MELO3C032185.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032185.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionexosome complex exonuclease RRP44 homolog A
Locationchr06 : 26342532 .. 26343681 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATCACACCTCTATTTATAGGCATGAATTCCTTGGAGCCCAAGCCAAAAAGAGGTTTCTAGAGTTCTACTATTCTAGATATTTATTTCTTATCCTTATCTAAAATAATTCTCTAGAATTCTTTATCCTAAAAAATCTAAGATATTTCTAGTTTTCTTTTTAGTTTACATAATTCTAGAATTTTAATATACTCTTTTAATATCTCTAGAATATTCTAGTTAGTGTTGCTATGTACTTTAACATATCCCACTTGGACAGTATTTATAGTTGATTCGTATTCATGCTAACATTCTAGTTCATCATTTACAGTAACTGCCAAAGTATTCTGTATGCGTTTGTTTTCATAACCCATCATAAGCTAATGACTGAGATTTAGCATAAATGCTTGCTTAAATTGTGTTGACGATTATCTCTAACATTGTGATTCAGCCATTCCAGTGGCTGCTCAGTGGTATCAGAATCATCTTGGTGGTGCTACTCGTGTTCTACTCATAACCAATGAAAGAGAGAATAGGAGAAAGGCTATTGAAGAGGGAATTTGTGCAGAGACAATTATGTTAGATGTTTATTTATTTTTAGCTTTCCTTAAAGCCTCTTGGTGTCTACCATATGGCGTGCTTATAATGATTATGCTTTCTCTCTTGCTCTCAAGTTTTTTATGTCATATGCTTAGCTAACTTGGTTAATTTGTTTGGTGTTTACAGTTGAATCTTATGTTAGATCATTGGGGCAAACTCATTTACTTGATCTGTTAGTGCAAAGTGCAAATGAAGATGCAAATATGGAGGATGTTGAAGATTTGAGGCCATCGAAGAGAAAGGTTCTTTACTCTGAGGTATTATAATGAATATGCTAAACTATATTTATTTCGGGAAAAATACTAGTGTCTTATAAGGATTCTGGTTTTCAACATATCCTACTCTTCTTTCTTCAAGCATAAGCCCATGTCAGAAATTACTTCGTGGTATATATCATCAAGGCAAGCTCCGTGTTAATCGATACAACCCATTTGAAGCGTATGTTGGAGGTGAGAGTATTGGCGATGAAATTATTATTTATGGGCGTACCAACATGAATCGGGCTTTTGATGGTGATGTTGTGGCAGTTGAACTTTTGTCACGGCATGAAGAGAAATCTCTGACATAG

mRNA sequence

ATGAGGATCACACCTCTATTTATAGGCATGAATTCCTTGGAGCCCAAGCCAAAAAGAGCCATTCCAGTGGCTGCTCAGTGGTATCAGAATCATCTTGGTGGTGCTACTCGTGTTCTACTCATAACCAATGAAAGAGAGAATAGGAGAAAGGCTATTGAAGAGGGAATTTGTGCAGAGACAATTATGTTAGATGTTTATTTATTTTTAGCTTTCCTTAAAGCCTCTTGGTGTCTACCATATGGCGTGCTTATAATGATTATGCTTTCTCTCTTGCTCTCAATTGAATCTTATGTTAGATCATTGGGGCAAACTCATTTACTTGATCTGTTAGTGCAAAGTGCAAATGAAGATGCAAATATGGAGGATGTTGAAGATTTGAGGCCATCGAAGAGAAAGGTTCTTTACTCTGAGAAATTACTTCGTGGTATATATCATCAAGGCAAGCTCCGTGTTAATCGATACAACCCATTTGAAGCGTATGTTGGAGGTGAGAGTATTGGCGATGAAATTATTATTTATGGGCGTACCAACATGAATCGGGCTTTTGATGGTGATGTTGTGGCAGTTGAACTTTTGTCACGGCATGAAGAGAAATCTCTGACATAG

Coding sequence (CDS)

