MELO3C032060.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C032060.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTransmembrane protein, putative
Locationchr06 : 16724174 .. 16725898 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTACTAAGTTTAGGGTATTAGTAAGTGCGTAATAAGCTTTAATTACGATTTTTCCCAATGTATATGGATATTGTACTAATTCACTTAGTACATATTTTTAGGAAACTTTACATAGTTTGTAATAGACCAACAAACACTTCTTGGCGCCCTAACTGCGTTCACGCTGGCCCAACGTCAGATCTTACTAACGTTGGAGCTACTAATGAACGACAATAGGCGTATGACATATACACCGTCCGATACACGCCATAGAATAAGGCAGCTTGCATACTTTCACATGATACACGAGTTAGATCTTGTGTGTCGCCAAAGCACGCGAATGGACAGGCGAACATTCGCAATTCTATGTCATTTACTTCGGACTGTCTCTGGTCTTTCGTCTACCGAGATTGTCGACGTCGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCCCATGACGTGAAGAACCGCGTAATTCAAAGGAAATTTGTACGGTTCGGTGAGACAGTATCGCGACATTTTAACCTTGTACTATTGGTTGTCGTCCGACTATACGAGAAGTTGATAAAGCGGCCTGTTCCGGTGACAAACAACTACAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATGCTACAAGTTTAATATATTTGACCTTAATGTACATGGCACTTATATCGACGTGTTTATTACAACCTGCAGAATTGCCTTGGCGCATTAGACGAGACGTACATAAAGATGAACATCCCCACAACAGATCGACCTACATTTAGAACACATAAGGGGAAAATTGCCACGAACGTACTAGGCGTGTGCGACACGAAAGGGGTCGTTTATGTCCTCGCCGGTTGGGAAGGATCAGCGGCAGACTCGCGGATTCTACGTGATGCTCTGTCACGAGAAAATGTACTACAAGTGCCAAAGGGTATATCTTATTTATAATAAAACAACGCCGCTTTCTACTTACCTATTCGAAGCGCTTAAACGAGTATTTTAATAACAGGATATTATTATCTGTGCGATGTGGGTTATCAAAACGCGGAGGGATTTTTGGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGGAGGAAATGTGCCAACAAATGCTAAAGAGTACTTCAACATGAAGAACTCCTCAGCAAGGAATGTCATTGAGCGCGCCTTCGGTGTTCTTAAGGGTCGTTGGGCCATTCTTCGTGGGAAGTCCTACTATCCCCTGAAAGTCCAGTGTCGCACCATACTAGCATGTTTCTTGCTCCACAATTTGATCAACAGAGAAATGACATATTGCGACGACGTTGACGACGTGGACGAGGGAGACTCCACGTACGCAGCGATCACTGCTTCATAAGACATTCAGTATATTGAGATGACAAACGAGTGGTCTCAGTGGCGCGACGAACTAGCCGAATCGATGCTCACTGATTGGCAGTTGCGTAACGCTTAGATAAGACAATTTTACATTAGAAGTCATCGATTGTATGCGAATTTCTATCACCTGTAAAATGTACTGTTGCATATGAAATGTACGCGTGCCTTTTATTTTGAACTGTTAAATGTGAAATTGTGAAATTACTAACGTACTCCATGTATTTTTTGTAATTTGTCATTCTCAGTATGCCAACTTCAAACCGTGCCTCGAGACATGTCTGGACGAAGGAGGAGGAGGACACTCTTGTGGAGTGTTTAATGGACTTGGTGTCAATGGGGGGATGAAAATTGGATAA

