MELO3C032059.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032059.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr06 : 16723266 .. 16724133 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGTGGAGAAACTACTTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCTGGCCATCCCCAAAATGCGGGGGCCAGCATGCAGTGGCTTTGAGTGGAACGATGAAGAGAAATATATCATTGCGAAGAAAGAATTATTTGATAATTGGGTTAGGGTAAGGAAAATAATATAAACGTCATACAATGTTCACAATGTACATTTACTTAACAATTTTTCAATCAGTACTCATACGTGATCTTTTTTTCCCCGCAGTCGCATCCTACAACGAAGGGACTCCTGAACAAACCGTTCCCGTATTTCGACAAACTTACATATGTGTTCGGTCGCGATAAGGCGATGAGTCGATTCGCTGAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATAACAGATTTGATATGGGGGATGGAAACGAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTCTCGCAGGATGATATACGTGCATCTCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAAACTTGGATGTTGAAGGCATACATCTGGCCCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCTGCACGCGTCCTTACAAATGAAAACCACATGTGCGCACGAAATTCTTCTGCATATTGCGTGAGATGCCAGAACTAACGAGTTTGGATAGAGCGCTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCTTGAGGATGAGAGGGAGGGATTTTGTAGAGTCTTCCTACAAGACATCACGAGATAG

mRNA sequence

ATGATGGTGGAGAAACTACTTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCTGGCCATCCCCAAAATGCGGGGGCCAGCATGCAGTGGCTTTGAGTGGAACGATGAAGAGAAATATATCATTGCGAAGAAAGAATTATTTGATAATTGGGTTAGGTCGCATCCTACAACGAAGGGACTCCTGAACAAACCGTTCCCGTATTTCGACAAACTTACATATGTGTTCGGTCGCGATAAGGCGATGAGTCGATTCGCTGAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATAACAGATTTGATATGGGGGATGGAAACGAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTCTCGCAGGATGATATACGTGCATCTCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAAACTTGGATGTTGAAGGCATACATCTGGCCCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCTGCACGCGTCCTTACAAATGAAAACCACATGTGCGCACGAAATTCTTCTGCATATTGCATGCCAGAACTAACGAGTTTGGATAGAGCGCTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCTTGAGGATGAGAGGGAGGGATTTTGTAGAGTCTTCCTACAAGACATCACGAGATAG

Coding sequence (CDS)

ATGATGGTGGAGAAACTACTTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCTGGCCATCCCCAAAATGCGGGGGCCAGCATGCAGTGGCTTTGAGTGGAACGATGAAGAGAAATATATCATTGCGAAGAAAGAATTATTTGATAATTGGGTTAGGTCGCATCCTACAACGAAGGGACTCCTGAACAAACCGTTCCCGTATTTCGACAAACTTACATATGTGTTCGGTCGCGATAAGGCGATGAGTCGATTCGCTGAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATAACAGATTTGATATGGGGGATGGAAACGAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTCTCGCAGGATGATATACGTGCATCTCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAAACTTGGATGTTGAAGGCATACATCTGGCCCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCTGCACGCGTCCTTACAAATGAAAACCACATGTGCGCACGAAATTCTTCTGCATATTGCATGCCAGAACTAACGAGTTTGGATAGAGCGCTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCTTGAGGATGAGAGGGAGGGATTTTGTAGAGTCTTCCTACAAGACATCACGAGATAG

Protein sequence

MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDNWVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVGSNEPGGYNRFDMGDGNEEFPPVYSQGIDLSQDDIRASRPSRASEGRTGSSGSKRKRGSQRNLDVEGIHLALDQTNEQLRQIAEWPARVLTNENHMCARNSSAYCMPELTSLDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVFLQDITR

Homology

[Close]

BLAST of MELO3C032059.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 199/256 (77.73%), Postives = 215/256 (83.98%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM EKL GCQVRATTVIDCRIKTLKRTF AI +M GPACSGF WNDEEK I+A+KELFDN
Sbjct: 368 MMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDN 427

