.61%), Query Frame = 0 

Query: 18  FELNNCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAV 77
           + L NCLGALDGTYIKVNVPA +R  +RT K E+AT VL VCDTKGDFVYVL+ WEG A 
Sbjct: 75  YVLQNCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLVGWEGSAA 134

Query: 78  DSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRGAENALTNAK 137
           DSRILRD LSR N L+VPKG+YYL D  YPNAEGFLAPYRGQRY+LQEWRG ENA + +K
Sbjct: 135 DSRILRDALSRPNELKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSK 194

Query: 138 EYFNMKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHNLINREMTYC 197
           E+FNMKHSS R     +     GRWAIL GKSYY ++VQCRTIL CCLLHNLINREMT  
Sbjct: 195 EFFNMKHSSARNVIERAFGVLKGRWAILWGKSYYLVEVQCRTILTCCLLHNLINREMTNF 254

Query: 198 DDVDDVDKGDSTYATSTASEDIHYIE 220
           D  D++D+ DST+AT  A++DIHYIE
Sbjct: 255 DIQDNIDEVDSTHAT-IATDDIHYIE 279

[Close]
BLAST of MELO3C032214.2 vs. NCBI nr
Match: XP_008455792.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 270.4 bits (690), Expect = 5.5e-69
Identity = 129/193 (66.84%), Postives = 148/193 (76.68%), Query Frame = 0 

Query: 9   RWAWYKFNVFELNNCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYV 68
           RW W++       NCLGALDGTYIKVNV A +R  +RT K E+AT VL  CDTKGDFV+V
Sbjct: 91  RWKWFE-------NCLGALDGTYIKVNVSATDRPRYRTRKGEVATNVLGACDTKGDFVFV 150

Query: 69  LIDWEGFAVDSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRG 128
           L  WEG A DSRILRD +SR N L+VPKG+YYLCDA YPNAEGFLAPYRG+RY+L EWRG
Sbjct: 151 LFGWEGSAADSRILRDAISRHNGLKVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRG 210

Query: 129 AENALTNAKEYFNMKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHN 188
             NA T A+E+FNMKHSS R     +     GRWAILRGKSYYP+ VQCRTI+ACCLLHN
Sbjct: 211 ESNAPTTAREFFNMKHSSARNVIERAFGLLKGRWAILRGKSYYPVDVQCRTIMACCLLHN 270

Query: 189 LINREMTYCDDVD 198
           LINREMT  + ++
Sbjct: 271 LINREMTNSEIIE 276

[Close]
BLAST of MELO3C032214.2 vs. NCBI nr
Match: XP_016903646.1 (PREDICTED: uncharacterized protein LOC107992265 [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 7.7e-55
Identity = 121/215 (56.28%), Postives = 138/215 (64.19%), Query Frame = 0 

Query: 9   RWAWYKFNVFELNNCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYV 68
           RW W++       NCLGALDGTYIKVNVPA                              
Sbjct: 91  RWRWFE-------NCLGALDGTYIKVNVPARS---------------------------- 150

Query: 69  LIDWEGFAVDSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRG 128
                  A DSRIL D LSR N L+VPKG+YYL D  YPNAEGFLAPYRGQ Y+LQEWRG
Sbjct: 151 -------AADSRILCDALSRPNGLKVPKGYYYLVDVGYPNAEGFLAPYRGQHYHLQEWRG 210

Query: 129 AENALTNAKEYFNMKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHN 188
            ENA + +KE+FNMKHSS R     +     GRWAILR KSYYP++VQC TILACCLLHN
Sbjct: 211 PENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRKKSYYPVEVQCCTILACCLLHN 262

Query: 189 LINREMTYCDDVDDVDKGDSTYATSTASEDIHYIE 220
           LINREMT  D  D++D+ DST+AT  A++DIHYIE
Sbjct: 271 LINREMTNFDIEDNIDEVDSTHAT-IAADDIHYIE 262