mRNA sequence

ATTACTAAGTTTAGGGTATTAGTAAGTGCGTAATAAGCTTTAATTACGATTTTTCCCAATGTATATGGATATTGTACTAATTCACTTAGTACATATTTTTAGGAAACTTTACATAGTTTGTAATAGACCAACAAACACTTCTTGGCGCCCTAACTGCGTTCACGCTGGCCCAACGTCAGATCTTACTAACGTTGGAGCTACTAATGAACGACAATAGGCGTATGACATATACACCGTCCGATACACGCCATAGAATAAGGCAGCTTGCATACTTTCACATGATACACGAGTTAGATCTTGTGTGTCGCCAAAGCACGCGAATGGACAGGCGAACATTCGCAATTCTATGTCATTTACTTCGGACTGTCTCTGGTCTTTCGTCTACCGAGATTGTCGACGTCGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCCCATGACGTGAAGAACCGCGTAATTCAAAGGAAATTTGTACGGTTCGGTGAGACAGTATCGCGACATTTTAACCTTGTACTATTGGTTGTCGTCCGACTATACGAGAAGTTGATAAAGCGGCCTGTTCCGGTGACAAACAACTACAATGATCAACGTTGGAAGTGTTTCGAGTATGCCAACTTCAAACCGTGCCTCGAGACATGTCTGGACGAAGGAGGAGGAGGACACTCTTGTGGAGTGTTTAATGGACTTGGTGTCAATGGGGGGATGAAAATTGGATAA

Coding sequence (CDS)

ATGAACGACAATAGGCGTATGACATATACACCGTCCGATACACGCCATAGAATAAGGCAGCTTGCATACTTTCACATGATACACGAGTTAGATCTTGTGTGTCGCCAAAGCACGCGAATGGACAGGCGAACATTCGCAATTCTATGTCATTTACTTCGGACTGTCTCTGGTCTTTCGTCTACCGAGATTGTCGACGTCGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCCCATGACGTGAAGAACCGCGTAATTCAAAGGAAATTTGTACGGTTCGGTGAGACAGTATCGCGACATTTTAACCTTGTACTATTGGTTGTCGTCCGACTATACGAGAAGTTGATAAAGCGGCCTGTTCCGGTGACAAACAACTACAATGATCAACGTTGGAAGTGTTTCGAGTATGCCAACTTCAAACCGTGCCTCGAGACATGTCTGGACGAAGGAGGAGGAGGACACTCTTGTGGAGTGTTTAATGGACTTGGTGTCAATGGGGGGATGAAAATTGGATAA

Protein sequence

MNDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPVPVTNNYNDQRWKCFEYANFKPCLETCLDEGGGGHSCGVFNGLGVNGGMKIG
BLAST of MELO3C032060.2 vs. NCBI nr
Match: XP_016899496.1 (PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo])

HSP 1 Score: 240.7 bits (613), Expect = 3.6e-60
Identity = 122/135 (90.37%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1   MNDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSS 60
           MNDNRR+TYTP DT +RIRQLAYF MIHE DLVCRQSTRMDRRTFAILCHLLRTVS LSS
Sbjct: 28  MNDNRRITYTPFDTCNRIRQLAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRTVSVLSS 87

Query: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPV 120
            EI+DVEEMVAMFLHVLAHDVKN VIQRKFVR GETVSRHFNLVLLVVVRLYEKLIKRPV
Sbjct: 88  IEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRSGETVSRHFNLVLLVVVRLYEKLIKRPV 147

Query: 121 PVTNNYNDQRWKCFE 136
            VTNN NDQRWKCFE
Sbjct: 148 SVTNNCNDQRWKCFE 162

BLAST of MELO3C032060.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 199.9 bits (507), Expect = 7.0e-48
Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 0

Query: 26  MIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85
           MIHE DLVCRQSTRMDRRTFAILCHLLR V+GLSSTEIVDVEEMVAMFLHVLAHDVKNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 86  IQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPVPVTNNYNDQRWKCFE 136
           IQ++FVR GETVSRHFN+VLL V+RLYE+LIKRPVPVT+N NDQRWKCFE
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE 110

BLAST of MELO3C032060.2 vs. NCBI nr
Match: XP_008454692.1 (PREDICTED: uncharacterized protein LOC103495048 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 9.1e-48
Identity = 94/134 (70.15%), Postives = 116/134 (86.57%), Query Frame = 0

Query: 2   NDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSST 61
           ND +R+T+ P + RHRIRQLAYF MIH  DLVCRQSTRMD+R FAILCHLLRT++ L+ST
Sbjct: 29  NDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTST 88