ATGAGGATCACACCTCTATTTATAGGCATGAATTCCTTGGAGCCCAAGCCAAAAAGAGCCATTCCAGTGGCTGCTCAGTGGTATCAGAATCATCTTGGTGGTGCTACTCGTGTTCTACTCATAACCAATGAAAGAGAGAATAGGAGAAAGGCTATTGAAGAGGGAATTTGTGCAGAGACAATTATGTTAGATGTTTATTTATTTTTAGCTTTCCTTAAAGCCTCTTGGTGTCTACCATATGGCGTGCTTATAATGATTATGCTTTCTCTCTTGCTCTCAATTGAATCTTATGTTAGATCATTGGGGCAAACTCATTTACTTGATCTGTTAGTGCAAAGTGCAAATGAAGATGCAAATATGGAGGATGTTGAAGATTTGAGGCCATCGAAGAGAAAGGTTCTTTACTCTGAGAAATTACTTCGTGGTATATATCATCAAGGCAAGCTCCGTGTTAATCGATACAACCCATTTGAAGCGTATGTTGGAGGTGAGAGTATTGGCGATGAAATTATTATTTATGGGCGTACCAACATGAATCGGGCTTTTGATGGTGATGTTGTGGCAGTTGAACTTTTGTCACGGCATGAAGAGAAATCTCTGACATAG

Protein sequence

MRITPLFIGMNSLEPKPKRAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCLPYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEKLLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAVELLSRHEEKSLT
Homology
[Close]
BLAST of MELO3C032185.2 vs. NCBI nr
Match: XP_008454914.1 (PREDICTED: exosome complex exonuclease RRP44 homolog A [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 9.6e-65
Identity = 144/195 (73.85%), Postives = 145/195 (74.36%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VAA WYQNHLGGATRVLLITN+RENRRKAIEEGICAET                  
Sbjct: 135 RAIRVAALWYQNHLGGATRVLLITNDRENRRKAIEEGICAET------------------ 194

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSE 
Sbjct: 195 ---------------IESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEH 254

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIYGRTNMNRAFDGDVVAV
Sbjct: 255 KPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAV 296

Query: 199 ELLSR---HEEKSLT 202
           ELLSR   HEEKSLT
Sbjct: 315 ELLSRDQWHEEKSLT 296

[Close]
BLAST of MELO3C032185.2 vs. NCBI nr
Match: XP_023554295.1 (exosome complex exonuclease RRP44 homolog A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.8 bits (647), Expect = 4.8e-64
Identity = 141/195 (72.31%), Postives = 145/195 (74.36%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VAAQWYQNH+GGATRVLLITN+RENRRKA+EEGICAET                  
Sbjct: 135 RAIRVAAQWYQNHIGGATRVLLITNDRENRRKAVEEGICAET------------------ 194

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IESYVRSLGQTHLLDLLVQSANEDANME+VEDLRPSKRKVLY E 
Sbjct: 195 ---------------IESYVRSLGQTHLLDLLVQSANEDANMEEVEDLRPSKRKVLYFEH 254

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIYGRTNMNRAFDGDVVAV
Sbjct: 255 KPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAV 296

Query: 199 ELLSR---HEEKSLT 202
           ELLSR   HEEKSLT
Sbjct: 315 ELLSRDQWHEEKSLT 296

[Close]
BLAST of MELO3C032185.2 vs. NCBI nr
Match: XP_011658916.1 (PREDICTED: exosome complex exonuclease RRP44 [Cucumis sativus] >KGN43951.1 hypothetical protein Csa_7G074840 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 8.1e-64
Identity = 143/195 (73.33%), Postives = 145/195 (74.36%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VAAQWYQNHLGGATRVLLITN+RENRRKAIEEGI AET                  
Sbjct: 135 RAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAET------------------ 194

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IESYV+SLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSE 
Sbjct: 195 ---------------IESYVKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEH 254

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIYGRTNMNRAFDGDVVAV
Sbjct: 255 KPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAV 296

Query: 199 ELLSR---HEEKSLT 202
           ELLSR   HEEKSLT
Sbjct: 315 ELLSRDQWHEEKSLT 296

[Close]
BLAST of MELO3C032185.2 vs. NCBI nr
Match: XP_022972336.1 (exosome complex exonuclease RRP44 homolog A-like [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 8.1e-64
Identity = 140/195 (71.79%), Postives = 145/195 (74.36%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VAAQWYQNH+GGATRVLLITN+RENRRKA+EEGICAET                  
Sbjct: 135 RAIRVAAQWYQNHIGGATRVLLITNDRENRRKAVEEGICAET------------------ 194

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IESYVRSLGQTHLLDLLVQSANEDANME+VED+RPSKRKVLY E 
Sbjct: 195 ---------------IESYVRSLGQTHLLDLLVQSANEDANMEEVEDMRPSKRKVLYFEH 254

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIYGRTNMNRAFDGDVVAV
Sbjct: 255 KPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAV 296

Query: 199 ELLSR---HEEKSLT 202
           ELLSR   HEEKSLT
Sbjct: 315 ELLSRDQWHEEKSLT 296

[Close]
BLAST of MELO3C032185.2 vs. NCBI nr
Match: XP_022952404.1 (exosome complex exonuclease RRP44 homolog A-like [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 2.4e-63
Identity = 139/195 (71.28%), Postives = 144/195 (73.85%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VAAQWYQNH+GGATRVLLITN+RENRRKA+EEGICAET                  
Sbjct: 135 RAIRVAAQWYQNHIGGATRVLLITNDRENRRKAVEEGICAET------------------ 194

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IESYVRSLGQTHLLDLLVQSANED NME+VED+RPSKRKVLY E 
Sbjct: 195 ---------------IESYVRSLGQTHLLDLLVQSANEDTNMEEVEDMRPSKRKVLYFEH 254

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIYGRTNMNRAFDGDVVAV
Sbjct: 255 KPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAV 296

Query: 199 ELLSR---HEEKSLT 202
           ELLSR   HEEKSLT
Sbjct: 315 ELLSRDQWHEEKSLT 296

[Close]
BLAST of MELO3C032185.2 vs. TAIR10
Match: AT2G17510.2 (ribonuclease II family protein)

HSP 1 Score: 197.2 bits (500), Expect = 9.6e-51
Identity = 109/195 (55.90%), Postives = 127/195 (65.13%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VA  WYQ HLG  ++VLL+TN+REN+RKA EEGI AET                  
Sbjct: 178 RAIRVATLWYQKHLGDTSQVLLVTNDRENKRKATEEGISAET------------------ 237

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IE+YV+SLGQ  LLDLL Q  NED  MED +D RPSKRK++Y E 
Sbjct: 238 ---------------IEAYVKSLGQPELLDLLAQPTNEDITMEDADDSRPSKRKLIYQEH 297

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNR+NP+EAYVG ESIG+EIIIYGR+NMNRAFDGD+VAV
Sbjct: 298 KPMSEITAGLHRGIYHQGKLRVNRFNPYEAYVGSESIGEEIIIYGRSNMNRAFDGDIVAV 339

Query: 199 ELLSR---HEEKSLT 202
           ELL R    +EK+L+
Sbjct: 358 ELLPRDQWQDEKALS 339

[Close]
BLAST of MELO3C032185.2 vs. Swiss-Prot
Match: sp|Q9SHL7|RP44A_ARATH (Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana OX=3702 GN=RRP44A PE=2 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-49
Identity = 109/195 (55.90%), Postives = 127/195 (65.13%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VA  WYQ HLG  ++VLL+TN+REN+RKA EEGI AET                  
Sbjct: 133 RAIRVATLWYQKHLGDTSQVLLVTNDRENKRKATEEGISAET------------------ 192

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IE+YV+SLGQ  LLDLL Q  NED  MED +D RPSKRK++Y E 
Sbjct: 193 ---------------IEAYVKSLGQPELLDLLAQPTNEDITMEDADDSRPSKRKLIYQEH 252

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNR+NP+EAYVG ESIG+EIIIYGR+NMNRAFDGD+VAV
Sbjct: 253 KPMSEITAGLHRGIYHQGKLRVNRFNPYEAYVGSESIGEEIIIYGRSNMNRAFDGDIVAV 294

Query: 199 ELLSR---HEEKSLT 202
           ELL R    +EK+L+
Sbjct: 313 ELLPRDQWQDEKALS 294

[Close]
BLAST of MELO3C032185.2 vs. Swiss-Prot
Match: sp|Q9CSH3|RRP44_MOUSE (Exosome complex exonuclease RRP44 OS=Mus musculus OX=10090 GN=Dis3 PE=1 SV=4)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 67/196 (34.18%), Postives = 92/196 (46.94%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHL-----GGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLK 78
           RAI VAA+WY  HL         +V+LITN+R+N+ KA++EGI A T             
Sbjct: 147 RAIRVAAKWYNEHLKRVAADSQLQVILITNDRKNKEKAVQEGIPAFT------------- 206

Query: 79  ASWCLPYGVLIMIMLSLLLSIESYVRSL-GQTHLLDLLVQSANEDANMEDVEDLRPSKRK 138
                                E YV+SL     L+D L   ++E   M ++E       K
Sbjct: 207 --------------------CEEYVKSLTANPELIDRLAYLSDE---MNEIE-----SGK 266

