MELO3C032003.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032003.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like
Location	chr06 : 12983875 .. 12985007 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACTGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAACATCGCGGGAGAGTCGTCATCTGTGGGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAAATATTTCATGTTCTTTTTTCTAACTTTATATGTTATTATCGATTTATTGAGCAGGGTCTTCTTCTCAACAAACAACTCCGACTCCTAGAAGATGTGTGCAGTCTCGACTCTTGAAGTTAGAGTGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAACCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGACGTGTGCGTGCGAAAGACATTTTCCGTCCGCTGTCTTAAGTGGGCAGACGTTGGGAGAAAATACATTGAGGTCATCAAGAGCGACCTCCAGGTAATTAAATGCACTACACATTTATATATGATTTCATTTGAAACATATCTAATTTTAACCAATCTAATGTGTTATGTTTGTAATGTGTAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAAGAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGACCGACTGTCATAGATATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGAACGTGATGACGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGTATTTGTCATGTTTAATTATGATAACAAGTTTTAATATGTATAAGAAATAAACAATATAATTGTTTTAATGCAGGAGCAATCACGGATGAACAAGGCTGCTAGACAGAAGTAGCCTTACAATCATAGTAGCAGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAAAGGGGAGTCGGTCGATCATGTAGAATTGTTTCGGGAAACACATGTTCGAGCTGGGACATTCATGCCGCAGGCCGTCGAGGATGCGCATGTAAGTTATGCCCTTATTAATTATCCACTTTCATTATATATTTTTGCGCGTTACCTAACATAGTTTTTAAAGTTGTTGCAGAATCAAATGCTGGAACTCCAATCCCAGCCTACCCCAGAGGGTAGTTAG

mRNA sequence

ATGGAGACTGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAACATCGCGGGAGAGTCGTCATCTGTGGGCGACAATACGGGGTCTTCTTCTCAACAAACAACTCCGACTCCTAGAAGATGTGTGCAGTCTCGACTCTTGAAGTTAGAGTGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAACCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGACGTGTGCGTGCGAAAGACATTTTCCGTCCGCTGTCTTAAGTGGGCAGACGTTGGGAGAAAATACATTGAGGTCATCAAGAGCGACCTCCAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAAGAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGACCGACTGTCATAGATATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGAACGTGATGACGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGAGCAATCACGGATGAACAAGGCTGCTAGACAGAAGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAAAGGGGAGTCGGTCGATCATGTAGAATTGTTTCGGGAAACACATGTTCGAGCTGGGACATTCATGCCGCAGGCCGTCGAGGATGCGCATAATCAAATGCTGGAACTCCAATCCCAGCCTACCCCAGAGGGTAGTTAG

Coding sequence (CDS)

ATGGAGACTGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAACATCGCGGGAGAGTCGTCATCTGTGGGCGACAATACGGGGTCTTCTTCTCAACAAACAACTCCGACTCCTAGAAGATGTGTGCAGTCTCGACTCTTGAAGTTAGAGTGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAACCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGACGTGTGCGTGCGAAAGACATTTTCCGTCCGCTGTCTTAAGTGGGCAGACGTTGGGAGAAAATACATTGAGGTCATCAAGAGCGACCTCCAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAAGAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGACCGACTGTCATAGATATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGAACGTGATGACGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGAGCAATCACGGATGAACAAGGCTGCTAGACAGAAGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAAAGGGGAGTCGGTCGATCATGTAGAATTGTTTCGGGAAACACATGTTCGAGCTGGGACATTCATGCCGCAGGCCGTCGAGGATGCGCATAATCAAATGCTGGAACTCCAATCCCAGCCTACCCCAGAGGGTAGTTAG

Protein sequence

METDDMFLQFEDDLDNIAGESSSVGDNTGSSSQQTTPTPRRCVQSRLLKLECHVAINGRIPMTIAPGAEKPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVLDFNDQAMKRFVEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDDWHFLCDHYISRAFQEQSRMNKAARQKSKSFLQRQYELAERKGESVDHVELFRETHVRAGTFMPQAVEDAHNQMLELQSQPTPEGS

Homology

[Close]