Query: 62  EIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPVP 121
           E+VDVEEMVAM+LH+LAHDVKNRVIQR+F+R GE +SRHFN+VLL V+RL+ +L+K+P P
Sbjct: 89  EVVDVEEMVAMYLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQP 148

Query: 122 VTNNYNDQRWKCFE 136
           V N+  DQRW+ FE
Sbjct: 149 VPNDCTDQRWRWFE 162

BLAST of MELO3C032060.2 vs. NCBI nr
Match: XP_008463581.1 (PREDICTED: uncharacterized protein LOC103501690 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 9.4e-45
Identity = 94/135 (69.63%), Postives = 112/135 (82.96%), Query Frame = 0

Query: 1   MNDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSS 60
           MNDN+R+  TP +TRHRIRQLAYF MIH+  LVCR+ TR+DRRT  ILC+LL+ V+GLS 
Sbjct: 14  MNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSW 73

Query: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPV 120
            EIVDVEEMVAMFL+VL H+VKNR+IQ+KFVR GET S HFNLV+  VVRLY+++IK+PV
Sbjct: 74  IEIVDVEEMVAMFLYVLVHNVKNRIIQQKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPV 133

Query: 121 PVTNNYNDQRWKCFE 136
            VTNN  DQ WK FE
Sbjct: 134 LVTNNCTDQHWKYFE 148

BLAST of MELO3C032060.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-33
Identity = 76/134 (56.72%), Postives = 97/134 (72.39%), Query Frame = 0

Query: 2   NDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSST 61
           ND +R+T+ P +TRHRIRQLAYF MIH                         T++GL+ST
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFRMIH------------------------GTIAGLTST 88

Query: 62  EIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPVP 121
           E+VDVEEMVAMFLH+LAHDVK+RVI+R+F+R GET+SRHFN+VLL V+RL+E+L+K+P P
Sbjct: 89  EVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKKPQP 138

Query: 122 VTNNYNDQRWKCFE 136
           V N   DQRW+ FE
Sbjct: 149 VPNECTDQRWRWFE 138

BLAST of MELO3C032060.2 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 34  CRQSTRMDRRTFAILCHLLRTVSGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRF 93
           C ++ RMD+  F  LC LL+T   L  T  + +E  +A+FL ++ H+++ R +Q  F   
Sbjct: 42  CFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYS 101

Query: 94  GETVSRHFNLVLLVVVRL 112
           GET+SRHFN VL  V+ +
Sbjct: 102 GETISRHFNNVLNAVIAI 119

BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|A0A1S4DU32|A0A1S4DU32_CUCME (uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.4e-60
Identity = 122/135 (90.37%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1   MNDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSS 60
           MNDNRR+TYTP DT +RIRQLAYF MIHE DLVCRQSTRMDRRTFAILCHLLRTVS LSS
Sbjct: 28  MNDNRRITYTPFDTCNRIRQLAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRTVSVLSS 87

Query: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPV 120
            EI+DVEEMVAMFLHVLAHDVKN VIQRKFVR GETVSRHFNLVLLVVVRLYEKLIKRPV
Sbjct: 88  IEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRSGETVSRHFNLVLLVVVRLYEKLIKRPV 147

Query: 121 PVTNNYNDQRWKCFE 136
            VTNN NDQRWKCFE
Sbjct: 148 SVTNNCNDQRWKCFE 162

BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.6e-48
Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 0

Query: 26  MIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85
           MIHE DLVCRQSTRMDRRTFAILCHLLR V+GLSSTEIVDVEEMVAMFLHVLAHDVKNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 86  IQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPVPVTNNYNDQRWKCFE 136
           IQ++FVR GETVSRHFN+VLL V+RLYE+LIKRPVPVT+N NDQRWKCFE
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE 110

BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|A0A1S3BYR8|A0A1S3BYR8_CUCME (uncharacterized protein LOC103495048 OS=Cucumis melo OX=3656 GN=LOC103495048 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.0e-48
Identity = 94/134 (70.15%), Postives = 116/134 (86.57%), Query Frame = 0

