MELO3C032034.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032034.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr06 : 15074209 .. 15077375 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTTTTTGTTTCTTCTCCCACTATGGGTGCATGCAATTTGGGCATCTCTTCCATATTATCTTCTCCGCCAATTCTTCTTTCAATGTTTTTCCATTCTTAGTGTGTTGTGGTTTTTTCAATTATTTTTCCTGAAGGGTTAAATACTAAAATAACTAGAGAGGATGAAGAGGCATTTGAAAAAGGGTCCTTTCCAATTCCATTGCATTGCCTCATCGGATATTGAAAAAAAGAGATCAATAGTGGAGAATTCTTTTATTCTACCTCCAACTGTTGCATTTCCAGTTAATCTCAATTATTGCGTCTCTTTGGCTTTATTGTTACAAAAGGCTTCTCAATCGTATGCCTATGGCACCAAATGTTGCTACTTGGGGTGCCTTACTTAAGGCTTGTAAGAAACACGGTGATAGTGAAATGGGAAGAAGGGTTGAGAGGAAGCTGATTGAGCTTCAGCCTGACCATGATGGTTTCCATGTGTTGTTATCTAACATATATGCTTCAAAAGGAAAATGGGATGATGTTATTGAGATTAGAGACATGATGACAAAATTAAGGGTTTTGAAAATTCCTGGTTGTAGCATGATTGAAGCAAATGGAGTTATTCATGAATTTCTAGCTAGTGATAAAACACACCCTAACATGGATGCAATTGAGGATATGTTGGTTGAAATGGCTATGAAATTGAAGTTAGAAGGTTATACACCAGATACAAATGAGGTTTTTCTTGATGTTGATGAAGAAGAGAAGGAAAGTATTCGGTTTAGACATAGTGAAAAGCTAGCCATTTCCTCCATTTTTGTAAGTGAAAGAGTTACACTTAGCCAAATTCAAAAATCGAAAAAAAGTTTTTAATAACTATTTTTCTTTGGTTTCCAGAACTTAGTGTATTTGGCTATTTTTGCTTCTGCAGTTCATAGAAAAAGATTCGAGTAGGACTGGGCAGTGATAAATGTCGGTGATCGAGTGGACAGTGCATTGAAAGACATGGCTATAGTGATGAAGCAGCTGAACCGCTCTGGTGAAGCGATTGAGGCTATCAAATCCTTTTCTTTAGATGATCTTTTCCTTTCGTAGATTAAATTTCTTTTGTGTTGGGATGGTTATCTTAGGACTTGATAGTTTATCATAGAAATTATTTGTAGTAACTTACATCCGTTGATTTGTGTAAGTTGTAAAAGTTTATAATGGTAATGTCTGCATTGTTCTTTTAATAATTGTGTTTGAAAATACAAGCTGTTACATTGGTAGTTTTCTTCGCTAGTCATTGAAGTTGTTCACAGTTTGCTCATTGATACTATGAAGTCGTTCTTTATTTTTTCACATTCAAATTTAGGTATCCTAATTGTATTTTTTTTTTTTCAAGTTGATTTTATGATTTGGGCAAATATTTCAAAGTTACTTTTTGGGCATTTTCTTGCATTGTAGATTTAGCATCTTTCTACACATGCCTATTATAGATGACTTCAAACTATCATATGTCTCACAAACTTAGAGTAGCATATTCATCTTTTCATGTTGAACGACATTCCAGAAGCGTAATTATCACTTGAGCTAATTTTCTCAGGTAATTTATTCTACTGCTGCTTCAGATTTTCTTTATTTTTTCTTTCCAAAGTTTCTTTTATTTTTATTTAATGAATATTTGTACCTATTAGCTTCTACATAAATTTTCTAGGTGAAATTTAAACTGAATATTTGTTCATTGTTTTAAACTTTTATTCGTCATGTGATGGTGGGAAATGATATTCTTTAAGTCATTCTTGAATATCACCATACACAGTCATGCATGGTATTCCTATGCCCACAAGAAATTGTAGAGCACCTTTGAGTATAGCTTATTGGCTGAGACATAGTTTTGGCCAAGAGGTTAAGTGATTAGAAAACCCATTTTCGATATAGTTGAACTAAAATATTTGTAACTGGATTTAAGAGTTACATTTTCAACTTTTTTGATTAAAAAACCTATTTTGAATTTTGGTTTCGAGATACTTGATTATTGTTTATGATATAATTAGCAATGTGTACACCCTCTTCTCTGGTTCTAGAATTTGTATGCTGCCTTGTGATTTTTGGATGTAGAAAACTTCAGAATCTTTTCTTTGCAAATCTAGCATTTGTTTTGTTGTTTTTGTCCTATTAAGAGATCATTCCTTGGCCACTTTTTTCTAACATTCCAAATACTAGATCATGTTAAGTTCATTAAATAATTATTGGCAGATAAACTTTTGGTCCCATTTGATAAAGGTTTAGTTGTTAGTTTTCTACTCTTGAAATTTATGCTCATTTCCTCCCAGAATATCCATACTATGATTTTCACATATAGTTTGTCAGTCGAACTGTATAGAGTATATATAAGGGATCTGTAGTTTATTTAGATTTGTGAAGTTCAGTATAAAACCATGCTCACTGAGTGTTCTTCGAAGATGTATTTTTTTTTTTGTTATGACATCAATTTGGACAATTTGGAGAGAGTTTCCTTTGTGTTGTGGCTTGACTGGTAGATGATTCATTTGTGTATTGTAAAATATTAATAAAGTTGATTCTGAAAGAAAGGTATGCCTTTTTCTTTTTTTTCTGTATTTTAGAATATTAACTTGCATTTCTTGGATTTGGGTTCAGTATGCTTCTATTTCTTAGTAAGCTTGGAACGTATACATATCTTTCTTACTAGCTTCCGATAATAGTGGTTGCACTTTCAATTTCTTGCTACATGTTGAATCATCATCAAATGTAAAGGTTTAAGTTATTAAGGTCATTCAATATTTTCAATATATATCACGATATATTTGATAGAAGCTTATATTACAGTCCTACTACTTAAAGTTGTTATTTTTCTGGTTATTTTTGTTGCAAATATAGGAACTGCATACTCATTCTTATCATCCTTGTTATTAATTTATGATTAATTAGGACGACTAATGACTGTTGATTTGTGGATATTTGTGCCATTTCATTTATCTTTATACTAACCTCTGGTTGTTATTGGTATTTTTGAATCAGAAATGTTTAACTATTGGTTTGTCCATTGTGGTAGTTTGCGCTATTTCCTGTCTTTTTAACAAGTCTTATTCTGAGCTACAATCATCATTTTCTTTTCTTACTAGGTTTTGCATGAATCCATTGGAACAGTGAAGCCATATTTGCGGCAATTGATTGATTTATAG