Query: 139 VLYSE-----KLLRGI----YHQGKLRVNRYNPFEAYV---GGESIGDEIIIYGRTNMNR 197
           +++SE     KL +GI    Y QG  R +R N  EA V   G +    EI+I G  ++NR
Sbjct: 267 IIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNR 301

[Close]
BLAST of MELO3C032185.2 vs. Swiss-Prot
Match: sp|Q9Y2L1|RRP44_HUMAN (Exosome complex exonuclease RRP44 OS=Homo sapiens OX=9606 GN=DIS3 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 4.9e-12
Identity = 66/196 (33.67%), Postives = 86/196 (43.88%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHL-----GGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLK 78
           RAI VAA+WY  HL         +V+ ITN+R N+ KAIEEGI A T             
Sbjct: 147 RAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFT------------- 206

Query: 79  ASWCLPYGVLIMIMLSLLLSIESYVRSL-GQTHLLDLLVQSANEDANMEDVEDLRPSKRK 138
                                E YV+SL     L+D L   + E   +E          K
Sbjct: 207 --------------------CEEYVKSLTANPELIDRLACLSEEGNEIE--------SGK 266

Query: 139 VLYSE-----KLLRGI----YHQGKLRVNRYNPFEAYV---GGESIGDEIIIYGRTNMNR 197
           +++SE     KL +GI    Y QG  R +R N  EA V   G      EII+ G  ++NR
Sbjct: 267 IIFSEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWIHGDNEENKEIILQGLKHLNR 301

[Close]
BLAST of MELO3C032185.2 vs. Swiss-Prot
Match: sp|P37202|DIS3_SCHPO (Exosome complex exonuclease dis3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dis3 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.0e-10
Identity = 49/189 (25.93%), Postives = 88/189 (46.56%), Query Frame = 0 

Query: 12  SLEPKPKRAIPVAAQWYQNHLGG-ATRVLLITNERENRRKAIEEGICAETIMLDVYLFLA 71
           S   +  RAI  AA W+ +HL     +++L+T++REN R A E+GI   T+   V     
Sbjct: 160 SANDRNDRAIRNAASWFASHLASLGIKIVLLTDDRENARLAAEQGIQVSTLKDYVQY--- 219

Query: 72  FLKASWCLPYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSK 131
                  LP   +++ M+S                + D +      ++  ++V +L  S 
Sbjct: 220 -------LPDSEILLDMVSA---------------IADAIASKEQVESGTKNVYELHWSM 279

Query: 132 RKVLYSEKLLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAVE 191
            ++L   K   G  H+G + ++ YN  E  V        +++ GR N+NRA  GD+V ++
Sbjct: 280 SRLLACIK--NGEVHKGLINISTYNYLEGSVVVPGYNKPVLVSGRENLNRAVQGDIVCIQ 321

Query: 192 LLSRHEEKS 200
           +L + + K+
Sbjct: 340 ILPQDQWKT 321

[Close]
BLAST of MELO3C032185.2 vs. Swiss-Prot
Match: sp|Q08162|RRP44_YEAST (Exosome complex exonuclease DIS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DIS3 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-07
Identity = 50/192 (26.04%), Postives = 83/192 (43.23%), Query Frame = 0 

Query: 12  SLEPKPKRAIPVAAQWYQNHLGG-ATRVLLITNERENRR---KAIEEGICAETIMLDVYL 71
           ++  +  RAI    QWY  HL      V+L+TN+R NR    K +E  I  ++++     
Sbjct: 165 TINDRNDRAIRKTCQWYSEHLKPYDINVVLVTNDRLNREAATKEVESNIITKSLVQ---- 224

Query: 72  FLAFLKASWCLPYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLR 131
                               + LL + +    S+ Q   +D   +    D   +      
Sbjct: 225 -------------------YIELLPNADDIRDSIPQ---MDSFDKDLERDTFSDFTFPEY 284

Query: 132 PSKRKVLYSEKLLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVV 191
            S  +V+    L  G+ +QG ++++ YN  E  V        ++I G+ N+NRAF+GD V
Sbjct: 285 YSTARVMGG--LKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGDQV 328

