MELO3C032002.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032002.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr06 : 12982244 .. 12983585 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCCTAGCTCTGCGGTACATATATGTCTCTATTATTCTTAAGTTTTTGCAATATATGATTATGTACTAAATTTAGTTATTTTTATACCATTTTTAGGACCGAAGGTGTAGAATAACGTGCATACGCACCTCGTTGGGAGACTTTTTCTTAATGTTTATGTTTTTTTTTTCTATTTTGAGAACTATATTTTGTTGTAGTGAACTTATTCGTATTATTCATTTTAATTCTATTTTTTTAATTTGTGTTTGTATATTTCTTAATTTATTTTAATTTATATTTAATTTGTTTTAATTTAATCCAAAACTTCGGAAATTTTTTTTGAGCAATCCGAACATTATTGTGAATGTTTGAGCAAAATATTATAAGGAAAAAAGTAGAAATGAAATATTTAAAATATATATATAAAAAGAAATTTCCGACGTAAAGAAACGTCAGGAAAAAACGTTGGAAAAGAAGTTTTCCCAACGTCGAAATACGCATCAAGAGAGGCTGCGTCGGGAATGAGGTATTTCTGATGCAGCCTCTCTCGACGCCTTTCTCCCGACGTTCTTCTCGATGCCGTTTGGTACGTCGGGATATCCTTTCCCGACGTACTTTTCATTTTCACCGACGTTTTGTGGCGTCGGGAGTACCCCCGTCTCTTGTAGTGATAAGTGTCCTCAATAACAAAAAAATGACATGAATAAATAGATTACCACATGAACAACGACATTTTTTTTATGTCAAGTTATAGATAACGGTGACACATTTAAAGTGTCAATATAAGGGTATTAATGACAGTATATTGGTGTCATCTAAGCATATGTAACGACATTTTTTTCGAAGTATTGTTAAATTGCCTATCTTGACAGGGGCTTTAATGACGCAAAAATTGTATCGTTGAAACTCTTTACGATGCAAATTTTGTGTTGTTAAAACATTGACTAGGTCTAATTTATGTTTTTCTGTTAACAAAGTGTACTAGTCCTTACATGCTCCTACTATGAATCATTGCACTGTGGTTAAATGGATACAACGTTATTTACATAGGCTACTAGTTCTTTGGGTTTGTCCTTGACTAAATCTAGAGATTTATCGTTGACTGGTTACATAGATGCTAATTAGGCTAATCCTGATAACAGACGAAGTATTATTGGTTTCTGCATGTTCCACGATTCTAATTTAATCTCTTGGTCTTCCTCTAAGCAAAATGTTGTTTCTAGATCAAGCGTTGAGTGTGAATATAGAAGTATGTTTAACACCACTGTTGAAATTATTAGGTTTCTATCTTTACTCTCTGAGATTGACAATGTTTCTCCTTCGGTTCCTTTGTTGCTTTGTGTGAAACTCACGTCCTAA

mRNA sequence

ATGATCCCTAGCTCTGCGGACCGAAGGTGTAGAATAACGTGCATACGCACCTCGTTGGGAGACTTTTTCTTAATAAATTTCCGACGTAAAGAAACGTCAGGAAAAAACGTTGGAAAAGAAGTTTTCCCAACGTCGAAATACGCATCAAGAGAGGCTGCGTCGGGAATGAGCCTCTCTCGACGCCTTTCTCCCGACGTTCTTCTCGATGCCGTTTGGTACGTCGGGATATCCTTTCCCGACGCTAATCCTGATAACAGACGAAGTATTATTGGTTTCTGCATGTTCCACGATTCTAATTTAATCTCTTGGTCTTCCTCTAAGCAAAATGTTGTTTCTAGATCAAGCGTTGAGTGTGAATATAGAAGTATGTTTAACACCACTGTTGAAATTATTAGGTTTCTATCTTTACTCTCTGAGATTGACAATGTTTCTCCTTCGGTTCCTTTGTTGCTTTGTGTGAAACTCACGTCCTAA

