MELO3C032029.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032029.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Ulp1 protease family, carboxy-terminal domain protein
Location	chr06 : 14488089 .. 14490061 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTGTGATTACCCTTAAGGCTACGAGAATGTGTTTCTGTAGCGCCACCTACGGTTGTCAGGGGATTCCGTGGCTGAAAGTGGCCGTGACCGGAGATCCGAGAACTTGAGCCTAGGTGAGGACGTGGATATAGGATTGTGATATGGCTTCGGGCCTAGCTTAATCCATGGTTGGGTGGCTCTATGTGCACATAGGAGCGGTATGTTGTTACCGTGGTAGGTGTTAAGTATGCATGAGCTCCGTTTGACCGCGTGTTTCCTTGTGGATTGGATCACGTGTGAGCTATCCTTGGGTCGTATGCTTAGTATGCTATCATGGATGGATTGGATTGGATGGAGGTTGTTGTGGCGGGTACTAAATATGCGTGAGCTAGTTTTGGCCGCATGATTTTTAGTCATGTGCGAGCTATCTTTGACCGTATATTTAGATGTCTTATCATGGTTGGTTTGGATACAGGTTTGTTGGCCTTACTTATGGTTTATGGTAATATATGATTCTAATGTTTTAAATTAATATTTCGGTGTTGCTTTTATAACTAAACCGTTAAATGTATGTTTTATAAGTTTAAAATTAAAAAAAAAACAAAATTGCCACTCACTGAGTTTCAACTCACGTTTTCAATGTTTTCTCCCCTCCAAGTAACTGTCAAGGACCAAGGATTGGTTGTGCTTTCCTGTCAGTGAATGTAGTATCTCGTTTTGTAACATGTATATACTTTATGTATTCTATTTCATTATTGGGTGATTAGAAGAATCGGTAGTCACGATGAAAATTTGAGTCTGTAATGTCTCTTATTAGATTGTTTTTCCTTTGCAACTAATTTGTAGTTGAATATAAACTTTGTTTGGGACTCTGGATTATGTTGGATGAGTGTGTGGTAAGACACACTCGGGGATATTTTGAATTTTTGAAAAGTATAGAAGTGTGTCTTTCTTCTATTTTCCAGGTATGGTTAGTTCGAAAATTTTAAAATCAGGGGAGACTCTGCCGAAATTTTTATAGAATTTCTTGGAAAAGGCTTTACTAATCCTATTTATGAAAGGAATGAATTTAAGGAGTGAATTCACACCACGATCTAGGTTAGAGGGGAAAACTTAGAACGGGGTGTGACACCAGCTTAGAAGTTAGTCAACACCATGTGGCCAAATTTTATTTTTGAACCTAGGAATCTTCATGTAACGTTGCCAGTAGATGGAATAAATCCATATAGTGATATGAGCTGGTCATAGTACTCGAGAGATTAGAGCTCGAAACCTTTGTAGTAGATTAATGACTTCCAAACAAGATCAATTGGTTGTTGCTCCTTATAATCCTGGGTAAGTATTCCTAGATAAGTATAATTTTTATCAATTTAAACTTGCATTAGTACCAAAATACTAATTGCTTGCATATATATTTCATTTAGGGATCATTGGTCATTAGTAGTCATTAATCCATATGATGATGTGGTGTACCATCTTGACTCATTGAGAACAAGCTCCCGAGATGATATTAAATACGTAACGGATATGTAAGTTAATTATGTTTATGTTTCTTTTTTTAATCACTAAAGAAATTAGTTCATTTTGATTTATACTATACTTGGGAAATGTAGGGCCTTGACGATTTTCCAATCTCAGAAGAATTTGAACAAGACTAGAAAAACAACATTGTGGAAAGTGGTAAAGGTAGATATATTTATAAAATTATTTACAATTTAATTTAGCACATAACCTAATATGCATTGTCAATTGATTTTCTGTTATAGTGTCCTTTACAAGTAGGTATTGTTGAATGTCGATATTATGTCATGAGATACATGTACGAAATCGTGAGTAAGGACACAAACATTATTACTGATGCGGTATGTTTTTAAACTACTTACATTCTAATGTTATAAATAGTATAATATGTGACTTATTTTTTTAACAAAATGTCTACTTGACTTTTTATGTTCTACAGATTGATAGGAGAAACCCATACTCATAG

mRNA sequence

ATGGATGTTGTGATTACCCTTAAGGCTACGAGAATGGATCATTGGTCATTAGTAGTCATTAATCCATATGATGATGTGGTGTACCATCTTGACTCATTGAGAACAAGCTCCCGAGATGATATTAAATACGTAACGGATATGGCCTTGACGATTTTCCAATCTCAGAAGAATTTGAACAAGACTAGAAAAACAACATTGTGGAAAGTGGTAAAGTGTCCTTTACAAGTAGGTATTGTTGAATGTCGATATTATGTCATGAGATACATGTACGAAATCGTGAGTAAGGACACAAACATTATTACTGATGCGATTGATAGGAGAAACCCATACTCATAG