mRNA sequence

TTTTTTTTTTTTTGTTTCTTCTCCCACTATGGGTGCATGCAATTTGGGCATCTCTTCCATATTATCTTCTCCGCCAATTCTTCTTTCAATGTTTTTCCATTCTTAGTGTGTTGTGGTTTTTTCAATTATTTTTCCTGAAGGGTTAAATACTAAAATAACTAGAGAGGATGAAGAGGCATTTGAAAAAGGGTCCTTTCCAATTCCATTGCATTGCCTCATCGGATATTGAAAAAAAGAGATCAATAGTGGAGAATTCTTTTATTCTACCTCCAACTGTTGCATTTCCAGTTAATCTCAATTATTGCGTCTCTTTGGCTTTATTGTTACAAAAGGCTTCTCAATCGTATGCCTATGGCACCAAATGTTGCTACTTGGGGTGCCTTACTTAAGGCTTGTAAGAAACACGGTGATAGTGAAATGGGAAGAAGGGTTGAGAGGAAGCTGATTGAGCTTCAGCCTGACCATGATGGTTTCCATGTGTTGTTATCTAACATATATGCTTCAAAAGGAAAATGGGATGATGTTATTGAGATTAGAGACATGATGACAAAATTAAGGGTTTTGAAAATTCCTGGTTGTAGCATGATTGAAGCAAATGGAGTTATTCATGAATTTCTAGCTAGTGATAAAACACACCCTAACATGGATGCAATTGAGGATATGTTGGTTGAAATGGCTATGAAATTGAAGTTAGAAGGTTATACACCAGATACAAATGAGGTTTTTCTTGATGTTGATGAAGAAGAGAAGGAAAGTATTCGGTTTAGACATAGTGAAAAGCTAGCCATTTCCTCCATTTTTGTTTTGCATGAATCCATTGGAACAGTGAAGCCATATTTGCGGCAATTGATTGATTTATAG

Coding sequence (CDS)

ATGCCTATGGCACCAAATGTTGCTACTTGGGGTGCCTTACTTAAGGCTTGTAAGAAACACGGTGATAGTGAAATGGGAAGAAGGGTTGAGAGGAAGCTGATTGAGCTTCAGCCTGACCATGATGGTTTCCATGTGTTGTTATCTAACATATATGCTTCAAAAGGAAAATGGGATGATGTTATTGAGATTAGAGACATGATGACAAAATTAAGGGTTTTGAAAATTCCTGGTTGTAGCATGATTGAAGCAAATGGAGTTATTCATGAATTTCTAGCTAGTGATAAAACACACCCTAACATGGATGCAATTGAGGATATGTTGGTTGAAATGGCTATGAAATTGAAGTTAGAAGGTTATACACCAGATACAAATGAGGTTTTTCTTGATGTTGATGAAGAAGAGAAGGAAAGTATTCGGTTTAGACATAGTGAAAAGCTAGCCATTTCCTCCATTTTTGTTTTGCATGAATCCATTGGAACAGTGAAGCCATATTTGCGGCAATTGATTGATTTATAG

Protein sequence

MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDVIEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYTPDTNEVFLDVDEEEKESIRFRHSEKLAISSIFVLHESIGTVKPYLRQLIDL
Homology
[Close]
BLAST of MELO3C032034.2 vs. NCBI nr
Match: XP_016902057.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like isoform X1 [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 7.4e-82
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV
Sbjct: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT
Sbjct: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFV 154
           PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFV
Sbjct: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFV 153

[Close]
BLAST of MELO3C032034.2 vs. NCBI nr
Match: XP_008457061.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like isoform X2 [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 1.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV
Sbjct: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT
Sbjct: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFVLHE 157
           PDTNEVFLDVDEEEKESIRFRHSEKLAISSIF + +
Sbjct: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFFIEK 156

[Close]
BLAST of MELO3C032034.2 vs. NCBI nr
Match: XP_016902068.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 5.3e-72
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPM P+VATWGALL ACKKHGDSEMG+RV RKLIELQPDHDGFHVLLSNIYASKGKWDDV
Sbjct: 603 MPMTPDVATWGALLGACKKHGDSEMGKRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDV 662

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           +EIR MMTK RVLKIPGCSMIEANGVIHEFLA DKTHPNMDAIEDMLVEMAMKLKLEGYT
Sbjct: 663 LEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPNMDAIEDMLVEMAMKLKLEGYT 722

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           PDTNEV LDVDEEEKES  FRHSEKLAI+
Sbjct: 723 PDTNEVLLDVDEEEKESTLFRHSEKLAIA 751

[Close]
BLAST of MELO3C032034.2 vs. NCBI nr
Match: KGN57449.1 (hypothetical protein Csa_3G187240 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 4.5e-71
Identity = 135/149 (90.60%), Postives = 139/149 (93.29%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPM P+VATWGALL ACKKHGDSEMGRRV RKLIELQPDHDGFHVLLSNIYASKGKWDDV
Sbjct: 429 MPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDV 488

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           +EIR MMTK RVLKIPGCSMIEANGVIHEFLA DKTHP+MDAIEDMLVEMAMKLKLEGYT
Sbjct: 489 LEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYT 548

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           PD NEV LDVDEEEKES  FRHSEKLAI+
Sbjct: 549 PDINEVLLDVDEEEKESTLFRHSEKLAIA 577

[Close]
BLAST of MELO3C032034.2 vs. NCBI nr
Match: XP_011651205.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like isoform X1 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 4.5e-71
Identity = 135/149 (90.60%), Postives = 139/149 (93.29%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPM P+VATWGALL ACKKHGDSEMGRRV RKLIELQPDHDGFHVLLSNIYASKGKWDDV
Sbjct: 603 MPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDV 662

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           +EIR MMTK RVLKIPGCSMIEANGVIHEFLA DKTHP+MDAIEDMLVEMAMKLKLEGYT
Sbjct: 663 LEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYT 722

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           PD NEV LDVDEEEKES  FRHSEKLAI+
Sbjct: 723 PDINEVLLDVDEEEKESTLFRHSEKLAIA 751

[Close]
BLAST of MELO3C032034.2 vs. TAIR10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-37
Identity = 71/152 (46.71%), Postives = 101/152 (66.45%), Query Frame = 0 

Query: 2   PMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDVI 61
           PM PNV  W  LL AC  HGDS++      ++++L+P+H G +VLLSN+YAS+ +W DV 
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQ 446

Query: 62  EIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYTP 121
           +IR  M +  V K+PG S++E    +HEFL  DK+HP  DAI   L EM  +L+ EGY P
Sbjct: 447 KIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVP 506

Query: 122 DTNEVFLDVDEEEKESIRFRHSEKLAISSIFV 154
             + V++DV+EEEKE+    HSEK+AI+ + +
Sbjct: 507 QISNVYVDVEEEEKENAVVYHSEKIAIAFMLI 538

[Close]
BLAST of MELO3C032034.2 vs. TAIR10
Match: AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 5.2e-37
Identity = 72/148 (48.65%), Postives = 98/148 (66.22%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MP+A NV  WG+L+ AC+ HG+ E+G+   ++++EL+PDHDG  VL+SNIYA + +W+DV
Sbjct: 507 MPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDV 566

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
             IR +M +  V K  G S I+ NG  HEFL  DK H   + I   L E+  KLKL GY 
Sbjct: 567 RNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYV 626

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAI 149
           PD   V +DV+EEEK+ +   HSEKLA+
Sbjct: 627 PDCGSVLVDVEEEEKKDLVLWHSEKLAL 654

[Close]
BLAST of MELO3C032034.2 vs. TAIR10
Match: AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 149.1 bits (375), Expect = 2.6e-36
Identity = 72/149 (48.32%), Postives = 98/149 (65.77%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPM PN   WGALL  C+   D+++   V ++LI L+P + G +V LSNIY+  G+WD+ 
Sbjct: 476 MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEA 535

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
            E+RDMM K  + KIPG S IE  G +HEFLA DK+HP  D I   L ++  +++L G+ 
Sbjct: 536 AEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFV 595

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           P T  VF DV+EEEKE +   HSEKLA++
Sbjct: 596 PTTEFVFFDVEEEEKERVLGYHSEKLAVA 624

[Close]
BLAST of MELO3C032034.2 vs. TAIR10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-35
Identity = 68/147 (46.26%), Postives = 100/147 (68.03%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MP+ P+   W ALL AC+  G+ EMG+RV   L+++ P   G +V LSN+YAS+G W +V
Sbjct: 437 MPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 496

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
            E+R  M +  + K PGCS+I+ +GV+HEF+  D +HP    I  MLVE++ KL+L GY 
Sbjct: 497 SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYR 556

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLA 148
           P T +V L+++EE+KE++   HSEK+A
Sbjct: 557 PITTQVLLNLEEEDKENVLHYHSEKIA 583

[Close]
BLAST of MELO3C032034.2 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 3.7e-35
Identity = 69/149 (46.31%), Postives = 98/149 (65.77%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           M M P+   W +LLKACK HG+ E+G      LI+++P++ G +VLLSNIYAS G+W++V
Sbjct: 532 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 591

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
            + R ++    + K+PGCS IE + V+HEF+  DK HP    I  ML EM + L+  G+ 
Sbjct: 592 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 651

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           PDT+EV  +++EE KE     HSEKLAI+
Sbjct: 652 PDTSEVLQEMEEEWKEGALRHHSEKLAIA 680

[Close]
BLAST of MELO3C032034.2 vs. Swiss-Prot
Match: sp|A8MQA3|PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 4.2e-36
Identity = 71/152 (46.71%), Postives = 101/152 (66.45%), Query Frame = 0 

Query: 2   PMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDVI 61
           PM PNV  W  LL AC  HGDS++      ++++L+P+H G +VLLSN+YAS+ +W DV 
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQ 446

Query: 62  EIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYTP 121
           +IR  M +  V K+PG S++E    +HEFL  DK+HP  DAI   L EM  +L+ EGY P
Sbjct: 447 KIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVP 506

Query: 122 DTNEVFLDVDEEEKESIRFRHSEKLAISSIFV 154
             + V++DV+EEEKE+    HSEK+AI+ + +
Sbjct: 507 QISNVYVDVEEEEKENAVVYHSEKIAIAFMLI 538

[Close]
BLAST of MELO3C032034.2 vs. Swiss-Prot
Match: sp|O23337|PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.3e-36
Identity = 72/148 (48.65%), Postives = 98/148 (66.22%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MP+A NV  WG+L+ AC+ HG+ E+G+   ++++EL+PDHDG  VL+SNIYA + +W+DV
Sbjct: 507 MPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDV 566

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
             IR +M +  V K  G S I+ NG  HEFL  DK H   + I   L E+  KLKL GY 
Sbjct: 567 RNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYV 626

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAI 149
           PD   V +DV+EEEK+ +   HSEKLA+
Sbjct: 627 PDCGSVLVDVEEEEKKDLVLWHSEKLAL 654

[Close]
BLAST of MELO3C032034.2 vs. Swiss-Prot
Match: sp|Q9SR82|PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.6e-35
Identity = 72/149 (48.32%), Postives = 98/149 (65.77%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPM PN   WGALL  C+   D+++   V ++LI L+P + G +V LSNIY+  G+WD+ 
Sbjct: 476 MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEA 535

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
            E+RDMM K  + KIPG S IE  G +HEFLA DK+HP  D I   L ++  +++L G+ 
Sbjct: 536 AEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFV 595

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           P T  VF DV+EEEKE +   HSEKLA++
Sbjct: 596 PTTEFVFFDVEEEEKERVLGYHSEKLAVA 624

[Close]
BLAST of MELO3C032034.2 vs. Swiss-Prot
Match: sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.0e-34
Identity = 68/147 (46.26%), Postives = 100/147 (68.03%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MP+ P+   W ALL AC+  G+ EMG+RV   L+++ P   G +V LSN+YAS+G W +V
Sbjct: 437 MPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 496

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
            E+R  M +  + K PGCS+I+ +GV+HEF+  D +HP    I  MLVE++ KL+L GY 
Sbjct: 497 SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYR 556

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLA 148
           P T +V L+++EE+KE++   HSEK+A
Sbjct: 557 PITTQVLLNLEEEDKENVLHYHSEKIA 583

[Close]
BLAST of MELO3C032034.2 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.7e-34
Identity = 69/149 (46.31%), Postives = 98/149 (65.77%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           M M P+   W +LLKACK HG+ E+G      LI+++P++ G +VLLSNIYAS G+W++V
Sbjct: 532 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 591

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
            + R ++    + K+PGCS IE + V+HEF+  DK HP    I  ML EM + L+  G+ 
Sbjct: 592 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 651

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           PDT+EV  +++EE KE     HSEKLAI+
Sbjct: 652 PDTSEVLQEMEEEWKEGALRHHSEKLAIA 680

[Close]
BLAST of MELO3C032034.2 vs. TrEMBL
Match: tr|A0A1S4E1F6|A0A1S4E1F6_CUCME (pentatricopeptide repeat-containing protein At4g21065-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990284 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 4.9e-82
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV
Sbjct: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT
Sbjct: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFV 154
           PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFV
Sbjct: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFV 153

[Close]
BLAST of MELO3C032034.2 vs. TrEMBL
Match: tr|A0A1S3C4Q7|A0A1S3C4Q7_CUCME (pentatricopeptide repeat-containing protein At4g21065-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990284 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 8.3e-82
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV
Sbjct: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT
Sbjct: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFVLHE 157
           PDTNEVFLDVDEEEKESIRFRHSEKLAISSIF + +
Sbjct: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAISSIFFIEK 156

[Close]
BLAST of MELO3C032034.2 vs. TrEMBL
Match: tr|A0A1S4E1G8|A0A1S4E1G8_CUCME (pentatricopeptide repeat-containing protein At3g62890-like OS=Cucumis melo OX=3656 GN=LOC103496856 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.5e-72
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPM P+VATWGALL ACKKHGDSEMG+RV RKLIELQPDHDGFHVLLSNIYASKGKWDDV
Sbjct: 603 MPMTPDVATWGALLGACKKHGDSEMGKRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDV 662

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           +EIR MMTK RVLKIPGCSMIEANGVIHEFLA DKTHPNMDAIEDMLVEMAMKLKLEGYT
Sbjct: 663 LEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPNMDAIEDMLVEMAMKLKLEGYT 722

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           PDTNEV LDVDEEEKES  FRHSEKLAI+
Sbjct: 723 PDTNEVLLDVDEEEKESTLFRHSEKLAIA 751

[Close]
BLAST of MELO3C032034.2 vs. TrEMBL
Match: tr|A0A0A0L8Y7|A0A0A0L8Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G187240 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 3.0e-71
Identity = 135/149 (90.60%), Postives = 139/149 (93.29%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPM P+VATWGALL ACKKHGDSEMGRRV RKLIELQPDHDGFHVLLSNIYASKGKWDDV
Sbjct: 429 MPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDV 488

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           +EIR MMTK RVLKIPGCSMIEANGVIHEFLA DKTHP+MDAIEDMLVEMAMKLKLEGYT
Sbjct: 489 LEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYT 548

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           PD NEV LDVDEEEKES  FRHSEKLAI+
Sbjct: 549 PDINEVLLDVDEEEKESTLFRHSEKLAIA 577

[Close]
BLAST of MELO3C032034.2 vs. TrEMBL
Match: tr|V4SGK8|V4SGK8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10000386mg PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.2e-60
Identity = 111/149 (74.50%), Postives = 130/149 (87.25%), Query Frame = 0 

Query: 1   MPMAPNVATWGALLKACKKHGDSEMGRRVERKLIELQPDHDGFHVLLSNIYASKGKWDDV 60
           MPM+P+VATWGALL ACKKHGD EMG RV RKL+ELQPDHDGFHVLLSNI+ASKG+WDDV
Sbjct: 537 MPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDV 596