[Close]
BLAST of MELO3C032214.2 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 111.3 bits (277), Expect = 7.7e-25
Identity = 63/172 (36.63%), Postives = 87/172 (50.58%), Query Frame = 0 

Query: 22  NCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAVDSRI 81
           +C+G +D  +I V V   E+  FR     +   VL+       F YVL  WEG A D ++
Sbjct: 142 DCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQV 201

Query: 82  LRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRGAENALTNAKEYFN 141
           L   L+R N+LQVP+G YY+ D  YPN  GF+APY G          + N+   AKE FN
Sbjct: 202 LNAALTRRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFN 261

Query: 142 MKHSSTRMSLSAPSG----RWAILRGKSYYPLQVQCRTILACCLLHNLINRE 190
            +H     ++    G    R+ IL     YPLQ Q + ++A C LHN +  E
Sbjct: 262 ERHKLLHRAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLE 304

[Close]
BLAST of MELO3C032214.2 vs. TAIR10
Match: AT5G35695.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-16
Identity = 50/141 (35.46%), Postives = 70/141 (49.65%), Query Frame = 0 

Query: 65  FVYVLIDWEGFAVDSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQ 124
           F+YVL  WEG A DSR+L D L +          +YL D  + N   FLAP+RG RY+LQ
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 125 EWRGAENALTNAKEYFNMKHSSTRMSLSAPSG----RWAILRGKSYYPLQVQCRTILACC 184
           E+ G         E FN++H S R  +    G    R+AI +    +  + Q   +L C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 185 LLHNLINREMTYCDDVDDVDK 202
            LHN + +E    D+ D  D+
Sbjct: 145 ALHNFLRKECR-SDEADFPDE 154

[Close]
BLAST of MELO3C032214.2 vs. TAIR10
Match: AT3G55350.1 (PIF / Ping-Pong family of plant transposases)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-12
Identity = 53/188 (28.19%), Postives = 87/188 (46.28%), Query Frame = 0 

Query: 20  LNNCLGALDGTYIKVNVPAIE--RLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAV 79
           L NC GA+D T+I +N+PA+E     +   ++  +  + +V D    F+ V+  W G   
Sbjct: 180 LPNCCGAIDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLN 239

Query: 80  DSRILRD-----VLSRGNRLQVPK---------GHYYLCDASYPNAEGFLAPYRGQRYYL 139
           D  +L++     ++ +G RL   K           Y + D+ +P     L PY+G+   L
Sbjct: 240 DDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLLTPYQGKPTSL 299

Query: 140 QEWRGAENALTNAKEYFNMKHS----STRMSLSAPSGRWAILRGKSYYPLQVQC-RTILA 187
            +              FN +HS    + +M+LS    RW I+ G  + P + +  R I  
Sbjct: 300 PQTE------------FNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFV 355

[Close]
BLAST of MELO3C032214.2 vs. TAIR10
Match: AT1G43722.1 (unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 39/141 (27.66%), Postives = 65/141 (46.10%), Query Frame = 0 

Query: 24  LGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAVDSRILR 83
           +GA+DGT++ V V    +  +    +  +  ++++CD K  F Y+     G   D+ +L+
Sbjct: 177 VGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVLQ 236

Query: 84  DVLSRGNRLQVPKGH-YYLCDASYPNAEGFLAPYRGQ-----RYYLQEWRGAENALTNAK 143
                 +   +P    YYL D+ YPN +G LAPYR       RY++ ++        N  
Sbjct: 237 IAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPRP-RNKH 296

Query: 144 EYFNMKHSSTRMSLSAPSGRW 159
           E FN  H+S R  +      W
Sbjct: 297 ELFNQCHTSLRSVIERTFRIW 316

[Close]
BLAST of MELO3C032214.2 vs. TAIR10
Match: AT5G28950.1 (unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 0 

Query: 22  NCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAVDSRI 81
           +C+GA+D T+I   V   +  +FR  K +I+  +L+ C+   +F+YVL  WEG A DS++
Sbjct: 24  DCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSKV 83