Coding sequence (CDS)

ATGATCCCTAGCTCTGCGGACCGAAGGTGTAGAATAACGTGCATACGCACCTCGTTGGGAGACTTTTTCTTAATAAATTTCCGACGTAAAGAAACGTCAGGAAAAAACGTTGGAAAAGAAGTTTTCCCAACGTCGAAATACGCATCAAGAGAGGCTGCGTCGGGAATGAGCCTCTCTCGACGCCTTTCTCCCGACGTTCTTCTCGATGCCGTTTGGTACGTCGGGATATCCTTTCCCGACGCTAATCCTGATAACAGACGAAGTATTATTGGTTTCTGCATGTTCCACGATTCTAATTTAATCTCTTGGTCTTCCTCTAAGCAAAATGTTGTTTCTAGATCAAGCGTTGAGTGTGAATATAGAAGTATGTTTAACACCACTGTTGAAATTATTAGGTTTCTATCTTTACTCTCTGAGATTGACAATGTTTCTCCTTCGGTTCCTTTGTTGCTTTGTGTGAAACTCACGTCCTAA

Protein sequence

MIPSSADRRCRITCIRTSLGDFFLINFRRKETSGKNVGKEVFPTSKYASREAASGMSLSRRLSPDVLLDAVWYVGISFPDANPDNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIRFLSLLSEIDNVSPSVPLLLCVKLTS

Homology

[Close]

BLAST of MELO3C032002.2 vs. NCBI nr
Match: KZV54184.1 (hypothetical protein F511_36903 [Dorcoceras hygrometricum])

HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13
Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 0


Query: 55  GMSL--SRRLSPDVLLDAVWYVGISFPDANPDNRRSIIGFCMFHDSNLISWSSSKQNVVS 114
           G+SL  SR LS     DA W        ++PD+RRS+ GFC F   + ISWSS KQ+VVS
Sbjct: 315 GISLGRSRHLSLFGYCDADW-------GSDPDDRRSVSGFCWFLGGSPISWSSKKQSVVS 374

Query: 115 RSSVECEYRSMFNTTVEIIRFLSLLSEIDNVSPSVPLLLCVKLTS 158
           RSS E EYRS+ N T E++   SLL+E+    PS+PLL C  L++
Sbjct: 375 RSSTEAEYRSLANATAELLWIRSLLTELQVSVPSIPLLWCDNLST 412

[Close]

BLAST of MELO3C032002.2 vs. NCBI nr
Match: XP_021903059.1 (uncharacterized protein LOC110818467 [Carica papaya])

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-11
Identity = 44/80 (55.00%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 77  SFPDAN----PDNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIR 136
           +F DA+    PD RRSI GFC+F  S+LISW S KQ VVSRSS E EYRSM NTT EI+ 
Sbjct: 169 AFSDADWATCPDTRRSITGFCVFLGSSLISWKSKKQQVVSRSSAEAEYRSMANTTCEIVW 228

Query: 137 FLSLLSEIDNVSPSVPLLLC 153
            L LL ++        LL C
Sbjct: 229 ILKLLRDLKVQHQGPALLYC 248

[Close]

BLAST of MELO3C032002.2 vs. NCBI nr
Match: KYP76690.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 75.1 bits (183), Expect = 2.4e-10
Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 59  SRRLSPDVLLDAVWYVGISFPDANPDNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVEC 118
           S + S +   DA W        ++PD+RRS   FC+F   NL+SWSS KQ++V+RSS E 
Sbjct: 93  STKYSLEAFCDADW-------ASDPDDRRSTSRFCVFFGPNLVSWSSKKQSLVARSSTEA 152

