MELO3C032060.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTACTAAGTTTAGGGTATTAGTAAGTGCGTAATAAGCTTTAATTACGATTTTTCCCAATGTATATGGATATTGTACTAATTCACTTAGTACATATTTTTAGGAAACTTTACATAGTTTGTAATAGACCAACAAACACTTCTTGGCGCCCTAACTGCGTTCACGCTGGCCCAACGTCAGATCTTACTAACGTTGGAGCTACTAATGAACGACAATAGGCGTATGACATATACACCGTCCGATACACGCCATAGAATAAGGCAGCTTGCATACTTTCACATGATACACGAGTTAGATCTTGTGTGTCGCCAAAGCACGCGAATGGACAGGCGAACATTCGCAATTCTATGTCATTTACTTCGGACTGTCTCTGGTCTTTCGTCTACCGAGATTGTCGACGTCGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCCCATGACGTGAAGAACCGCGTAATTCAAAGGAAATTTGTACGGTTCGGTGAGACAGTATCGCGACATTTTAACCTTGTACTATTGGTTGTCGTCCGACTATACGAGAAGTTGATAAAGCGGCCTGTTCCGGTGACAAACAACTACAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATGCTACAAGTTTAATATATTTGACCTTAATGTACATGGCACTTATATCGACGTGTTTATTACAACCTGCAGAATTGCCTTGGCGCATTAGACGAGACGTACATAAAGATGAACATCCCCACAACAGATCGACCTACATTTAGAACACATAAGGGGAAAATTGCCACGAACGTACTAGGCGTGTGCGACACGAAAGGGGTCGTTTATGTCCTCGCCGGTTGGGAAGGATCAGCGGCAGACTCGCGGATTCTACGTGATGCTCTGTCACGAGAAAATGTACTACAAGTGCCAAAGGGTATATCTTATTTATAATAAAACAACGCCGCTTTCTACTTACCTATTCGAAGCGCTTAAACGAGTATTTTAATAACAGGATATTATTATCTGTGCGATGTGGGTTATCAAAACGCGGAGGGATTTTTGGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGGAGGAAATGTGCCAACAAATGCTAAAGAGTACTTCAACATGAAGAACTCCTCAGCAAGGAATGTCATTGAGCGCGCCTTCGGTGTTCTTAAGGGTCGTTGGGCCATTCTTCGTGGGAAGTCCTACTATCCCCTGAAAGTCCAGTGTCGCACCATACTAGCATGTTTCTTGCTCCACAATTTGATCAACAGAGAAATGACATATTGCGACGACGTTGACGACGTGGACGAGGGAGACTCCACGTACGCAGCGATCACTGCTTCATAAGACATTCAGTATATTGAGATGACAAACGAGTGGTCTCAGTGGCGCGACGAACTAGCCGAATCGATGCTCACTGATTGGCAGTTGCGTAACGCTTAGATAAGACAATTTTACATTAGAAGTCATCGATTGTATGCGAATTTCTATCACCTGTAAAATGTACTGTTGCATATGAAATGTACGCGTGCCTTTTATTTTGAACTGTTAAATGTGAAATTGTGAAATTACTAACGTACTCCATGTATTTTTTGTAATTTGTCATTCTCAGTATGCCAACTTCAAACCGTGCCTCGAGACATGTCTGGACGAAGGAGGAGGAGGACACTCTTGTGGAGTGTTTAATGGACTTGGTGTCAATGGGGGGATGAAAATTGGATAA ATTACTAAGTTTAGGGTATTAGTAAGTGCGTAATAAGCTTTAATTACGATTTTTCCCAATGTATATGGATATTGTACTAATTCACTTAGTACATATTTTTAGGAAACTTTACATAGTTTGTAATAGACCAACAAACACTTCTTGGCGCCCTAACTGCGTTCACGCTGGCCCAACGTCAGATCTTACTAACGTTGGAGCTACTAATGAACGACAATAGGCGTATGACATATACACCGTCCGATACACGCCATAGAATAAGGCAGCTTGCATACTTTCACATGATACACGAGTTAGATCTTGTGTGTCGCCAAAGCACGCGAATGGACAGGCGAACATTCGCAATTCTATGTCATTTACTTCGGACTGTCTCTGGTCTTTCGTCTACCGAGATTGTCGACGTCGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCCCATGACGTGAAGAACCGCGTAATTCAAAGGAAATTTGTACGGTTCGGTGAGACAGTATCGCGACATTTTAACCTTGTACTATTGGTTGTCGTCCGACTATACGAGAAGTTGATAAAGCGGCCTGTTCCGGTGACAAACAACTACAATGATCAACGTTGGAAGTGTTTCGAGTATGCCAACTTCAAACCGTGCCTCGAGACATGTCTGGACGAAGGAGGAGGAGGACACTCTTGTGGAGTGTTTAATGGACTTGGTGTCAATGGGGGGATGAAAATTGGATAA