MELO3C032057.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C032057.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTransposase
Locationchr06 : 16569686 .. 16571912 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCTCTGTACCGGTAAAGTAGATAATTTTGCTCTAGTGGGTATGAAAATATACTACCTCTTGAGCTTAGAGATGAACATTGAGGTTTGAATGTATTTTTAGAGTCACTGCTTCAAGGTTGCAATAATAAAATCATAGGATTATGTTCGCTGGCTTAAGTTCTTGATTAATGTTTATGTGTCAAAAACTCCGCAATAATAAAATCCTATGGTTATCTATTTTTTACACTAATTTTTATTATGTAATGTGATGTAATAGGGTGACTTCGTTGTAAAAACAACCTCTTACAAAATGTGAGTTTTTGTTTCCGGAATTTTAAGTCACCGTTATCTACATTGTATGTATTACCATTTAAGGAAGATTTGATGAAATTGAAAAACCCACCAACAGAATACTCATTCATCGAGTGTGAGCATTGAAACTTATTTGTCTCTTCCAGATTAAGTGGACCCTTTGAGGTAATATAATCACCAATTCCCTTCATTCGTATATGTTAGTAATTATGCTAAAATGTAGTTTATGTGTGAAGATGGTTAGCAACAAGGGTCCTAAGCGGAGAAAGAACAACAAACACAACCATCGAATGTCGCATAAAGGTTATGCAAACCTCGTTGAAAAGATGCTAAGCCTTTGGAATAGTATATATGAGTTTTAATAATGCTACATGTAATGTGGTATAACTAACCATAATGTAATTTCCTTTGGTCAGAAAGCAAACAGATTTAGTAGTGGAGTAGTTGATCGTGCTTTAGTATGGAAGAAAGCACGAACAACCAAAGATGGGGAAATTTTGGACAAAGACACAATGGAGGTGGCTGATCGAATCGTAAGTACGTACTTTCCTTAAAGTAAGGGTGTTTTTCTTTTTGTGGTACTTACTAATACTAGAACCTTTCCATTTGATAGGACGACCTACTTGTTTTAAGTCGTGTGACTTATTCAACGGATAACGTAACTTCAAACATCCTAACACAAGCTATCGAAGGGCATGATCCACGGGGCAGGATTCCAGGGGTGGGTCTGATGTCACGTTGAGTAAATACTTCACACTGCTAGAGAGAAACAGAAGAAAGTCAGTAAAGAAGAAGATTACGTTGAAGAACGAGCGAGAACGACAACTCTTATCTTATAGTTGGGTGATTTGTACGGATGGTCTCCGTTAAAGGCCAAAATAAGAAACAACCAAAATTTGAAAGTTGTATGAAAAGTGGCCTCTTGCTTGCCTGTAAACCCTAGACTTCGTTATTGTTGAGTTTTTGGCAAAACACTAAAGGTGCTGTTGTTCCACATGGTTTATTTTGTAGAAAGGTAAGTGGCTTCAAGCAAGGAACCCACCTCCCTTATTTACAAATGTCTAAGTTAGAAAGACTTTAAACTTTAGTGTGCTAGCTCTAATTAAATTATTTTTGTACTCTCTAGCTGGAGAGTGGGAGAAAGGTGAGTATTCAAAAGCTTTGAGAGAGTGTTTTTGTAATTAGGGTAGGGAGAGAGAAACTTATTCTTTATGATTGTAACATATTTTCACATAGTGGATTTCTTTATCATTTGTGGTTTCTCACCAAGTTGGGAGTTTTCAACATAAATTCTTGTATTTCTAGTTTTTATTGATTTATTTAAGTTCTTTGTTATTTTCTGCTTATTTTTTGTAGAATTAAGATTGTTGTTGATTTTTTTAACTTAAGTATATTGTGGGAGTGTTGATTTTTTTTGTTATATCACTTGTGGTTAATATAAGTTAAGTGTTGAAGAAGGAAAATGGGCAAAGTTGATGGCCCAGAGTGTTGGCTTGGAGGCTAAAGGAAGCATAAGTTGATGTGTTGATAGGTACTTGTTAGTCAGACTTAGTGAGGTAAACTATATTTCATTCTTCATAATATGTCATTGATTCAAGATAATTGCATGCAAAATGCTATTTGTAAGTTTCTTCATTATGCGCTCAGACATGATCATTGCATGCAAAATTTTCTCAATGTCTCTATTCATCACGTACTTCTAAGTCCTTGTCGTGTACAAGTTTTTTTATTCCTTGTCAAAGTATAAGCGAAACAATATATTTATCTAGGTGATCTAGAGTCGAAAATAGAGAATTGTTATCAAAGGTTAGTTTTAAGGTTCATTAGGTGTTTAGGCAGTATAAAAGGATGAACTATTCAATGTAAATGAGTGTAAGTTTTAAATTATATCTACTTATTTACAGTAGAGAATCTGTAAAGGAGACTTAA