Query: 82  LRDVLSR-GNRLQVP---KGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRG--AENALTN 139
           L D L+R  NRL VP   +                L     QR Y  +WR   A N   N
Sbjct: 84  LNDALTRNSNRLPVPEEDESAXXXXXXXXXXXXXXLTTQDQQREYANQWRETIASNMWNN 143

[Close]
BLAST of MELO3C032214.2 vs. Swiss-Prot
Match: sp|Q9M2U3|ALPL_ARATH (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-11
Identity = 53/188 (28.19%), Postives = 87/188 (46.28%), Query Frame = 0 

Query: 20  LNNCLGALDGTYIKVNVPAIE--RLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAV 79
           L NC GA+D T+I +N+PA+E     +   ++  +  + +V D    F+ V+  W G   
Sbjct: 180 LPNCCGAIDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLN 239

Query: 80  DSRILRD-----VLSRGNRLQVPK---------GHYYLCDASYPNAEGFLAPYRGQRYYL 139
           D  +L++     ++ +G RL   K           Y + D+ +P     L PY+G+   L
Sbjct: 240 DDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLLTPYQGKPTSL 299

Query: 140 QEWRGAENALTNAKEYFNMKHS----STRMSLSAPSGRWAILRGKSYYPLQVQC-RTILA 187
            +              FN +HS    + +M+LS    RW I+ G  + P + +  R I  
Sbjct: 300 PQTE------------FNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFV 355

[Close]
BLAST of MELO3C032214.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.6e-85
Identity = 159/202 (78.71%), Postives = 170/202 (84.16%), Query Frame = 0 

Query: 22  NCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAVDSRI 81
           NCLGALDGTYIKVNVPA +R TFRT K EIAT VL VCD KGDFVYVL  WEG A DSRI
Sbjct: 111 NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRI 170

Query: 82  LRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRGAENALTNAKEYFN 141
           LRD +S+ N LQVPKG+YYLCDA YPNAEGFLAPY+GQRY+LQEWRGA NA TNAKEYFN
Sbjct: 171 LRDAISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFN 230

Query: 142 MKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHNLINREMTYCDDVD 201
           MKHSS R     +     GRW ILRGKSYYPLQVQCRTILAC LLHNLINREMTYC+DV+
Sbjct: 231 MKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVE 290

Query: 202 DVDKGDSTYATSTASEDIHYIE 220
           D D+GDSTYAT+TASEDI YIE
Sbjct: 291 DEDEGDSTYATTTASEDIQYIE 312

[Close]
BLAST of MELO3C032214.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 3.0e-79
Identity = 150/215 (69.77%), Postives = 170/215 (79.07%), Query Frame = 0 

Query: 9   RWAWYKFNVFELNNCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYV 68
           RW W++       NCLGALDGTYIKVNVPA +R  +RT K E+AT VL VCDTKGDFVYV
Sbjct: 133 RWRWFE-------NCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYV 192

Query: 69  LIDWEGFAVDSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRG 128
           L  WEG A DSRILRD LSR NRL+VPKG+YYL D  YPNAEGFLAPYRGQRY+LQEWRG
Sbjct: 193 LAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRG 252

Query: 129 AENALTNAKEYFNMKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHN 188
            ENA + +KE+FNMKH S R     +     GRWAILRGKSYYP++VQCRTILACCLLHN
Sbjct: 253 PENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHN 312

Query: 189 LINREMTYCDDVDDVDKGDSTYATSTASEDIHYIE 220
           LINREMT  D  D++D+ DST+AT TA++DIHYIE
Sbjct: 313 LINREMTNFDIEDNIDEVDSTHAT-TAADDIHYIE 339

[Close]
BLAST of MELO3C032214.2 vs. TrEMBL
Match: tr|A0A1S3C570|A0A1S3C570_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103496992 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 8.9e-76
Identity = 144/206 (69.90%), Postives = 164/206 (79.61%), Query Frame = 0 