Query: 119 EYRSMFNTTVEIIRFLSLLSEIDNVSPSVPL 150
           EYRSM + T+EII   SLL E+  VS +  L
Sbjct: 153 EYRSMAHATIEIIWIQSLLKELGIVSDTPTL 176

[Close]

BLAST of MELO3C032002.2 vs. NCBI nr
Match: XP_019073355.1 (PREDICTED: uncharacterized protein LOC109121949 [Vitis vinifera])

HSP 1 Score: 74.3 bits (181), Expect = 4.1e-10
Identity = 46/114 (40.35%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 41  VFPTSKYASREAASGM--SLSRRLSPDVLLDAVWYVGISFPDANPDNRRSIIGFCMFHDS 100
           VF   +Y  R    G+  S + ++      D+ W        + PD RR I GFC+F  +
Sbjct: 60  VFRILQYIKRTPGQGLFFSSNSKVQLKAFADSDW-------ASCPDTRRFIFGFCVFLGT 119

Query: 101 NLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIRFLSLLSEIDNVSPSVPLLLC 153
           +LISW S KQ +VSRSS E EYRSM NTT EI+  LSLL ++        +L C
Sbjct: 120 SLISWKSKKQPIVSRSSAEAEYRSMANTTFEILWLLSLLHDLKIAHHGPVVLYC 166

[Close]

BLAST of MELO3C032002.2 vs. NCBI nr
Match: XP_021897495.1 (uncharacterized protein LOC110814369 [Carica papaya])

HSP 1 Score: 73.9 bits (180), Expect = 5.3e-10
Identity = 41/80 (51.25%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 77  SFPDAN----PDNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIR 136
           +F DA+    PD RRS+ GFC+F  S+L+SW   KQ VVSRSS E EYRSM NTT EI+ 
Sbjct: 235 AFSDADWGTCPDTRRSLTGFCVFLGSSLVSWKLKKQQVVSRSSAEAEYRSMANTTCEIVW 294

Query: 137 FLSLLSEIDNVSPSVPLLLC 153
            L LL ++        LL C
Sbjct: 295 TLKLLRDLKVQHQGPALLYC 314

[Close]

BLAST of MELO3C032002.2 vs. TAIR10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 55.5 bits (132), Expect = 3.5e-08
Identity = 30/69 (43.48%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 84  DNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIRFLSLLSEIDNV 143
           D RRS  G+CMF  ++LISW S KQ VVS+SS E EYR++   T E++       E+   
Sbjct: 455 DTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP 514

Query: 144 SPSVPLLLC 153
                LL C
Sbjct: 515 LSKPTLLFC 523

[Close]

BLAST of MELO3C032002.2 vs. TAIR10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 8.7e-07
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 86  RRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEI 131
           RRS  GFC F   N+ISWS+ +Q  VSRSS E EYR++  T  E+
Sbjct: 179 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAEL 223

[Close]

BLAST of MELO3C032002.2 vs. Swiss-Prot
Match: sp|P92519|M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-05
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 86  RRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEI 131
           RRS  GFC F   N+ISWS+ +Q  VSRSS E EYR++  T  E+
Sbjct: 179 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAEL 223

[Close]

BLAST of MELO3C032002.2 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.3e-04
Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 84   DNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIRFLSLLSEIDNV 143
            D+  S  G+ ++   + ISWSS KQ  V RSS E EYRS+ NT+ E+    SLL+E+   
Sbjct: 1305 DDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQ 1364

Query: 144  SPSVPLLLC 153
                P++ C
Sbjct: 1365 LSHPPVIYC 1373

[Close]

BLAST of MELO3C032002.2 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.9e-04
Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 84   DNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIRFLSLLSEIDNV 143
            D+  S  G+ ++   + ISWSS KQ  V RSS E EYRS+ NT+ E+    SLL+E+   
Sbjct: 1322 DDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIR 1381

Query: 144  SPSVPLLLC 153
                P++ C
Sbjct: 1382 LTRPPVIYC 1390

[Close]

BLAST of MELO3C032002.2 vs. TrEMBL
Match: tr|A0A2N9F208|A0A2N9F208_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12899 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-11
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 77   SFPDA----NPDNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIR 136
            +F DA    +PD+RRS  G+C+F   NLISWSS KQ  VSRSS E EYR++ + + E++ 
Sbjct: 999  AFSDADWAGSPDDRRSTSGYCLFLGRNLISWSSRKQRTVSRSSTESEYRAIAHASAELVW 1058

Query: 137  FLSLLSEIDNVSPSVPLLLC 153
              SLLSE+   SPS P+L C
Sbjct: 1059 LRSLLSELGVPSPSTPILWC 1078

[Close]

BLAST of MELO3C032002.2 vs. TrEMBL
Match: tr|A0A2N9HHN1|A0A2N9HHN1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39021 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-11
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 77  SFPDA----NPDNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIR 136
           +F DA    +PD+RRS  G+C+F   NLISWSS KQ  VSRSS E EYR++ + + E++ 
Sbjct: 709 AFSDADWAGSPDDRRSTSGYCLFLGRNLISWSSRKQRTVSRSSTESEYRAIAHASAELVW 768

Query: 137 FLSLLSEIDNVSPSVPLLLC 153
             SLLSE+   SPS P+L C
Sbjct: 769 LRSLLSELGVPSPSTPILWC 788

[Close]

BLAST of MELO3C032002.2 vs. TrEMBL
Match: tr|A0A2N9FEG6|A0A2N9FEG6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13420 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-11
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 77   SFPDA----NPDNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIR 136
            +F DA    +PD+RRS  G+C+F   NLISWSS KQ  VSRSS E EYR++ + + E++ 
Sbjct: 1108 AFSDADWAGSPDDRRSTSGYCLFLGRNLISWSSRKQRTVSRSSTESEYRAIAHASAELVW 1167

Query: 137  FLSLLSEIDNVSPSVPLLLC 153
              SLLSE+   SPS P+L C
Sbjct: 1168 LRSLLSELGVPSPSTPILWC 1187

[Close]

BLAST of MELO3C032002.2 vs. TrEMBL
Match: tr|A0A2N9I1U4|A0A2N9I1U4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45896 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 77  SFPDA----NPDNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIR 136
           +F DA    +PD+RRS  G+C+F   NLISWSS KQ  VSR S E EYR++ + + E++ 
Sbjct: 536 AFSDADWAGSPDDRRSTSGYCLFLGRNLISWSSRKQRTVSRFSTESEYRAIAHASAELVW 595

Query: 137 FLSLLSEIDNVSPSVPLLLC 153
             SLLSE+   SPS P+L C
Sbjct: 596 LRSLLSELGVPSPSTPILWC 615

[Close]

BLAST of MELO3C032002.2 vs. TrEMBL
Match: tr|A0A2N9GM36|A0A2N9GM36_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28410 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10
Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 77  SFPDAN----PDNRRSIIGFCMFHDSNLISWSSSKQNVVSRSSVECEYRSMFNTTVEIIR 136
           +F DA+    PD+RRS  G+C+F   NLISW+S KQ  VSRSS E EYR++ + + EII 
Sbjct: 812 AFSDADWASCPDDRRSTTGYCLFLGRNLISWTSRKQRTVSRSSTESEYRAVAHASTEIIW 871

Query: 137 FLSLLSEIDNVSPSVPLLLC 153
             SLLSE+   S + PLL C
Sbjct: 872 LCSLLSELGIASSTPPLLWC 891

The following BLAST results are available for this feature:

BLAST of MELO3C032002.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KZV54184.1	2.3e-13	48.57	hypothetical protein F511_36903 [Dorcoceras hygrometricum]	[more]
XP_021903059.1	2.8e-11	55.00	uncharacterized protein LOC110818467 [Carica papaya]	[more]
KYP76690.1	2.4e-10	46.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
XP_019073355.1	4.1e-10	40.35	PREDICTED: uncharacterized protein LOC109121949 [Vitis vinifera]	[more]
XP_021897495.1	5.3e-10	51.25	uncharacterized protein LOC110814369 [Carica papaya]	[more]

BLAST of MELO3C032002.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23160.1	3.5e-08	43.48	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	8.7e-07	53.33	DNA/RNA polymerases superfamily protein	[more]

BLAST of MELO3C032002.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P92519\|M810_ARATH	1.6e-05	53.33	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9ZT94\|POLR2_ARATH	2.3e-04	40.58	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
sp\|Q94HW2\|POLR1_ARATH	3.9e-04	40.58	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of MELO3C032002.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2N9F208\|A0A2N9F208_FAGSY	2.4e-11	51.25	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12899 PE=4 SV=1	[more]
tr\|A0A2N9HHN1\|A0A2N9HHN1_FAGSY	2.4e-11	51.25	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39021 PE=4 SV=1	[more]
tr\|A0A2N9FEG6\|A0A2N9FEG6_FAGSY	2.4e-11	51.25	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13420 PE=4 SV=1	[more]
tr\|A0A2N9I1U4\|A0A2N9I1U4_FAGSY	1.2e-10	50.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45896 PE=4 SV=1	[more]
tr\|A0A2N9GM36\|A0A2N9GM36_FAGSY	1.6e-10	51.25	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28410 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0052923	all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0050347	trans-octaprenyltranstransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032002.2.1	MELO3C032002.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 155..157
None	No IPR available	PANTHER	PTHR44381:SF3	SUBFAMILY NOT NAMED	coord: 82..147
None	No IPR available	PANTHER	PTHR44381	FAMILY NOT NAMED	coord: 82..147
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 78..153 e-value: 2.8953E-22 score: 86.3681

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C032002.2	Cucumber (Gy14) v2	cgybmedB215
MELO3C032002.2	Cucumber (Gy14) v1	cgymedB379
MELO3C032002.2	Cucurbita maxima (Rimu)	cmamedB151
MELO3C032002.2	Cucurbita maxima (Rimu)	cmamedB346
MELO3C032002.2	Cucurbita maxima (Rimu)	cmamedB777
MELO3C032002.2	Cucurbita moschata (Rifu)	cmomedB139
MELO3C032002.2	Cucurbita moschata (Rifu)	cmomedB332
MELO3C032002.2	Cucurbita moschata (Rifu)	cmomedB774
MELO3C032002.2	Cucurbita pepo (Zucchini)	cpemedB234
MELO3C032002.2	Cucurbita pepo (Zucchini)	cpemedB481
MELO3C032002.2	Cucurbita pepo (Zucchini)	cpemedB764
MELO3C032002.2	Wild cucumber (PI 183967)	cpimedB239
MELO3C032002.2	Cucumber (Chinese Long) v2	cumedB238
MELO3C032002.2	Melon (DHL92) v3.6.1	medmedB091
MELO3C032002.2	Bottle gourd (USVL1VR-Ls)	lsimedB280
MELO3C032002.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C032002.2	Watermelon (Charleston Gray)	medwcgB413
MELO3C032002.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C032002.2	Watermelon (97103) v1	medwmB448
MELO3C032002.2	Watermelon (97103) v1	medwmB472
MELO3C032002.2	Silver-seed gourd	carmedB0307
MELO3C032002.2	Silver-seed gourd	carmedB0384
MELO3C032002.2	Cucumber (Chinese Long) v3	cucmedB246
MELO3C032002.2	Watermelon (97103) v2	medwmbB421
MELO3C032002.2	Watermelon (97103) v2	medwmbB424
MELO3C032002.2	Wax gourd	medwgoB531
MELO3C032002.2	Wax gourd	medwgoB558