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVGSNEP-GGYNRFDMGDGN 120
           WVRS P  KGLLN PFPY+D+LTYVFGRD+A  RFAETF DVGSNEP GGY+RFDMGDGN
Sbjct: 428 WVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGN 487

Query: 121 EEFPPVYSQGIDLSQDDIRASRPSRASEGRTXXXXXKRKRGSQRNLDVEGIHLALDQTNE 180
           E+FPPVYS+G+D+ QDD+RASRPS       XXXXX RKRGSQR+ DVE IHLALDQTNE
Sbjct: 488 EDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLALDQTNE 547

Query: 181 QLRQIAEWPARVLTNENHMCARNSSAYC-MPELTSLDRALLQRHLLSRMDDLRGFVLMLE 240
           QLRQIAEWPAR L N+NH+          MPELTSLDRALLQRHLLSRMDDLRGFVLM E
Sbjct: 548 QLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPE 607

Query: 241 DEREGFCRVFLQDITR 255
           DEREGFCRV L+DI R
Sbjct: 608 DEREGFCRVLLRDIER 623

[Close]

BLAST of MELO3C032059.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 209.5 bits (532), Expect = 1.3e-50
Identity = 110/255 (43.14%), Postives = 164/255 (64.31%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM EKL G  ++ ++ IDC +K+LK+T+ AI +MRGP+CSGF WN+E + IIA+++LFD+
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVGSNEPGGYN-RFDMGDG- 120
           W++SHP  KGLL+K FPY+D L+YVFG+D+A    +ETF +VGSN    +N    +GD  
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 NEEFPPVYSQGIDLSQDDIRASRPSRASEGRTXXXXXKRKRGSQRNLDVEGIHLALDQTN 180
           +E+ P +YSQG+ +S D++   R  +ASE R      KRKRGS+R   VE I   ++  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 181 EQLRQIAEWPARVLTNENHMCAR-NSSAYCMPELTSLDRALLQRHLLSRMDDLRGFVLML 240
           EQL+ IA+WP      E  M A+       +P+L S DRA L + L   ++ + GF+ + 
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIP 290

Query: 241 EDEREGFCRVFLQDI 253
            + +  +C + LQ+I
Sbjct: 291 TELKLEYCNILLQNI 305

[Close]

BLAST of MELO3C032059.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 200.7 bits (509), Expect = 6.1e-48
Identity = 111/258 (43.02%), Postives = 160/258 (62.02%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM  K+ G  + A+T ID RIK +KR F A+ +MRGP CSGF WNDE+K I+A+KE+FD+
Sbjct: 406 MMAFKIPGSNIHAST-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDD 465

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVGSNEPGGYNRFDMGDG-- 120
           W  SHP  KGLLNK F ++D+L+YVFG+D+A    AE+F D+GSN+P GY   D G    
Sbjct: 466 W--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGY---DAGAADA 525

Query: 121 --NEEFPPVYSQGIDLSQDDIRASRPSRASEGRTXXXXXKRKRGSQRNLDVEGIHLALDQ 180
             + +FPP+YS G+++S DD+  +R +R SE R      KRKR        + +  A++ 
Sbjct: 526 MPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEY 585

Query: 181 TNEQLRQIAEWP---ARVLTNENHMCARNSSAYCMPELTSLDRALLQRHLLSRMDDLRGF 240
            NEQL +IAEWP    +  T       R+  A  +PELT +DR  L R L+  +DD++ F
Sbjct: 586 GNEQLHRIAEWPILQRQDATQTRQEIVRHLEA--IPELTLMDRCRLMRILMRNVDDMKAF 645

Query: 241 VLMLEDEREGFCRVFLQD 252
           + + +  +  +C + LQ+
Sbjct: 646 LEVPDHMKYPYCSLILQE 655

[Close]

BLAST of MELO3C032059.2 vs. NCBI nr
Match: XP_016899497.1 (PREDICTED: uncharacterized protein LOC107990554 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 1.7e-37
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM EKL GCQV ATTVID RIKTLK+TF AI +MRGPACSG  WND+EK IIA+K LFDN
Sbjct: 1   MMAEKLPGCQVHATTVIDSRIKTLKQTFQAIAEMRGPACSGLGWNDKEKCIIAEKGLFDN 60

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVG 104
           WVRS+P  K LLNK FPY+D+LTYVFGRDKA  RFAETF DVG
Sbjct: 61  WVRSYPAAKELLNKLFPYYDELTYVFGRDKATGRFAETFADVG 103

[Close]

BLAST of MELO3C032059.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 3.1e-36
Identity = 88/190 (46.32%), Postives = 119/190 (62.63%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM  K+ GC + A+T ID RIK LKR F A+ +MRGP CSGF WNDE+K I+A+KE    
Sbjct: 47  MMAFKIPGCNIHAST-IDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE---- 106

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVGSNEPGGYNRFDMGDG-- 120
              SHP  KGLLNK F ++D+L+YVFG+D+A    AE F D+GSN+P GY+ F + D   
Sbjct: 107 ---SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAF-VADAAP 166

Query: 121 NEEFPPVYSQGIDLSQDDIRASRPSRASEGRTXXXXXKRKRGSQRNLDVEGIHLALDQTN 180
           +  F P+YS  +++S DD+  +R +R SE R      +RK         + +  A+   N
Sbjct: 167 DTNFSPMYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGN 226

Query: 181 EQLRQIAEWP 189
           EQL +IAEWP
Sbjct: 227 EQLHRIAEWP 227

[Close]

BLAST of MELO3C032059.2 vs. TAIR10
Match: AT4G02210.1 (unknown protein)

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 27/102 (26.47%), Postives = 47/102 (46.08%), Query Frame = 0


Query: 16  VIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDNWVRSHPTTKGLLNKP 75
           V+  R KTL+  F ++  +      GF W+D  + ++A   ++D +++ HP ++    K 
Sbjct: 65  VLKNRHKTLRNLFKSVNNLL--IEDGFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKS 124

Query: 76  FPYFDKLTYVFGRDKAMSRFAETFVDVGSN-----EPGGYNR 113
            P +  L  V+  D      AE  +  G +     E  GYNR
Sbjct: 125 IPCYKDLCLVYS-DGMSEHKAEESISEGESKTLIQEDDGYNR 163

[Close]

BLAST of MELO3C032059.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.1e-103
Identity = 199/256 (77.73%), Postives = 215/256 (83.98%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM EKL GCQVRATTVIDCRIKTLKRTF AI +M GPACSGF WNDEEK I+A+KELFDN
Sbjct: 368 MMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDN 427

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVGSNEP-GGYNRFDMGDGN 120
           WVRS P  KGLLN PFPY+D+LTYVFGRD+A  RFAETF DVGSNEP GGY+RFDMGDGN
Sbjct: 428 WVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGN 487

Query: 121 EEFPPVYSQGIDLSQDDIRASRPSRASEGRTXXXXXKRKRGSQRNLDVEGIHLALDQTNE 180
           E+FPPVYS+G+D+ QDD+RASRPS       XXXXX RKRGSQR+ DVE IHLALDQTNE
Sbjct: 488 EDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLALDQTNE 547

Query: 181 QLRQIAEWPARVLTNENHMCARNSSAYC-MPELTSLDRALLQRHLLSRMDDLRGFVLMLE 240
           QLRQIAEWPAR L N+NH+          MPELTSLDRALLQRHLLSRMDDLRGFVLM E
Sbjct: 548 QLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPE 607

Query: 241 DEREGFCRVFLQDITR 255
           DEREGFCRV L+DI R
Sbjct: 608 DEREGFCRVLLRDIER 623

[Close]