BLAST of MELO3C032003.2 vs. NCBI nr
Match: ADN34071.1 (CACTA en-spm transposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 433.3 bits (1113), Expect = 5.6e-118
Identity = 224/265 (84.53%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 1   METDDMFLQFEDDLDNIAGESSSVGDNTGSSSQQTTPTPRRCVQSRLLKLECHVAINGRI 60
           METDDMFLQFEDDLDNIAG SSSVGDNT SSSQQ TPTPRR  QSRLL+LE HVAING I
Sbjct: 1   METDDMFLQFEDDLDNIAGGSSSVGDNTESSSQQATPTPRRRAQSRLLELERHVAINGCI 60

Query: 61  PMTIAPGAEKPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVLD 120
           PMTIAPGAEKPISP+AV FSQAI VCVRKTF VRCLKW DVGR+YIEV+K DLQR FVLD
Sbjct: 61  PMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVLD 120

Query: 121 FNDQAMKRFVEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDDWHFLCDHY 180
           FNDQAM RFVEHQM+TTFKEF+ DCHR+FKKYSDPEEARANPPNALV RD+DWHFL DHY
Sbjct: 121 FNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRDEDWHFLYDHY 180

Query: 181 ISRAFQEQSRMNKAARQK--------SKSFLQRQYELAERKGESVDHVELFRETHVRAGT 240
           I RAFQEQS  NKAARQK        SKSFLQRQYELAERKGE VD VELFRETHVRAGT
Sbjct: 181 IRRAFQEQSWTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDCVELFRETHVRAGT 240

Query: 241 FMPQAVEDAHNQMLELQSQPTPEGS 258
           FM QA EDAHNQMLELQSQPT EGS
Sbjct: 241 FMSQAAEDAHNQMLELQSQPTLEGS 265

[Close]

BLAST of MELO3C032003.2 vs. NCBI nr
Match: XP_016901035.1 (PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 7.0e-60
Identity = 125/173 (72.25%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 1   METDDMFLQFEDDLDNIAGESSSVGDNTGSSSQ-QTTPTPRRCVQSRLLKLECHVAINGR 60
           +ETD MFL+FEDDLDN+AG SSSVGDN GSSSQ   T TPRR VQSRLL+LECHV + G 
Sbjct: 9   LETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELECHVVVYGC 68

Query: 61  IPMTIAPGAEKPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVL 120
           IPM IAPGAE PI P+A+RFSQAI VCV+KTF V  LKWAD+ R+YIEV+K +LQR FVL
Sbjct: 69  IPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKGNLQRFFVL 128

Query: 121 DFNDQAMKRFVEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDD 173
           DFNDQA+ RFVEHQMLTTFKEF  DCHR+FK      EARANPPN LV R +D
Sbjct: 129 DFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPNVLVGRHED 175

[Close]

BLAST of MELO3C032003.2 vs. NCBI nr
Match: XP_016901155.1 (PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 2.9e-37
Identity = 96/187 (51.34%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 1   METDDMFLQFEDDLDNIAGESSSVGDNTGSSSQ-QTTPTPRRCVQSRLLKLECHVAINGR 60
           +ETD MFL+F  DLDN+AG SSS+ +N+ SSSQ   T TP+R  QSRLL+LEC+V     
Sbjct: 60  LETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQSRLLELECYV----- 119

Query: 61  IPMTIAPGAEKPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVL 120
                                                     GR+YIEV+K+DLQ  FVL
Sbjct: 120 -----------------------------------------TGREYIEVVKADLQ-FFVL 179

Query: 121 DFNDQAMKRFVEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDDWHFLCDH 180
           DF+DQAM   VE+QM  TFKEF  DCH+ FKKYSDPEEARANPPN LV R++DWHFL DH
Sbjct: 180 DFSDQAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANPPNLLVGRNEDWHFLYDH 199

Query: 181 YISRAFQ 187
           Y+S AFQ
Sbjct: 240 YMSHAFQ 199

[Close]

BLAST of MELO3C032003.2 vs. NCBI nr
Match: XP_019078959.1 (PREDICTED: uncharacterized protein LOC104881002 [Vitis vinifera])

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-21
Identity = 65/206 (31.55%), Postives = 107/206 (51.94%), Query Frame = 0


Query: 60  IPMTIAPGAEKPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVL 119
           +P+TI P   K    +  + S  I + VR+   VR  KW  + R  I  +   ++  F L
Sbjct: 43  LPITIKPSNGKQTGKYCEKLSNEIGLIVRQHALVRVEKWKQMPRAEINTMLDRIKEKFAL 102

Query: 120 DFNDQAMKRFVEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDDWHFLCDH 179
           D   + +K+ +E Q+   F+ +R D H++FKK+    EA+ NP  + V   +DW +LCD 
Sbjct: 103 DLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKFPTVVEAKRNPHES-VSNQEDWDYLCDR 162

Query: 180 YISRAFQEQSRMNKAARQK--------SKSFLQRQYELAERKGESVDHVELFRETHVRA- 239
           + S  F+ +S +N   R K        S+SF+Q   +++   GE V  +ELF+  H ++ 
Sbjct: 163 FSSEEFKRRSAINSVNRSKMPFHHRGGSRSFIQHGLQVSTENGEMVGQIELFKLVHWKSQ 222

Query: 240 GTFMPQAVEDAHNQMLELQSQPTPEG 257
             ++ Q   D + +MLELQ QP  +G
Sbjct: 223 DGWINQEARDYYEKMLELQRQPIAKG 247

[Close]

BLAST of MELO3C032003.2 vs. NCBI nr
Match: XP_019080375.1 (PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera])

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19
Identity = 65/206 (31.55%), Postives = 104/206 (50.49%), Query Frame = 0


Query: 60  IPMTIAPGAEKPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVL 119
           +P+TI P   K    +  + S  I + VR+   VR  KW  + R  I  +   ++  F L
Sbjct: 30  LPITIKPSDGKQTGKYCEKLSNEIGLTVRQHAPVRVEKWKQMPRAEINTMLDRIKEKFAL 89

Query: 120 DFNDQAMKRFVEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDDWHFLCDH 179
           D   + +K+ +E Q+   F+ +R D H++FKK+    EA+ NP  + V   +DW +LCD 
Sbjct: 90  DLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKFPTVVEAKRNPHES-VSNQEDWDYLCDR 149

Query: 180 YISRAFQEQSRMNKAARQK--------SKSFLQRQYELAERKGESVDHVELFRETHVRAG 239
           + S  F+ +S +N   R K        S+SF+Q   +++   GE V  +ELF+  H ++ 
Sbjct: 150 FSSEEFKRRSAINSVNRSKMPFHHRGGSRSFIQHGLQVSTENGEMVGQIELFKLVHWKS- 209

Query: 240 TFMPQAVEDAHNQMLELQSQPTPEGS 258
               Q       +MLELQ QP  EG+
Sbjct: 210 ----QDGWINQEKMLELQRQPIAEGA 229

[Close]

BLAST of MELO3C032003.2 vs. TrEMBL
Match: tr|E5GC72|E5GC72_CUCME (CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 3.7e-118
Identity = 224/265 (84.53%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 1   METDDMFLQFEDDLDNIAGESSSVGDNTGSSSQQTTPTPRRCVQSRLLKLECHVAINGRI 60
           METDDMFLQFEDDLDNIAG SSSVGDNT SSSQQ TPTPRR  QSRLL+LE HVAING I
Sbjct: 1   METDDMFLQFEDDLDNIAGGSSSVGDNTESSSQQATPTPRRRAQSRLLELERHVAINGCI 60

Query: 61  PMTIAPGAEKPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVLD 120
           PMTIAPGAEKPISP+AV FSQAI VCVRKTF VRCLKW DVGR+YIEV+K DLQR FVLD
Sbjct: 61  PMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVLD 120

Query: 121 FNDQAMKRFVEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDDWHFLCDHY 180
           FNDQAM RFVEHQM+TTFKEF+ DCHR+FKKYSDPEEARANPPNALV RD+DWHFL DHY
Sbjct: 121 FNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRDEDWHFLYDHY 180

Query: 181 ISRAFQEQSRMNKAARQK--------SKSFLQRQYELAERKGESVDHVELFRETHVRAGT 240
           I RAFQEQS  NKAARQK        SKSFLQRQYELAERKGE VD VELFRETHVRAGT
Sbjct: 181 IRRAFQEQSWTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDCVELFRETHVRAGT 240

Query: 241 FMPQAVEDAHNQMLELQSQPTPEGS 258
           FM QA EDAHNQMLELQSQPT EGS
Sbjct: 241 FMSQAAEDAHNQMLELQSQPTLEGS 265

[Close]

BLAST of MELO3C032003.2 vs. TrEMBL
Match: tr|A0A1S4DZ93|A0A1S4DZ93_CUCME (uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.6e-60
Identity = 125/173 (72.25%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 1   METDDMFLQFEDDLDNIAGESSSVGDNTGSSSQ-QTTPTPRRCVQSRLLKLECHVAINGR 60
           +ETD MFL+FEDDLDN+AG SSSVGDN GSSSQ   T TPRR VQSRLL+LECHV + G 
Sbjct: 9   LETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELECHVVVYGC 68

Query: 61  IPMTIAPGAEKPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVL 120
           IPM IAPGAE PI P+A+RFSQAI VCV+KTF V  LKWAD+ R+YIEV+K +LQR FVL
Sbjct: 69  IPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKGNLQRFFVL 128

Query: 121 DFNDQAMKRFVEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDD 173
           DFNDQA+ RFVEHQMLTTFKEF  DCHR+FK      EARANPPN LV R +D
Sbjct: 129 DFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPNVLVGRHED 175

[Close]

BLAST of MELO3C032003.2 vs. TrEMBL
Match: tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME (LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493054 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.9e-37
Identity = 96/187 (51.34%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 1   METDDMFLQFEDDLDNIAGESSSVGDNTGSSSQ-QTTPTPRRCVQSRLLKLECHVAINGR 60
           +ETD MFL+F  DLDN+AG SSS+ +N+ SSSQ   T TP+R  QSRLL+LEC+V     
Sbjct: 60  LETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQSRLLELECYV----- 119

Query: 61  IPMTIAPGAEKPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVL 120
                                                     GR+YIEV+K+DLQ  FVL
Sbjct: 120 -----------------------------------------TGREYIEVVKADLQ-FFVL 179

Query: 121 DFNDQAMKRFVEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDDWHFLCDH 180
           DF+DQAM   VE+QM  TFKEF  DCH+ FKKYSDPEEARANPPN LV R++DWHFL DH
Sbjct: 180 DFSDQAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANPPNLLVGRNEDWHFLYDH 199

Query: 181 YISRAFQ 187
           Y+S AFQ
Sbjct: 240 YMSHAFQ 199

[Close]

BLAST of MELO3C032003.2 vs. TrEMBL
Match: tr|A0A1S4E4L2|A0A1S4E4L2_CUCME (uncharacterized protein LOC107992057 OS=Cucumis melo OX=3656 GN=LOC107992057 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13
Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 30  SSSQQTTPTPRRCVQSRLLKLECHVAINGRIPMTIAPGAEKPISPHAVRFSQAIDVCVRK 89
           ++SQ    TPRRC  SR L+L+ +VA NG+I + I PG +K ISP+ V FS  I V    
Sbjct: 289 NASQPVARTPRRCEHSRNLELDRYVAQNGKILIFIVPGQDKRISPYVVHFSNTIGVLTGD 348

Query: 90  TFSVRCLKWADVGRKYIEVIKSDLQRLF 118
           TF VR LKWAD+  +YIE+IKS LQ  F
Sbjct: 349 TFLVRFLKWADMITEYIELIKSSLQISF 376

[Close]

BLAST of MELO3C032003.2 vs. TrEMBL
Match: tr|B9F8Q4|B9F8Q4_ORYSJ (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_11060 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.6e-12
Identity = 51/190 (26.84%), Postives = 93/190 (48.95%), Query Frame = 0


Query: 70  KPISPHAVRFSQAIDVCVRKTFSVRCLKWADVGRKYIEVIKSDLQRLFVLDFNDQAMKRF 129
           +P+  +   FS  I +  R    ++C+ W ++     E + + L+  F LD N++ +K  
Sbjct: 66  RPVGENNELFSWEIGIITRYHAPIQCIGWQNMTEVDKEALHTLLKLKFDLDLNEENVKGC 125