Query: 18  FELNNCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYVLIDWEGFAV 77
           + L NCLGALDGTYIKVNVPA +R  +RT K E+AT VL VCDTKGDFVYVL+ WEG A 
Sbjct: 75  YVLQNCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLVGWEGSAA 134

Query: 78  DSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRGAENALTNAK 137
           DSRILRD LSR N L+VPKG+YYL D  YPNAEGFLAPYRGQRY+LQEWRG ENA + +K
Sbjct: 135 DSRILRDALSRPNELKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSK 194

Query: 138 EYFNMKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHNLINREMTYC 197
           E+FNMKHSS R     +     GRWAIL GKSYY ++VQCRTIL CCLLHNLINREMT  
Sbjct: 195 EFFNMKHSSARNVIERAFGVLKGRWAILWGKSYYLVEVQCRTILTCCLLHNLINREMTNF 254

Query: 198 DDVDDVDKGDSTYATSTASEDIHYIE 220
           D  D++D+ DST+AT  A++DIHYIE
Sbjct: 255 DIQDNIDEVDSTHAT-IATDDIHYIE 279

[Close]
BLAST of MELO3C032214.2 vs. TrEMBL
Match: tr|A0A1S3C1U8|A0A1S3C1U8_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103495887 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.6e-69
Identity = 129/193 (66.84%), Postives = 148/193 (76.68%), Query Frame = 0 

Query: 9   RWAWYKFNVFELNNCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYV 68
           RW W++       NCLGALDGTYIKVNV A +R  +RT K E+AT VL  CDTKGDFV+V
Sbjct: 91  RWKWFE-------NCLGALDGTYIKVNVSATDRPRYRTRKGEVATNVLGACDTKGDFVFV 150

Query: 69  LIDWEGFAVDSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRG 128
           L  WEG A DSRILRD +SR N L+VPKG+YYLCDA YPNAEGFLAPYRG+RY+L EWRG
Sbjct: 151 LFGWEGSAADSRILRDAISRHNGLKVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRG 210

Query: 129 AENALTNAKEYFNMKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHN 188
             NA T A+E+FNMKHSS R     +     GRWAILRGKSYYP+ VQCRTI+ACCLLHN
Sbjct: 211 ESNAPTTAREFFNMKHSSARNVIERAFGLLKGRWAILRGKSYYPVDVQCRTIMACCLLHN 270

Query: 189 LINREMTYCDDVD 198
           LINREMT  + ++
Sbjct: 271 LINREMTNSEIIE 276

[Close]
BLAST of MELO3C032214.2 vs. TrEMBL
Match: tr|A0A1S4E5X8|A0A1S4E5X8_CUCME (uncharacterized protein LOC107992265 OS=Cucumis melo OX=3656 GN=LOC107992265 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.1e-55
Identity = 121/215 (56.28%), Postives = 138/215 (64.19%), Query Frame = 0 

Query: 9   RWAWYKFNVFELNNCLGALDGTYIKVNVPAIERLTFRTYKEEIATIVLSVCDTKGDFVYV 68
           RW W++       NCLGALDGTYIKVNVPA                              
Sbjct: 91  RWRWFE-------NCLGALDGTYIKVNVPARS---------------------------- 150

Query: 69  LIDWEGFAVDSRILRDVLSRGNRLQVPKGHYYLCDASYPNAEGFLAPYRGQRYYLQEWRG 128
                  A DSRIL D LSR N L+VPKG+YYL D  YPNAEGFLAPYRGQ Y+LQEWRG
Sbjct: 151 -------AADSRILCDALSRPNGLKVPKGYYYLVDVGYPNAEGFLAPYRGQHYHLQEWRG 210

Query: 129 AENALTNAKEYFNMKHSSTR----MSLSAPSGRWAILRGKSYYPLQVQCRTILACCLLHN 188
            ENA + +KE+FNMKHSS R     +     GRWAILR KSYYP++VQC TILACCLLHN
Sbjct: 211 PENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRKKSYYPVEVQCCTILACCLLHN 262