Query: 61  IEIRDMMTKLRVLKIPGCSMIEANGVIHEFLASDKTHPNMDAIEDMLVEMAMKLKLEGYT 120
           +E+R MM +  V+KIPGCSMIEANG+IHEFLA D+THP ++ I++ML EMA KLKLEGY 
Sbjct: 597 LEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYA 656

Query: 121 PDTNEVFLDVDEEEKESIRFRHSEKLAIS 150
           PDT EV  D+D+EEKE+  FRHSEKLAI+
Sbjct: 657 PDTLEVAFDIDQEEKETTLFRHSEKLAIA 685

The following BLAST results are available for this feature:
BLAST of MELO3C032034.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902057.17.4e-82100.00PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like isoform X1... [more]
XP_008457061.11.3e-8197.44PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like isoform X2... [more]
XP_016902068.15.3e-7291.28PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Cucumis m... [more]
KGN57449.14.5e-7190.60hypothetical protein Csa_3G187240 [Cucumis sativus][more]
XP_011651205.14.5e-7190.60PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like isoform X1... [more]
BLAST of MELO3C032034.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G21065.12.3e-3746.71Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G14820.15.2e-3748.65Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G08820.12.6e-3648.32Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G48910.11.7e-3546.26Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.13.7e-3546.31Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of MELO3C032034.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A8MQA3|PP330_ARATH4.2e-3646.71Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
sp|O23337|PP311_ARATH9.3e-3648.65Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... [more]
sp|Q9SR82|PP219_ARATH4.6e-3548.32Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... [more]
sp|Q9FI80|PP425_ARATH3.0e-3446.26Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
sp|Q9LN01|PPR21_ARATH6.7e-3446.31Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
BLAST of MELO3C032034.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E1F6|A0A1S4E1F6_CUCME4.9e-82100.00pentatricopeptide repeat-containing protein At4g21065-like isoform X1 OS=Cucumis... [more]
tr|A0A1S3C4Q7|A0A1S3C4Q7_CUCME8.3e-8297.44pentatricopeptide repeat-containing protein At4g21065-like isoform X2 OS=Cucumis... [more]
tr|A0A1S4E1G8|A0A1S4E1G8_CUCME3.5e-7291.28pentatricopeptide repeat-containing protein At3g62890-like OS=Cucumis melo OX=36... [more]
tr|A0A0A0L8Y7|A0A0A0L8Y7_CUCSA3.0e-7190.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G187240 PE=4 SV=1[more]
tr|V4SGK8|V4SGK8_9ROSI5.2e-6074.50Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10000386mg PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032034.2.1MELO3C032034.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 1..125
e-value: 1.7E-9
score: 39.5
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 76..153
e-value: 1.9E-14
score: 53.5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..123
NoneNo IPR availablePANTHERPTHR24015:SF678SUBFAMILY NOT NAMEDcoord: 1..123

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C032034.2Cucumber (Gy14) v2cgybmedB216
MELO3C032034.2Cucumber (Gy14) v1cgymedB338
MELO3C032034.2Cucurbita maxima (Rimu)cmamedB274
MELO3C032034.2Cucurbita maxima (Rimu)cmamedB496
MELO3C032034.2Cucurbita moschata (Rifu)cmomedB261
MELO3C032034.2Cucurbita moschata (Rifu)cmomedB483
MELO3C032034.2Cucurbita pepo (Zucchini)cpemedB630
MELO3C032034.2Cucurbita pepo (Zucchini)cpemedB694
MELO3C032034.2Wild cucumber (PI 183967)cpimedB240
MELO3C032034.2Cucumber (Chinese Long) v2cumedB239
MELO3C032034.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C032034.2Watermelon (Charleston Gray)medwcgB417
MELO3C032034.2Watermelon (97103) v1medwmB448
MELO3C032034.2Silver-seed gourdcarmedB0771
MELO3C032034.2Cucumber (Chinese Long) v3cucmedB247
MELO3C032034.2Watermelon (97103) v2medwmbB424