Query: 2   NDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSST 61
           ND +R+T+ P + RHRIRQLAYF MIH  DLVCRQSTRMD+R FAILCHLLRT++ L+ST
Sbjct: 29  NDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTST 88

Query: 62  EIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPVP 121
           E+VDVEEMVAM+LH+LAHDVKNRVIQR+F+R GE +SRHFN+VLL V+RL+ +L+K+P P
Sbjct: 89  EVVDVEEMVAMYLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQP 148

Query: 122 VTNNYNDQRWKCFE 136
           V N+  DQRW+ FE
Sbjct: 149 VPNDCTDQRWRWFE 162

BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|A0A1S3CL59|A0A1S3CL59_CUCME (uncharacterized protein LOC103501690 OS=Cucumis melo OX=3656 GN=LOC103501690 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.2e-45
Identity = 94/135 (69.63%), Postives = 112/135 (82.96%), Query Frame = 0

Query: 1   MNDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSS 60
           MNDN+R+  TP +TRHRIRQLAYF MIH+  LVCR+ TR+DRRT  ILC+LL+ V+GLS 
Sbjct: 14  MNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSW 73

Query: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPV 120
            EIVDVEEMVAMFL+VL H+VKNR+IQ+KFVR GET S HFNLV+  VVRLY+++IK+PV
Sbjct: 74  IEIVDVEEMVAMFLYVLVHNVKNRIIQQKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPV 133

Query: 121 PVTNNYNDQRWKCFE 136
            VTNN  DQ WK FE
Sbjct: 134 LVTNNCTDQHWKYFE 148

BLAST of MELO3C032060.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.1e-33
Identity = 76/134 (56.72%), Postives = 97/134 (72.39%), Query Frame = 0

Query: 2   NDNRRMTYTPSDTRHRIRQLAYFHMIHELDLVCRQSTRMDRRTFAILCHLLRTVSGLSST 61
           ND +R+T+ P +TRHRIRQLAYF MIH                         T++GL+ST
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFRMIH------------------------GTIAGLTST 88

Query: 62  EIVDVEEMVAMFLHVLAHDVKNRVIQRKFVRFGETVSRHFNLVLLVVVRLYEKLIKRPVP 121
           E+VDVEEMVAMFLH+LAHDVK+RVI+R+F+R GET+SRHFN+VLL V+RL+E+L+K+P P
Sbjct: 89  EVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKKPQP 138

Query: 122 VTNNYNDQRWKCFE 136
           V N   DQRW+ FE
Sbjct: 149 VPNECTDQRWRWFE 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016899496.13.6e-6090.37PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo][more]
ADN33754.17.0e-4889.09retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008454692.19.1e-4870.15PREDICTED: uncharacterized protein LOC103495048 [Cucumis melo][more]
XP_008463581.19.4e-4569.63PREDICTED: uncharacterized protein LOC103501690 [Cucumis melo][more]
ADN34114.11.7e-3356.72retrotransposon protein [Cucumis melo subsp. melo][more]
Match NameE-valueIdentityDescription
AT5G41980.11.8e-1039.74Putative harbinger transposase-derived nuclease (InterPro:IPR006912)[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4DU32|A0A1S4DU32_CUCME2.4e-6090.37uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=... [more]
tr|E5GBB2|E5GBB2_CUCME4.6e-4889.09Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3BYR8|A0A1S3BYR8_CUCME6.0e-4870.15uncharacterized protein LOC103495048 OS=Cucumis melo OX=3656 GN=LOC103495048 PE=... [more]
tr|A0A1S3CL59|A0A1S3CL59_CUCME6.2e-4569.63uncharacterized protein LOC103501690 OS=Cucumis melo OX=3656 GN=LOC103501690 PE=... [more]
tr|E5GCB5|E5GCB5_CUCME1.1e-3356.72Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032060.2.1MELO3C032060.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 19..135
NoneNo IPR availablePANTHERPTHR22930:SF112SUBFAMILY NOT NAMEDcoord: 19..135

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None