Query: 189 LINREMTYCDDVDDVDKGDSTYATSTASEDIHYIE 220
           LINREMT  D  D++D+ DST+AT  A++DIHYIE
Sbjct: 271 LINREMTNFDIEDNIDEVDSTHAT-IAADDIHYIE 262

The following BLAST results are available for this feature:
BLAST of MELO3C032214.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33754.12.4e-8578.71retrotransposon protein [Cucumis melo subsp. melo][more]
ADN34114.14.5e-7969.77retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008457266.11.3e-7569.90PREDICTED: putative nuclease HARBI1 [Cucumis melo][more]
XP_008455792.15.5e-6966.84PREDICTED: putative nuclease HARBI1 [Cucumis melo][more]
XP_016903646.17.7e-5556.28PREDICTED: uncharacterized protein LOC107992265 [Cucumis melo][more]
BLAST of MELO3C032214.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G41980.17.7e-2536.63Putative harbinger transposase-derived nuclease (InterPro:IPR006912)[more]
AT5G35695.11.7e-1635.46Putative harbinger transposase-derived nuclease (InterPro:IPR006912)[more]
AT3G55350.12.0e-1228.19PIF / Ping-Pong family of plant transposases[more]
AT1G43722.11.1e-1027.66unknown protein[more]
AT5G28950.11.1e-1034.15unknown protein[more]
BLAST of MELO3C032214.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M2U3|ALPL_ARATH3.5e-1128.19Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1[more]
BLAST of MELO3C032214.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GBB2|E5GBB2_CUCME1.6e-8578.71Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|E5GCB5|E5GCB5_CUCME3.0e-7969.77Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3C570|A0A1S3C570_CUCME8.9e-7669.90putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103496992 PE=4 SV=1[more]
tr|A0A1S3C1U8|A0A1S3C1U8_CUCME3.6e-6966.84putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103495887 PE=4 SV=1[more]
tr|A0A1S4E5X8|A0A1S4E5X8_CUCME5.1e-5556.28uncharacterized protein LOC107992265 OS=Cucumis melo OX=3656 GN=LOC107992265 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027806HARBI1_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032214.2.1MELO3C032214.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 27..184
e-value: 6.2E-17
score: 61.6
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 18..188
NoneNo IPR availablePANTHERPTHR22930:SF112SUBFAMILY NOT NAMEDcoord: 18..188

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C032214.2Cucumber (Gy14) v2cgybmedB203
MELO3C032214.2Cucumber (Gy14) v1cgymedB075
MELO3C032214.2Cucurbita maxima (Rimu)cmamedB345
MELO3C032214.2Cucurbita maxima (Rimu)cmamedB778
MELO3C032214.2Cucurbita moschata (Rifu)cmomedB333
MELO3C032214.2Cucurbita moschata (Rifu)cmomedB775
MELO3C032214.2Cucurbita pepo (Zucchini)cpemedB235
MELO3C032214.2Cucurbita pepo (Zucchini)cpemedB482
MELO3C032214.2Wild cucumber (PI 183967)cpimedB226
MELO3C032214.2Cucumber (Chinese Long) v2cumedB225
MELO3C032214.2Bottle gourd (USVL1VR-Ls)lsimedB387
MELO3C032214.2Bottle gourd (USVL1VR-Ls)lsimedB400
MELO3C032214.2Watermelon (Charleston Gray)medwcgB402
MELO3C032214.2Watermelon (97103) v1medwmB446
MELO3C032214.2Silver-seed gourdcarmedB0482
MELO3C032214.2Silver-seed gourdcarmedB0683
MELO3C032214.2Cucumber (Chinese Long) v3cucmedB232
MELO3C032214.2Watermelon (97103) v2medwmbB416
MELO3C032214.2Wax gourdmedwgoB502
MELO3C032214.2Wax gourdmedwgoB509