Coding sequence (CDS)

ATGGATGTTGTGATTACCCTTAAGGCTACGAGAATGGATCATTGGTCATTAGTAGTCATTAATCCATATGATGATGTGGTGTACCATCTTGACTCATTGAGAACAAGCTCCCGAGATGATATTAAATACGTAACGGATATGGCCTTGACGATTTTCCAATCTCAGAAGAATTTGAACAAGACTAGAAAAACAACATTGTGGAAAGTGGTAAAGTGTCCTTTACAAGTAGGTATTGTTGAATGTCGATATTATGTCATGAGATACATGTACGAAATCGTGAGTAAGGACACAAACATTATTACTGATGCGATTGATAGGAGAAACCCATACTCATAG

Protein sequence

MDVVITLKATRMDHWSLVVINPYDDVVYHLDSLRTSSRDDIKYVTDMALTIFQSQKNLNKTRKTTLWKVVKCPLQVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPYS

Homology

[Close]

BLAST of MELO3C032029.2 vs. NCBI nr
Match: XP_011648488.1 (PREDICTED: uncharacterized protein LOC105434490 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 3.2e-25
Identity = 54/97 (55.67%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 15  WSLVVINPYDDVVYHLDSLRTSSRDDIKYVTDMALTIFQSQKNLNKTRKTTLWKVVKCPL 74
           W+L+ IN Y++ VY++DSLRT+S+ DI+YV D A+TIF SQKN+  TRK ++W++VKCPL
Sbjct: 56  WALMAINAYNETVYNIDSLRTTSKVDIRYVIDTAITIFFSQKNIQTTRKQSIWEIVKCPL 115

Query: 75  QVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPYS 112
            VG+VE  YYVMRYM +I++  + ++TD+ID  +PYS
Sbjct: 116 HVGVVEYGYYVMRYMRDIITNGSIVVTDSIDTSSPYS 152

[Close]

BLAST of MELO3C032029.2 vs. NCBI nr
Match: XP_022136077.1 (uncharacterized protein LOC111007859 isoform X2 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14
Identity = 39/97 (40.21%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 14  HWSLVVINPYDDVVYHLDSLRTSSRDDIKYVTDMALTIFQSQKNLNKTRKTTLWKVVKCP 73
           HW L++IN  ++ VY LDSLR   ++D + V + +L I+Q++ ++ + R  T+WK +KCP
Sbjct: 549 HWMLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCP 608

Query: 74  LQVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPY 111
            Q+G VEC YYV +Y+ EIV   +  I++  + +N Y
Sbjct: 609 CQMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAY 645

[Close]

BLAST of MELO3C032029.2 vs. NCBI nr
Match: XP_022136076.1 (uncharacterized protein LOC111007859 isoform X1 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14
Identity = 39/97 (40.21%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 14  HWSLVVINPYDDVVYHLDSLRTSSRDDIKYVTDMALTIFQSQKNLNKTRKTTLWKVVKCP 73
           HW L++IN  ++ VY LDSLR   ++D + V + +L I+Q++ ++ + R  T+WK +KCP
Sbjct: 550 HWMLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCP 609

Query: 74  LQVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPY 111
            Q+G VEC YYV +Y+ EIV   +  I++  + +N Y
Sbjct: 610 CQMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAY 646

[Close]

BLAST of MELO3C032029.2 vs. NCBI nr
Match: PRQ21563.1 (putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensis])

HSP 1 Score: 83.2 bits (204), Expect = 6.2e-13
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 0


Query: 1   MDVVITLKATRMDHWSLVVINPYDDVVYHLDSL-RTSSRDDIKYVTDMALTIFQSQKNLN 60
           +D +I       +HW L  INP+  +VY+ D L  T+    +K + ++A+ +F +QK   
Sbjct: 462 LDQLILAPYNTGNHWLLAAINPFTALVYYFDPLGNTNINPGMKNIVELAIKMFNAQKG-R 521

Query: 61  KTRKTTLWKVVKCPLQVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPYS 112
           K RK   W+VVKCP Q G VEC YYVM+YM EI+   ++ I +  + +  Y+
Sbjct: 522 KNRKKVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGKETYT 572

[Close]

BLAST of MELO3C032029.2 vs. NCBI nr
Match: PRQ44716.1 (putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensis])

HSP 1 Score: 83.2 bits (204), Expect = 6.2e-13
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 0


Query: 1   MDVVITLKATRMDHWSLVVINPYDDVVYHLDSL-RTSSRDDIKYVTDMALTIFQSQKNLN 60
           +D +I       +HW L  INP+  +VY+ D L  T+    +K + ++A+ +F +QK   
Sbjct: 351 LDQLILAPYNTGNHWLLAAINPFTALVYYFDPLGNTNINPGMKNIVELAIKMFNAQKG-R 410

Query: 61  KTRKTTLWKVVKCPLQVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPYS 112
           K RK   W+VVKCP Q G VEC YYVM+YM EI+   ++ I +  + +  Y+
Sbjct: 411 KNRKKVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGKETYT 461

[Close]

BLAST of MELO3C032029.2 vs. TrEMBL
Match: tr|A0A2P6PI11|A0A2P6PI11_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0240601 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.1e-13
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 0


Query: 1   MDVVITLKATRMDHWSLVVINPYDDVVYHLDSL-RTSSRDDIKYVTDMALTIFQSQKNLN 60
           +D +I       +HW L  INP+  +VY+ D L  T+    +K + ++A+ +F +QK   
Sbjct: 462 LDQLILAPYNTGNHWLLAAINPFTALVYYFDPLGNTNINPGMKNIVELAIKMFNAQKG-R 521

Query: 61  KTRKTTLWKVVKCPLQVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPYS 112
           K RK   W+VVKCP Q G VEC YYVM+YM EI+   ++ I +  + +  Y+
Sbjct: 522 KNRKKVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGKETYT 572

[Close]

BLAST of MELO3C032029.2 vs. TrEMBL
Match: tr|A0A2P6RE63|A0A2P6RE63_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0482291 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.1e-13
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 0


Query: 1   MDVVITLKATRMDHWSLVVINPYDDVVYHLDSL-RTSSRDDIKYVTDMALTIFQSQKNLN 60
           +D +I       +HW L  INP+  +VY+ D L  T+    +K + ++A+ +F +QK   
Sbjct: 351 LDQLILAPYNTGNHWLLAAINPFTALVYYFDPLGNTNINPGMKNIVELAIKMFNAQKG-R 410

Query: 61  KTRKTTLWKVVKCPLQVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPYS 112
           K RK   W+VVKCP Q G VEC YYVM+YM EI+   ++ I +  + +  Y+
Sbjct: 411 KNRKKVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGKETYT 461

[Close]

BLAST of MELO3C032029.2 vs. TrEMBL
Match: tr|A0A2P6S839|A0A2P6S839_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0318241 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12
Identity = 40/112 (35.71%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 1   MDVVITLKATRMDHWSLVVINPYDDVVYHLDSL-RTSSRDDIKYVTDMALTIFQSQKNLN 60
           +D +I       +HW L  INPY  ++Y+ D L   +    +K + ++++ +F +QK   
Sbjct: 108 VDQLILAPYNTGNHWLLAAINPYTALLYYFDPLSNININPGMKNIVELSIKMFNAQKG-R 167

Query: 61  KTRKTTLWKVVKCPLQVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPYS 112
           K RK   W+VVKCP Q G+VEC YYVM+YM EI+   +  I +  + +  Y+
Sbjct: 168 KNRKKVHWEVVKCPRQPGLVECGYYVMKYMKEIIGTPSRSILNMFEEKETYT 218

[Close]

BLAST of MELO3C032029.2 vs. TrEMBL
Match: tr|A0A2P6PNF0|A0A2P6PNF0_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0261571 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 17 LVVINPYDDVVYHLDSLRTSSRD-DIKYVTDMALTIFQSQKNLNKTRKTTLWKVVKCPLQ 76
          +VVINPY D+VY+LDSL     D  +K V D+AL +F +QK  N  RK  +WK+++CP Q
Sbjct: 1  MVVINPYSDMVYYLDSLNPVDIDHGLKGVIDVALRMFNAQKGRN--RKNAIWKIIQCPTQ 60