mRNA sequence

ATGGCATCCTCTGTACCGGGTGACTTCGTTGTAAAAACAACCTCTTACAAAATTTTATGTGTGAAGATGGTTAGCAACAAGGGTCCTAAGCGGAGAAAGAACAACAAACACAACCATCGAATGTCGCATAAAGGTTATGCAAACCTCAAAGCAAACAGATTTAGTAGTGGAGTAGTTGATCGTGCTTTAGTATGGAAGAAAGCACGAACAACCAAAGATGGGGAAATTTTGGACAAAGACACAATGGAGGTGGCTGATCGAATCGACGACCTACTTGTTTTAAGTCGTGTGACTTATTCAACGGATAACGTAACTTCAAACATCCTAACACAAGCTATCGAAGGGCATGATCCACGGGGCAGGATTCCAGGGCTGGAGAGTGGGAGAAAGTTAAGTGTTGAAGAAGGAAAATGGGCAAAGTTGATGGCCCAGAGTGTTGGCTTGGAGGCTAAAGGAAGCATAAGTGATCTAGAGTCGAAAATAGAGAATTGTTATCAAAGTAGAGAATCTGTAAAGGAGACTTAA

Coding sequence (CDS)

ATGGCATCCTCTGTACCGGGTGACTTCGTTGTAAAAACAACCTCTTACAAAATTTTATGTGTGAAGATGGTTAGCAACAAGGGTCCTAAGCGGAGAAAGAACAACAAACACAACCATCGAATGTCGCATAAAGGTTATGCAAACCTCAAAGCAAACAGATTTAGTAGTGGAGTAGTTGATCGTGCTTTAGTATGGAAGAAAGCACGAACAACCAAAGATGGGGAAATTTTGGACAAAGACACAATGGAGGTGGCTGATCGAATCGACGACCTACTTGTTTTAAGTCGTGTGACTTATTCAACGGATAACGTAACTTCAAACATCCTAACACAAGCTATCGAAGGGCATGATCCACGGGGCAGGATTCCAGGGCTGGAGAGTGGGAGAAAGTTAAGTGTTGAAGAAGGAAAATGGGCAAAGTTGATGGCCCAGAGTGTTGGCTTGGAGGCTAAAGGAAGCATAAGTGATCTAGAGTCGAAAATAGAGAATTGTTATCAAAGTAGAGAATCTGTAAAGGAGACTTAA

Protein sequence

MASSVPGDFVVKTTSYKILCVKMVSNKGPKRRKNNKHNHRMSHKGYANLKANRFSSGVVDRALVWKKARTTKDGEILDKDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIPGLESGRKLSVEEGKWAKLMAQSVGLEAKGSISDLESKIENCYQSRESVKET
BLAST of MELO3C032057.2 vs. NCBI nr
Match: XP_008466911.1 (PREDICTED: uncharacterized protein LOC103504261, partial [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 7.6e-26
Identity = 69/106 (65.09%), Postives = 84/106 (79.25%), Query Frame = 0