ATGAACGACAATAGGCGTATGACATATACACCGTCCGATACACGCCATAGAATAAGGCAGCTTGCATACTTTCACATGATACACGAGTTAGATCTTGTGTGTCGCCAAAGCACGCGAATGGACAGGCGAACATTCGCAATTCTATGTCATTTACTTCGGACTGTCTCTGGTCTTTCGTCTACCGAGATTGTCGACGTCGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCCCATGACGTGAAGAACCGCGTAATTCAAAGGAAATTTGTACGGTTCGGTGAGACAGTATCGCGACATTTTAACCTTGTACTATTGGTTGTCGTCCGACTATACGAGAAGTTGATAAAGCGGCCTGTTCCGGTGACAAACAACTACAATGATCAACGTTGGAAGTGTTTCGAGTATGCCAACTTCAAACCGTGCCTCGAGACATGTCTGGACGAAGGAGGAGGAGGACACTCTTGTGGAGTGTTTAATGGACTTGGTGTCAATGGGGGGATGAAAATTGGATAA MNDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPVPVTNNYNDQRWKCFEYANFKPCLETCLDEGGGGHSCGVFNGLGVNGGMKIG
BLAST of MELO3C032060.2 vs. NCBI nr
Match: XP_016899496.1 (PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo]) HSP 1 Score: 240.7 bits (613), Expect = 3.6e-60 Identity = 122/135 (90.37%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of MELO3C032060.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 199.9 bits (507), Expect = 7.0e-48 Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of MELO3C032060.2 vs. NCBI nr
Match: XP_008454692.1 (PREDICTED: uncharacterized protein LOC103495048 [Cucumis melo]) HSP 1 Score: 199.5 bits (506), Expect = 9.1e-48 Identity = 94/134 (70.15%), Postives = 116/134 (86.57%), Query Frame = 0
BLAST of MELO3C032060.2 vs. NCBI nr
Match: XP_008463581.1 (PREDICTED: uncharacterized protein LOC103501690 [Cucumis melo]) HSP 1 Score: 189.5 bits (480), Expect = 9.4e-45 Identity = 94/135 (69.63%), Postives = 112/135 (82.96%), Query Frame = 0
BLAST of MELO3C032060.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 152.1 bits (383), Expect = 1.7e-33 Identity = 76/134 (56.72%), Postives = 97/134 (72.39%), Query Frame = 0
BLAST of MELO3C032060.2 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912)) HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|A0A1S4DU32|A0A1S4DU32_CUCME (uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 2.4e-60 Identity = 122/135 (90.37%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 4.6e-48 Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|A0A1S3BYR8|A0A1S3BYR8_CUCME (uncharacterized protein LOC103495048 OS=Cucumis melo OX=3656 GN=LOC103495048 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 6.0e-48 Identity = 94/134 (70.15%), Postives = 116/134 (86.57%), Query Frame = 0
BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|A0A1S3CL59|A0A1S3CL59_CUCME (uncharacterized protein LOC103501690 OS=Cucumis melo OX=3656 GN=LOC103501690 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.2e-45 Identity = 94/135 (69.63%), Postives = 112/135 (82.96%), Query Frame = 0
BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.1e-33 Identity = 76/134 (56.72%), Postives = 97/134 (72.39%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |