MELO3C031998.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031998.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 12985375 .. 12986114 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGTCGGGAATTCCCCTTTTTCCAACGCTTTTTGGGGGATTTTCCGATGCCGCGGCACTGCGTCAGGAAATCCCCTTTTTAATCGTTTCAGTTCTGTATTTTACAGAACTGAAATCGAGAGGGGAAAAAAGAGAAGAAGCCGAGAGCCGTCGCCGTTTCCGTCGCCCTTCCGCAGCTGTTCTGCTGCTGTCTGTCATCGTTGTCCCTCGCCGCCGTCTGCCACTTTAGGTAAGTGAAAAATTAAAATTTATTTAGTTTAAATTTATGTTTTAGGGTTTTTTTTAGGAAAATTTTTTAGGAAAATTTATGGCAATTAATTTACTAATCAAATGTATTATGTTTCATGTTCAAGATTTTAATATTTTCCTGAATGTCATTATCTTATTAGGTAATAGGATATCGATATAATGGGTGTGTCCTCCATGTGCTCTGTCTTTTTAGGACTGCCCATCTATTAATTGCTCTTTTTTTTTTTTTTCTCTGGTTCATTTCTGAAAAGAGAGGATTGTGATTATACTCATTGAAGACATTTAAATTGACATTCTAGTTTTGTGTTTGATTAAGTTTTTTTTTTAGTATAAGCTATTTGTAAGGTTAAATTCCATGAAGGTAAGTTTCCAAATTACCATCAAATTTGTTTGGAACCCTCCGATTATATAATTTTTGGGTGATGTATTGTCATTTTTCATAGATTTGAATTTGGGTGTTTTGGATTTTAGCTGCTAGAATTGATTAA

mRNA sequence

ATGGGCGTCGGGAATTCCCCTTTTTCCAACGCTTTTTGGGGGATTTTCCGATGCCGCGGCACTGCGTCAGGAAATCCCCTTTTTAATCGTTTCAGTTCTGTATTTTACAGAACTGAAATCGAGAGGGGAAAAAAGAGAAGAAGCCGAGAGCCGTCGCCGTTTCCGTCGCCCTTCCGCAGCTGTTCTGCTGCTGTCTGTCATCGTTGTCCCTCGCCGCCGTCTGCCACTTTAGCTATTTGTAAGGTTAAATTCCATGAAGCTGCTAGAATTGATTAA

Coding sequence (CDS)

ATGGGCGTCGGGAATTCCCCTTTTTCCAACGCTTTTTGGGGGATTTTCCGATGCCGCGGCACTGCGTCAGGAAATCCCCTTTTTAATCGTTTCAGTTCTGTATTTTACAGAACTGAAATCGAGAGGGGAAAAAAGAGAAGAAGCCGAGAGCCGTCGCCGTTTCCGTCGCCCTTCCGCAGCTGTTCTGCTGCTGTCTGTCATCGTTGTCCCTCGCCGCCGTCTGCCACTTTAGCTATTTGTAAGGTTAAATTCCATGAAGCTGCTAGAATTGATTAA

Protein sequence

MGVGNSPFSNAFWGIFRCRGTASGNPLFNRFSSVFYRTEIERGKKRRSREPSPFPSPFRSCSAAVCHRCPSPPSATLAICKVKFHEAARID
Homology
[Close]
BLAST of MELO3C031998.2 vs. NCBI nr
Match: ADN34153.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-04
Identity = 38/85 (44.71%), Postives = 45/85 (52.94%), Query Frame = 0 

Query: 1  MGVGNSPFSNAFWGIFRCRGTASGNPLFNRFSSVFYRTEIERGKKRRSREPSPFPSPFRS 60
          M +GN  F +A  GI RC  T SGNPL+ RFSSV YRTE ERG     R    +     S
Sbjct: 1  MSIGNPLFPDALLGISRCCTTGSGNPLYKRFSSVKYRTETERGASIFRR----YCRRRLS 60

Query: 61 CSAAVCHRCPSPPSATLAICKVKFH 86
           S+ +      PPSATL    VK +
Sbjct: 61 LSSLLSLAAVPPPSATLGGLIVKLN 81

[Close]
BLAST of MELO3C031998.2 vs. TrEMBL
Match: tr|E5GCF4|E5GCF4_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.8e-05
Identity = 38/85 (44.71%), Postives = 45/85 (52.94%), Query Frame = 0 

Query: 1  MGVGNSPFSNAFWGIFRCRGTASGNPLFNRFSSVFYRTEIERGKKRRSREPSPFPSPFRS 60
          M +GN  F +A  GI RC  T SGNPL+ RFSSV YRTE ERG     R    +     S
Sbjct: 1  MSIGNPLFPDALLGISRCCTTGSGNPLYKRFSSVKYRTETERGASIFRR----YCRRRLS 60

Query: 61 CSAAVCHRCPSPPSATLAICKVKFH 86
           S+ +      PPSATL    VK +
Sbjct: 61 LSSLLSLAAVPPPSATLGGLIVKLN 81

The following BLAST results are available for this feature:
BLAST of MELO3C031998.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34153.11.5e-0444.71hypothetical protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C031998.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031998.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031998.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GCF4|E5GCF4_CUCME9.8e-0544.71Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031998.2.1MELO3C031998.2.1mRNA