Query: 23  MVSNKGPKRRKNNKHNHRMSHKGYANL----KANRFSSGVVDRALVWKKARTTKDGEILD 82
           MVSNKG ++RKNNK+NHRMS KGYANL    KA+  +  ++DRALVWKKARTTKDGEI D
Sbjct: 1   MVSNKGREQRKNNKYNHRMSRKGYANLTEEMKASTSNGELIDRALVWKKARTTKDGEIPD 60

Query: 83  KDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIPG 125
            DT EVA++ID+LLV    ++S DNVT +IL+QAI G+DP GRI G
Sbjct: 61  IDTKEVANKIDNLLVSKCASHSMDNVTCDILSQAIGGNDPSGRIRG 106

BLAST of MELO3C032057.2 vs. NCBI nr
Match: PRQ17594.1 (putative Ulp1 protease family catalytic domain, putative transposase, Ptta/En/Spm, plant [Rosa chinensis])

HSP 1 Score: 68.6 bits (166), Expect = 2.5e-08
Identity = 46/122 (37.70%), Postives = 72/122 (59.02%), Query Frame = 0

Query: 8   DFVVKTTSYKILCVKMVSNKGPKRRKNNKHNHRMSHKGYANLKANRFSS----GVVDRAL 67
           DFV + T+ K L    + N+  +R K  K++HR+S KGY  L+     +     V+DRA+
Sbjct: 188 DFVKERTTEKFL---QLHNEQSERVKKRKYHHRLSRKGYIGLEEELRKTLPEGEVIDRAI 247

Query: 68  VWKKARTTKDGEILDKDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIP 126
           +WKKAR  KDG+I D++   VA +IDDLL          + +S++L+QA+E  +  GR+ 
Sbjct: 248 MWKKARQRKDGDI-DEEARGVATKIDDLLEKKSKGELEISGSSDVLSQALETPEHSGRVR 305

BLAST of MELO3C032057.2 vs. NCBI nr
Match: PRQ17143.1 (putative Ulp1 protease family catalytic domain, putative transposase, Ptta/En/Spm, plant [Rosa chinensis])

HSP 1 Score: 68.2 bits (165), Expect = 3.2e-08
Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 0

Query: 8   DFVVKTTSYKILCVKMVSNKGPKRRKNNKHNHRMSHKGYANLKANRFSS----GVVDRAL 67
           DFV + T+ K L    + N+  +R K  K++HR+S KGY  L+     +     V+DRA+
Sbjct: 188 DFVKERTTEKFL---QLHNEQSERVKKRKYHHRLSRKGYIGLEEELRKTLPEGEVIDRAI 247

Query: 68  VWKKARTTKDGEILDKDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIP 126
           +WKKAR  KDG+I D++   VA +IDDLL          +  S++L+QA+E  +  GR+ 
Sbjct: 248 MWKKARQRKDGDI-DEEARGVATKIDDLLEKKSKGELEISGNSDVLSQALETPEHSGRVR 305

BLAST of MELO3C032057.2 vs. NCBI nr
Match: PRQ38714.1 (hypothetical protein RchiOBHm_Chr4g0417051 [Rosa chinensis])

HSP 1 Score: 63.5 bits (153), Expect = 7.9e-07
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0

Query: 9   FVVKTTSYKILCVKMVSNKGPKRRKNNKHNHRMSHKGY----ANLKANRFSSGVVDRALV 68
           FV + T+ K L    + NK  +R +  K++HR+S KGY      LK       V+DRA++
Sbjct: 189 FVKERTTEKWL---ELHNKQSERVQKRKYHHRLSRKGYIGLEEELKKTLPEGEVIDRAIM 248

Query: 69  WKKARTTKDGEILDKDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIPG 126
           WKKAR  KDG+I D++   V  +IDDLL          + +S++L+QA+E  +  GR+ G
Sbjct: 249 WKKARQRKDGDI-DEEARAVVTKIDDLLEKKSKGELEISGSSDVLSQALETPEHSGRVRG 305