BLAST of MELO3C032059.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.6e-51
Identity = 110/255 (43.14%), Postives = 164/255 (64.31%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM EKL G  ++ ++ IDC +K+LK+T+ AI +MRGP+CSGF WN+E + IIA+++LFD+
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVGSNEPGGYN-RFDMGDG- 120
           W++SHP  KGLL+K FPY+D L+YVFG+D+A    +ETF +VGSN    +N    +GD  
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 NEEFPPVYSQGIDLSQDDIRASRPSRASEGRTXXXXXKRKRGSQRNLDVEGIHLALDQTN 180
           +E+ P +YSQG+ +S D++   R  +ASE R      KRKRGS+R   VE I   ++  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 181 EQLRQIAEWPARVLTNENHMCAR-NSSAYCMPELTSLDRALLQRHLLSRMDDLRGFVLML 240
           EQL+ IA+WP      E  M A+       +P+L S DRA L + L   ++ + GF+ + 
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIP 290

Query: 241 EDEREGFCRVFLQDI 253
            + +  +C + LQ+I
Sbjct: 291 TELKLEYCNILLQNI 305

[Close]

BLAST of MELO3C032059.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.0e-48
Identity = 111/258 (43.02%), Postives = 160/258 (62.02%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM  K+ G  + A+T ID RIK +KR F A+ +MRGP CSGF WNDE+K I+A+KE+FD+
Sbjct: 406 MMAFKIPGSNIHAST-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDD 465

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVGSNEPGGYNRFDMGDG-- 120
           W  SHP  KGLLNK F ++D+L+YVFG+D+A    AE+F D+GSN+P GY   D G    
Sbjct: 466 W--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGY---DAGAADA 525

Query: 121 --NEEFPPVYSQGIDLSQDDIRASRPSRASEGRTXXXXXKRKRGSQRNLDVEGIHLALDQ 180
             + +FPP+YS G+++S DD+  +R +R SE R      KRKR        + +  A++ 
Sbjct: 526 MPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEY 585

Query: 181 TNEQLRQIAEWP---ARVLTNENHMCARNSSAYCMPELTSLDRALLQRHLLSRMDDLRGF 240
            NEQL +IAEWP    +  T       R+  A  +PELT +DR  L R L+  +DD++ F
Sbjct: 586 GNEQLHRIAEWPILQRQDATQTRQEIVRHLEA--IPELTLMDRCRLMRILMRNVDDMKAF 645

Query: 241 VLMLEDEREGFCRVFLQD 252
           + + +  +  +C + LQ+
Sbjct: 646 LEVPDHMKYPYCSLILQE 655

[Close]

BLAST of MELO3C032059.2 vs. TrEMBL
Match: tr|A0A1S4DU21|A0A1S4DU21_CUCME (uncharacterized protein LOC107990554 OS=Cucumis melo OX=3656 GN=LOC107990554 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM EKL GCQV ATTVID RIKTLK+TF AI +MRGPACSG  WND+EK IIA+K LFDN
Sbjct: 1   MMAEKLPGCQVHATTVIDSRIKTLKQTFQAIAEMRGPACSGLGWNDKEKCIIAEKGLFDN 60

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVG 104
           WVRS+P  K LLNK FPY+D+LTYVFGRDKA  RFAETF DVG
Sbjct: 61  WVRSYPAAKELLNKLFPYYDELTYVFGRDKATGRFAETFADVG 103

[Close]

BLAST of MELO3C032059.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.1e-36
Identity = 88/190 (46.32%), Postives = 119/190 (62.63%), Query Frame = 0


Query: 1   MMVEKLLGCQVRATTVIDCRIKTLKRTFLAIPKMRGPACSGFEWNDEEKYIIAKKELFDN 60
           MM  K+ GC + A+T ID RIK LKR F A+ +MRGP CSGF WNDE+K I+A+KE    
Sbjct: 47  MMAFKIPGCNIHAST-IDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE---- 106