Query: 130 VEHQMLTTFKEFRTDCHRYFKKYSDPEEARANPPNALVERDDDWHFLCDHYISRAFQEQS 189
           VE    +++K FR   + ++ K+   E AR NP  AL +R  DW +LCDH+ +  FQ++S
Sbjct: 126 VELMFSSSYKSFRHRFYEHYVKHGGGENARMNPHKALEDRLADWFWLCDHFETEEFQKRS 185

Query: 190 RMNKAARQK--------SKSFLQRQYELAERKGESVDHVELFRETHVRAGTFMPQAVEDA 249
            + K  R          +KSF+  Q+EL          + L++E +     +      + 
Sbjct: 186 TIGKDNRSNLPYMHWKGTKSFVALQHEL------GCGDITLYKECYSNDKGWASSDAREK 245

Query: 250 HNQMLELQSQ 252
           H+QM+ +Q +
Sbjct: 246 HDQMVRMQEE 249

The following BLAST results are available for this feature:

BLAST of MELO3C032003.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34071.1	5.6e-118	84.53	CACTA en-spm transposon protein [Cucumis melo subsp. melo]	[more]
XP_016901035.1	7.0e-60	72.25	PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 P...	[more]
XP_016901155.1	2.9e-37	51.34	PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochond...	[more]
XP_019078959.1	2.9e-21	31.55	PREDICTED: uncharacterized protein LOC104881002 [Vitis vinifera]	[more]
XP_019080375.1	1.2e-19	31.55	PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera]	[more]

BLAST of MELO3C032003.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C032003.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C032003.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GC72\|E5GC72_CUCME	3.7e-118	84.53	CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S4DZ93\|A0A1S4DZ93_CUCME	4.6e-60	72.25	uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=...	[more]
tr\|A0A1S4DZJ7\|A0A1S4DZJ7_CUCME	1.9e-37	51.34	LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like O...	[more]
tr\|A0A1S4E4L2\|A0A1S4E4L2_CUCME	1.5e-13	52.27	uncharacterized protein LOC107992057 OS=Cucumis melo OX=3656 GN=LOC107992057 PE=...	[more]
tr\|B9F8Q4\|B9F8Q4_ORYSJ	1.6e-12	26.84	Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_11060 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004252	Probable_transposase_24

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008483	transaminase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032003.2.1	MELO3C032003.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 170..251 e-value: 1.5E-9 score: 38.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..40
None	No IPR available	PANTHER	PTHR33499	FAMILY NOT NAMED	coord: 74..247

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C032003.2	Cucumber (Gy14) v2	cgybmedB215
MELO3C032003.2	Cucumber (Gy14) v1	cgymedB379
MELO3C032003.2	Cucurbita maxima (Rimu)	cmamedB151
MELO3C032003.2	Cucurbita maxima (Rimu)	cmamedB346
MELO3C032003.2	Cucurbita maxima (Rimu)	cmamedB777
MELO3C032003.2	Cucurbita moschata (Rifu)	cmomedB139
MELO3C032003.2	Cucurbita moschata (Rifu)	cmomedB332
MELO3C032003.2	Cucurbita moschata (Rifu)	cmomedB774
MELO3C032003.2	Cucurbita pepo (Zucchini)	cpemedB234
MELO3C032003.2	Cucurbita pepo (Zucchini)	cpemedB481
MELO3C032003.2	Cucurbita pepo (Zucchini)	cpemedB764
MELO3C032003.2	Wild cucumber (PI 183967)	cpimedB239
MELO3C032003.2	Cucumber (Chinese Long) v2	cumedB238
MELO3C032003.2	Melon (DHL92) v3.6.1	medmedB091
MELO3C032003.2	Bottle gourd (USVL1VR-Ls)	lsimedB280
MELO3C032003.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C032003.2	Watermelon (Charleston Gray)	medwcgB413
MELO3C032003.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C032003.2	Watermelon (97103) v1	medwmB448
MELO3C032003.2	Watermelon (97103) v1	medwmB472
MELO3C032003.2	Silver-seed gourd	carmedB0307
MELO3C032003.2	Silver-seed gourd	carmedB0384
MELO3C032003.2	Cucumber (Chinese Long) v3	cucmedB246
MELO3C032003.2	Watermelon (97103) v2	medwmbB421
MELO3C032003.2	Watermelon (97103) v2	medwmbB424
MELO3C032003.2	Wax gourd	medwgoB531
MELO3C032003.2	Wax gourd	medwgoB558