BLAST of MELO3C032057.2 vs. NCBI nr
Match: XP_017240604.1 (PREDICTED: uncharacterized protein LOC108213333 [Daucus carota subsp. sativus])

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 0

Query: 9   FVVKTTSYKILCVKMVSNKGPKRRKNNKHNHRMSHKGYANL-----KANRFSSG-VVDRA 68
           FV + TS K + ++   +K  ++R   K+ HR+S KGY  L     KA R   G   DRA
Sbjct: 188 FVAERTSDKWMKLRAKQSKIVEQR---KYPHRLSRKGYIGLEEEEVKAGRLKPGEKPDRA 247

Query: 69  LVWKKARTTKDGEILDKDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRI 128
           ++WKKAR T +G ++D    +V  +ID+LL + +      + + ++LT+A+E  +  GR+
Sbjct: 248 ILWKKARQTAEGMVVDTGLSDVLKKIDNLLEMKKKGEFQPSGSDDVLTRALETPEHSGRV 307

BLAST of MELO3C032057.2 vs. TrEMBL
Match: tr|A0A1S3CSG6|A0A1S3CSG6_CUCME (uncharacterized protein LOC103504261 OS=Cucumis melo OX=3656 GN=LOC103504261 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.0e-26
Identity = 69/106 (65.09%), Postives = 84/106 (79.25%), Query Frame = 0

Query: 23  MVSNKGPKRRKNNKHNHRMSHKGYANL----KANRFSSGVVDRALVWKKARTTKDGEILD 82
           MVSNKG ++RKNNK+NHRMS KGYANL    KA+  +  ++DRALVWKKARTTKDGEI D
Sbjct: 1   MVSNKGREQRKNNKYNHRMSRKGYANLTEEMKASTSNGELIDRALVWKKARTTKDGEIPD 60

Query: 83  KDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIPG 125
            DT EVA++ID+LLV    ++S DNVT +IL+QAI G+DP GRI G
Sbjct: 61  IDTKEVANKIDNLLVSKCASHSMDNVTCDILSQAIGGNDPSGRIRG 106

BLAST of MELO3C032057.2 vs. TrEMBL
Match: tr|A0A2P6P6Q9|A0A2P6P6Q9_ROSCH (Putative Ulp1 protease family catalytic domain, putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0196691 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08
Identity = 46/122 (37.70%), Postives = 72/122 (59.02%), Query Frame = 0

Query: 8   DFVVKTTSYKILCVKMVSNKGPKRRKNNKHNHRMSHKGYANLKANRFSS----GVVDRAL 67
           DFV + T+ K L    + N+  +R K  K++HR+S KGY  L+     +     V+DRA+
Sbjct: 188 DFVKERTTEKFL---QLHNEQSERVKKRKYHHRLSRKGYIGLEEELRKTLPEGEVIDRAI 247

Query: 68  VWKKARTTKDGEILDKDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIP 126
           +WKKAR  KDG+I D++   VA +IDDLL          + +S++L+QA+E  +  GR+ 
Sbjct: 248 MWKKARQRKDGDI-DEEARGVATKIDDLLEKKSKGELEISGSSDVLSQALETPEHSGRVR 305

BLAST of MELO3C032057.2 vs. TrEMBL
Match: tr|A0A2P6P5D9|A0A2P6P5D9_ROSCH (Putative Ulp1 protease family catalytic domain, putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0191841 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-08
Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 0

Query: 8   DFVVKTTSYKILCVKMVSNKGPKRRKNNKHNHRMSHKGYANLKANRFSS----GVVDRAL 67
           DFV + T+ K L    + N+  +R K  K++HR+S KGY  L+     +     V+DRA+
Sbjct: 188 DFVKERTTEKFL---QLHNEQSERVKKRKYHHRLSRKGYIGLEEELRKTLPEGEVIDRAI 247

Query: 68  VWKKARTTKDGEILDKDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIP 126
           +WKKAR  KDG+I D++   VA +IDDLL          +  S++L+QA+E  +  GR+ 
Sbjct: 248 MWKKARQRKDGDI-DEEARGVATKIDDLLEKKSKGELEISGNSDVLSQALETPEHSGRVR 305

BLAST of MELO3C032057.2 vs. TrEMBL
Match: tr|A0A2P6QX33|A0A2P6QX33_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0417051 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.2e-07
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0

Query: 9   FVVKTTSYKILCVKMVSNKGPKRRKNNKHNHRMSHKGY----ANLKANRFSSGVVDRALV 68
           FV + T+ K L    + NK  +R +  K++HR+S KGY      LK       V+DRA++
Sbjct: 189 FVKERTTEKWL---ELHNKQSERVQKRKYHHRLSRKGYIGLEEELKKTLPEGEVIDRAIM 248

Query: 69  WKKARTTKDGEILDKDTMEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIPG 126
           WKKAR  KDG+I D++   V  +IDDLL          + +S++L+QA+E  +  GR+ G
Sbjct: 249 WKKARQRKDGDI-DEEARAVVTKIDDLLEKKSKGELEISGSSDVLSQALETPEHSGRVRG 305

BLAST of MELO3C032057.2 vs. TrEMBL
Match: tr|A0A2P6RYL9|A0A2P6RYL9_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0145261 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.9e-07
Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 0

Query: 26  NKGPKRRKNNKHNHRMSHKGYANLKANRFSS----GVVDRALVWKKARTTKDGEILDKDT 85
           N   KR K  K++HR+S KGY  L+     S     V+DRA++WKKAR  K+GEI ++ T
Sbjct: 105 NDQSKRVKKRKYHHRLSRKGYIGLEEELKHSWPEGDVIDRAILWKKARVLKNGEISEEVT 164

Query: 86  MEVADRIDDLLVLSRVTYSTDNVTSNILTQAIEGHDPRGRIPGL 126
             +A +ID+L+   R      + +S++L+QA+E  +  GR+ G+
Sbjct: 165 -PIATKIDELMEKKRKGELEISGSSDVLSQALETPEHSGRVRGV 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008466911.17.6e-2665.09PREDICTED: uncharacterized protein LOC103504261, partial [Cucumis melo][more]
PRQ17594.12.5e-0837.70putative Ulp1 protease family catalytic domain, putative transposase, Ptta/En/Sp... [more]
PRQ17143.13.2e-0837.70putative Ulp1 protease family catalytic domain, putative transposase, Ptta/En/Sp... [more]
PRQ38714.17.9e-0737.19hypothetical protein RchiOBHm_Chr4g0417051 [Rosa chinensis][more]
XP_017240604.11.4e-0634.40PREDICTED: uncharacterized protein LOC108213333 [Daucus carota subsp. sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3CSG6|A0A1S3CSG6_CUCME5.0e-2665.09uncharacterized protein LOC103504261 OS=Cucumis melo OX=3656 GN=LOC103504261 PE=... [more]
tr|A0A2P6P6Q9|A0A2P6P6Q9_ROSCH1.6e-0837.70Putative Ulp1 protease family catalytic domain, putative transposase, Ptta/En/Sp... [more]
tr|A0A2P6P5D9|A0A2P6P5D9_ROSCH2.1e-0837.70Putative Ulp1 protease family catalytic domain, putative transposase, Ptta/En/Sp... [more]
tr|A0A2P6QX33|A0A2P6QX33_ROSCH5.2e-0737.19Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0417051 PE=4... [more]
tr|A0A2P6RYL9|A0A2P6RYL9_ROSCH8.9e-0738.46Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004252Probable_transposase_24
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008234 cysteine-type peptidase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032057.2.1MELO3C032057.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004252Probable transposase, Ptta/En/Spm, plantPFAMPF03004Transposase_24coord: 24..128
e-value: 1.8E-6
score: 28.0

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None