Query: 61  WVRSHPTTKGLLNKPFPYFDKLTYVFGRDKAMSRFAETFVDVGSNEPGGYNRFDMGDG-- 120
              SHP  KGLLNK F ++D+L+YVFG+D+A    AE F D+GSN+P GY+ F + D   
Sbjct: 107 ---SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAF-VADAAP 166

Query: 121 NEEFPPVYSQGIDLSQDDIRASRPSRASEGRTXXXXXKRKRGSQRNLDVEGIHLALDQTN 180
           +  F P+YS  +++S DD+  +R +R SE R      +RK         + +  A+   N
Sbjct: 167 DTNFSPMYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGN 226

Query: 181 EQLRQIAEWP 189
           EQL +IAEWP
Sbjct: 227 EQLHRIAEWP 227

The following BLAST results are available for this feature:

BLAST of MELO3C032059.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33754.1	1.7e-103	77.73	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008441954.1	1.3e-50	43.14	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
ADN34114.1	6.1e-48	43.02	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_016899497.1	1.7e-37	76.70	PREDICTED: uncharacterized protein LOC107990554 [Cucumis melo]	[more]
XP_008459131.1	3.1e-36	46.32	PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]	[more]

BLAST of MELO3C032059.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02210.1	1.7e-04	26.47	unknown protein	[more]

BLAST of MELO3C032059.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C032059.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBB2\|E5GBB2_CUCME	1.1e-103	77.73	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	8.6e-51	43.14	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|E5GCB5\|E5GCB5_CUCME	4.0e-48	43.02	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S4DU21\|A0A1S4DU21_CUCME	1.1e-37	76.70	uncharacterized protein LOC107990554 OS=Cucumis melo OX=3656 GN=LOC107990554 PE=...	[more]
tr\|A0A1S3C8Z4\|A0A1S3C8Z4_CUCME	2.1e-36	46.32	uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032059.2.1	MELO3C032059.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..163
None	No IPR available	PANTHER	PTHR31704:SF62	SUBFAMILY NOT NAMED	coord: 2..103
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 2..103

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C032059.2	Cucumber (Gy14) v2	cgybmedB216
MELO3C032059.2	Cucumber (Gy14) v1	cgymedB003
MELO3C032059.2	Cucurbita maxima (Rimu)	cmamedB274
MELO3C032059.2	Cucurbita maxima (Rimu)	cmamedB496
MELO3C032059.2	Cucurbita moschata (Rifu)	cmomedB259
MELO3C032059.2	Cucurbita moschata (Rifu)	cmomedB261
MELO3C032059.2	Cucurbita moschata (Rifu)	cmomedB483
MELO3C032059.2	Cucurbita pepo (Zucchini)	cpemedB630
MELO3C032059.2	Cucurbita pepo (Zucchini)	cpemedB692
MELO3C032059.2	Cucurbita pepo (Zucchini)	cpemedB694
MELO3C032059.2	Wild cucumber (PI 183967)	cpimedB240
MELO3C032059.2	Cucumber (Chinese Long) v2	cumedB239
MELO3C032059.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C032059.2	Bottle gourd (USVL1VR-Ls)	lsimedB406
MELO3C032059.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C032059.2	Watermelon (Charleston Gray)	medwcgB431
MELO3C032059.2	Watermelon (97103) v1	medwmB448
MELO3C032059.2	Watermelon (97103) v1	medwmB462
MELO3C032059.2	Silver-seed gourd	carmedB0489
MELO3C032059.2	Cucumber (Chinese Long) v3	cucmedB247
MELO3C032059.2	Watermelon (97103) v2	medwmbB424
MELO3C032059.2	Watermelon (97103) v2	medwmbB437
MELO3C032059.2	Wax gourd	medwgoB540
MELO3C032059.2	Wax gourd	medwgoB546