Query: 77 VGIVECRYYVMRYMYEIVSKDT 98
           G VEC YYVM++M  I+ + T
Sbjct: 61 PGKVECGYYVMKFMKAIIEEPT 80

[Close]

BLAST of MELO3C032029.2 vs. TrEMBL
Match: tr|A0A2P6QQA8|A0A2P6QQA8_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0390571 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-11
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 1   MDVVITLKATRMDHWSLVVINPYDDVVYHLDSL-RTSSRDDIKYVTDMALTIFQSQKNLN 60
           +D +I       +HW L  IN +  +VY+ D L   +    +K + ++++ +F +QK   
Sbjct: 462 LDQLILASYNTGNHWLLAAINTFTTLVYYFDPLSNININPGMKNIIELSIKMFNAQKG-R 521

Query: 61  KTRKTTLWKVVKCPLQVGIVECRYYVMRYMYEIVSKDTNIITDAIDRRNPYS 112
           K+RK   W+VVKCP Q G VEC YYVM+YM EI+   ++ I +  + +  Y+
Sbjct: 522 KSRKPVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGKETYT 572

The following BLAST results are available for this feature:

BLAST of MELO3C032029.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648488.1	3.2e-25	55.67	PREDICTED: uncharacterized protein LOC105434490 [Cucumis sativus]	[more]
XP_022136077.1	2.5e-14	40.21	uncharacterized protein LOC111007859 isoform X2 [Momordica charantia]	[more]
XP_022136076.1	2.5e-14	40.21	uncharacterized protein LOC111007859 isoform X1 [Momordica charantia]	[more]
PRQ21563.1	6.2e-13	37.50	putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensi...	[more]
PRQ44716.1	6.2e-13	37.50	putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensi...	[more]

BLAST of MELO3C032029.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C032029.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C032029.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P6PI11\|A0A2P6PI11_ROSCH	4.1e-13	37.50	Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen...	[more]
tr\|A0A2P6RE63\|A0A2P6RE63_ROSCH	4.1e-13	37.50	Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen...	[more]
tr\|A0A2P6S839\|A0A2P6S839_ROSCH	1.2e-12	35.71	Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen...	[more]
tr\|A0A2P6PNF0\|A0A2P6PNF0_ROSCH	1.5e-12	50.00	Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen...	[more]
tr\|A0A2P6QQA8\|A0A2P6QQA8_ROSCH	2.2e-11	34.82	Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008234	cysteine-type peptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR038765	Papain_like_cys_pep_sf
IPR003653	Peptidase_C48_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0008233	peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032029.2.1	MELO3C032029.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PFAM	PF02902	Peptidase_C48	coord: 13..89 e-value: 1.1E-6 score: 28.6
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PROSITE	PS50600	ULP_PROTEASE	coord: 1..92 score: 9.094
None	No IPR available	GENE3D	G3DSA:3.40.395.10		coord: 4..107 e-value: 2.0E-9 score: 39.1
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	SSF54001	Cysteine proteinases	coord: 13..95

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C032029.2	Cucurbita pepo (Zucchini)	cpemedB694
MELO3C032029.2	Wild cucumber (PI 183967)	cpimedB239
MELO3C032029.2	Cucumber (Chinese Long) v2	cumedB238
MELO3C032029.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C032029.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C032029.2	Watermelon (97103) v1	medwmB448
MELO3C032029.2	Silver-seed gourd	carmedB0185
MELO3C032029.2	Silver-seed gourd	carmedB0771
MELO3C032029.2	Cucumber (Chinese Long) v3	cucmedB246
MELO3C032029.2	Cucumber (Chinese Long) v3	cucmedB247
MELO3C032029.2	Watermelon (97103) v2	medwmbB424
MELO3C032029.2	Wax gourd	medwgoB531
MELO3C032029.2	Cucumber (Gy14) v2	cgybmedB215
MELO3C032029.2	Cucumber (Gy14) v2	cgybmedB216
MELO3C032029.2	Cucumber (Gy14) v1	cgymedB144
MELO3C032029.2	Cucumber (Gy14) v1	cgymedB338
MELO3C032029.2	Cucurbita maxima (Rimu)	cmamedB274
MELO3C032029.2	Cucurbita maxima (Rimu)	cmamedB496
MELO3C032029.2	Cucurbita moschata (Rifu)	cmomedB261
MELO3C032029.2	Cucurbita moschata (Rifu)	cmomedB483
MELO3C032029.2	Cucurbita pepo (Zucchini)	cpemedB630