Query: 192 AVELLSRHEEKS 200
            VELL + E K+
Sbjct: 345 IVELLPQSEWKA 328

[Close]
BLAST of MELO3C032185.2 vs. TrEMBL
Match: tr|A0A1S3BZS3|A0A1S3BZS3_CUCME (exosome complex exonuclease RRP44 homolog A OS=Cucumis melo OX=3656 GN=LOC103495216 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 6.4e-65
Identity = 144/195 (73.85%), Postives = 145/195 (74.36%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VAA WYQNHLGGATRVLLITN+RENRRKAIEEGICAET                  
Sbjct: 135 RAIRVAALWYQNHLGGATRVLLITNDRENRRKAIEEGICAET------------------ 194

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSE 
Sbjct: 195 ---------------IESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEH 254

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIYGRTNMNRAFDGDVVAV
Sbjct: 255 KPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAV 296

Query: 199 ELLSR---HEEKSLT 202
           ELLSR   HEEKSLT
Sbjct: 315 ELLSRDQWHEEKSLT 296

[Close]
BLAST of MELO3C032185.2 vs. TrEMBL
Match: tr|A0A0A0K821|A0A0A0K821_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074840 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.4e-64
Identity = 143/195 (73.33%), Postives = 145/195 (74.36%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VAAQWYQNHLGGATRVLLITN+RENRRKAIEEGI AET                  
Sbjct: 135 RAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAET------------------ 194

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IESYV+SLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSE 
Sbjct: 195 ---------------IESYVKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEH 254

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIYGRTNMNRAFDGDVVAV
Sbjct: 255 KPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAV 296

Query: 199 ELLSR---HEEKSLT 202
           ELLSR   HEEKSLT
Sbjct: 315 ELLSRDQWHEEKSLT 296

[Close]
BLAST of MELO3C032185.2 vs. TrEMBL
Match: tr|A0A0A0L2I2|A0A0A0L2I2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G089000 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.6e-60
Identity = 134/188 (71.28%), Postives = 138/188 (73.40%), Query Frame = 0 

Query: 26  QWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCLPYGVLIM 85
           +WYQNHLGGAT VLLITN+RENRR+A+EEGICAET                         
Sbjct: 113 EWYQNHLGGATCVLLITNDRENRRRAMEEGICAET------------------------- 172

Query: 86  IMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK------- 145
                   IESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSE        
Sbjct: 173 --------IESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEIA 232

Query: 146 --LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAVELLSR-- 202
             L RGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIY RTNMNRAFDGDVVAVELLSR  
Sbjct: 233 SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQ 267

[Close]
BLAST of MELO3C032185.2 vs. TrEMBL
Match: tr|A0A2I4DUW3|A0A2I4DUW3_9ROSI (exosome complex exonuclease RRP44 homolog A OS=Juglans regia OX=51240 GN=LOC108983674 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.1e-55
Identity = 126/195 (64.62%), Postives = 138/195 (70.77%), Query Frame = 0 

Query: 19  RAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYLFLAFLKASWCL 78
           RAI VAAQWYQNHLGGA RVLLITN+REN+RKAIEEGI AET                  
Sbjct: 135 RAIRVAAQWYQNHLGGAARVLLITNDRENKRKAIEEGISAET------------------ 194

Query: 79  PYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEK 138
                          IESYV+SL Q +LLDLLVQ A+ED NME+VEDLRPSKRKV+Y+E 
Sbjct: 195 ---------------IESYVKSLDQPNLLDLLVQPASEDVNMEEVEDLRPSKRKVIYAEH 254

Query: 139 ---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNMNRAFDGDVVAV 198
                    L RGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIYGR NMNRAFDGD+VAV
Sbjct: 255 KPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRANMNRAFDGDIVAV 296

Query: 199 ELLSR---HEEKSLT 202
           ELL +   +EEKSL+
Sbjct: 315 ELLPQDQWYEEKSLS 296

[Close]
BLAST of MELO3C032185.2 vs. TrEMBL
Match: tr|A0A1Q3DG53|A0A1Q3DG53_CEPFO (RNB domain-containing protein/PIN_4 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34826 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.0e-55
Identity = 124/206 (60.19%), Postives = 140/206 (67.96%), Query Frame = 0 

Query: 8   IGMNSLEPKPKRAIPVAAQWYQNHLGGATRVLLITNERENRRKAIEEGICAETIMLDVYL 67
           +G  S   +  RAI VA +WYQ+HLGG TRVLL+TN+REN+RKAIE+GI AET       
Sbjct: 122 VGGESPNDRNDRAIRVATRWYQSHLGGETRVLLLTNDRENKRKAIEDGISAET------- 181

Query: 68  FLAFLKASWCLPYGVLIMIMLSLLLSIESYVRSLGQTHLLDLLVQSANEDANMEDVEDLR 127
                                     IESYV+S+GQ  LLDLLVQ A+ED  M+DVEDLR
Sbjct: 182 --------------------------IESYVKSMGQPDLLDLLVQPASEDVTMDDVEDLR 241

Query: 128 PSKRKVLYSEK---------LLRGIYHQGKLRVNRYNPFEAYVGGESIGDEIIIYGRTNM 187
           PSKRK LY+E          LLRGIYHQGKLRVNRYNPFEAYVG ESIGDEIIIYGR NM
Sbjct: 242 PSKRKTLYTEHKPMSEITSGLLRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRGNM 294

Query: 188 NRAFDGDVVAVELLSR---HEEKSLT 202
           NRAFDGD+VAVELL +   HEEKSL+
Sbjct: 302 NRAFDGDIVAVELLPQDQWHEEKSLS 294

The following BLAST results are available for this feature:
BLAST of MELO3C032185.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008454914.19.6e-6573.85PREDICTED: exosome complex exonuclease RRP44 homolog A [Cucumis melo][more]
XP_023554295.14.8e-6472.31exosome complex exonuclease RRP44 homolog A-like [Cucurbita pepo subsp. pepo][more]
XP_011658916.18.1e-6473.33PREDICTED: exosome complex exonuclease RRP44 [Cucumis sativus] >KGN43951.1 hypot... [more]
XP_022972336.18.1e-6471.79exosome complex exonuclease RRP44 homolog A-like [Cucurbita maxima][more]
XP_022952404.12.4e-6371.28exosome complex exonuclease RRP44 homolog A-like [Cucurbita moschata][more]
BLAST of MELO3C032185.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17510.29.6e-5155.90ribonuclease II family protein[more]
BLAST of MELO3C032185.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SHL7|RP44A_ARATH1.7e-4955.90Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana OX=3702 GN=R... [more]
sp|Q9CSH3|RRP44_MOUSE1.3e-1234.18Exosome complex exonuclease RRP44 OS=Mus musculus OX=10090 GN=Dis3 PE=1 SV=4[more]
sp|Q9Y2L1|RRP44_HUMAN4.9e-1233.67Exosome complex exonuclease RRP44 OS=Homo sapiens OX=9606 GN=DIS3 PE=1 SV=2[more]
sp|P37202|DIS3_SCHPO6.0e-1025.93Exosome complex exonuclease dis3 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
sp|Q08162|RRP44_YEAST2.8e-0726.04Exosome complex exonuclease DIS3 OS=Saccharomyces cerevisiae (strain ATCC 204508... [more]
BLAST of MELO3C032185.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BZS3|A0A1S3BZS3_CUCME6.4e-6573.85exosome complex exonuclease RRP44 homolog A OS=Cucumis melo OX=3656 GN=LOC103495... [more]
tr|A0A0A0K821|A0A0A0K821_CUCSA5.4e-6473.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074840 PE=3 SV=1[more]
tr|A0A0A0L2I2|A0A0A0L2I2_CUCSA3.6e-6071.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G089000 PE=4 SV=1[more]
tr|A0A2I4DUW3|A0A2I4DUW3_9ROSI2.1e-5564.62exosome complex exonuclease RRP44 homolog A OS=Juglans regia OX=51240 GN=LOC1089... [more]
tr|A0A1Q3DG53|A0A1Q3DG53_CEPFO6.0e-5560.19RNB domain-containing protein/PIN_4 domain-containing protein OS=Cephalotus foll... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR033771Rrp44_CSD1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032185.2.1MELO3C032185.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033771Rrp44-like cold shock domainPFAMPF17216Rrp44_CSD1coord: 139..198
e-value: 1.5E-8
score: 34.4
NoneNo IPR availableGENE3DG3DSA:3.40.50.1010coord: 10..73
e-value: 5.5E-8
score: 34.5
NoneNo IPR availableGENE3DG3DSA:2.40.50.690coord: 131..201
e-value: 7.2E-19
score: 69.5
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 16..196
NoneNo IPR availablePANTHERPTHR23355:SF35EXOSOME COMPLEX EXONUCLEASE RRP44coord: 16..196
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILYSSF50249Nucleic acid-binding proteinscoord: 138..198