MELO3C031943.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C031943.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionaspartyl protease APCB1 isoform X2
Locationchr06 : 11496649 .. 11498540 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGGTGAGAATATGTGTTTGTATGCAGAAATAAAGGTAAGTGGTCTTGGAAAGTTTTTTAATATAATGGTCCCACCTATTTTATTTTTGTGTATGCATTTATTTAAGAAGTTGTTAAGGGTTTGGTTGAGATCCTCCCTTAAAAGATGGGCCCATAAGTGGTTAAGATTTTATCTTATATATTGGTAACTTCCTGAAGAAGACAACAGGCAGAAAAGAACCAAGGATATATACTGATTATGGTAAGGGGCTTCTCTTACGCTGTTTGACGAAAAAGGAAGGAAAAAAAATAGATAGAAGATGATTTCCAAATGGAGTAAAAGTTGAATACATCACTAGCAATTAAAAGAGAGATTTGTTCTACCTTCAAATAGTTATGATTGTTACTATTATTTCATGATTAAGTTCTGTGGAAACAGTCCTAGGACAGTACAATAACAATAGTGTAGAAGTGTTGTTCCTCCAGTTATGACTATGTATTCAAAATTTATTGTATTCATGAATAATACAATCCTCTATTTCGGGTAGACAGTCCCCCAGATGTAGATGATATTCAGCGAACTGAGTTAACAAATGTTGATGTGTTATCTGTCTCTTTTTATGTTACTATAGTGTTGCACTCTCTATAAGTTATATATCATTAAAATCATTCATATTTCAATCCAAACTAAAAATTATTTTCGATAGATTTGAATGAAAATTATATTATGATTTTTTATAAACGTCAATTAATATGTAATTTTTCTTGACNCGCCTCCTACCCTAAATTTTCTTTAATTTCTTGTCTCTGTTGTATTTCCATCGTGGTTTCGCCGAGGTGTGGTTGCGCCGATTTTCGTCGAACATCGATTTGTCTTGTCGAACGTCACTCCGTTGAACGTCTTGCCGAACGTCGTTTGGTGGTCGCGCCGTTTAGTGGTTGTGGCCGACGTCATCTTCCGTCTTCGACCGTATTGAGTTCGCTGTCCACTGGGCTTATCATCCGGTCGTCTCACATTAATTTGTCGAGGGAGCTTTTTGCTGGCACTCCTAGGAAGCTTGTTGTCGTAGTAGGCATTGCCCTCATTGCTGTTTATCTTTATGCTTCTAATTTTCCGAAGACCATTCAGGAGTTGCATCGTTCTAAGAAGAACGATGACGATGTACTTGGAGTTTTGAAGCCTAGTTGGAGTTTCCCCTTTATTTCCAATCGAAGTTGGGTGAGATTTCCAGCTTAAGTTGGGTAGGACTGTTCGTGTAAATAAGGATGATTTGGGTGTAAGATTTACTATGTACTTGGAGTTTTGAAGCCTAGTAAATTGATTTCTGCCTCTTTAAAGTCTGATTCATCAGTCGTATTTTCTATGCGGGGAGATATCTATCCAGATGGGTATGTTTTTATCTTGTCTTCTTCATATTTTTACTTTATGTTCGGTGATGAATACGTCAATCGTCACCCATTCCAAGATATTGCTTTGAGTTTTTAGCTTAAAGTAGTTGAACACTGAAATACTTTTTGAAAGCTTTTTTTTTATCGGAAGATCAAGAAGAATGAATAACAAGGTACTTTAGCAGGGGAAGAATAAACGACTAGAAAAATAAATATTCATGGTCCAGCAAAGCTGATGTTGCATCGTTAAAAACCTTGGCTTATACCAAAAGTCAAACTTTTCAATTGACTTGAAAATAATGATGTGGGTTACTTAATGCCACTTTGAATGACCAAGAAATTATGTAGCACAACTAAATAAGCCACATAGAGATATGATTATACCGTTTCTGACTGTAAATTAGGATTCTCAAGTTTATGCATCTAAATTCTGGTCATTTTGTTTAGATAGCATACAATGTTTGTCATGATCATGGAGATGCCTTTATTTGCACTAACATGGATTTCACCAACACATAG

mRNA sequence

ATGGCTGGGTGTGGTTGCGCCGATTTTCGTCGAACATCGATTTGTCTTGTCGAACGTCACTCCGTTGAACGTCTTGCCGAACGTCGTTTGGTGGTCGCGCCGTTTAGTGGTTGTGGCCGACGTCATCTTCCGTCTTCGACCGTATTGAGTTCGCTGTCCACTGGGCTTATCATCCGGTCGTCTCACATTAATTTGTCGAGGGAGCTTTTTGCTGGCACTCCTAGGAAGCTTGTTGTCGTAGTAGGCATTGCCCTCATTGCTGTTTATCTTTATGCTTCTAATTTTCCGAAGACCATTCAGGAGTTGCATCGTTCTAAGAAGAACGATGACGATGTACTTGGAGTTTTGAAGCCTAGTTGGAGTTTCCCCTTTATTTCCAATCGAAGTTGGCCTAGTAAATTGATTTCTGCCTCTTTAAAGTCTGATTCATCAGTCGTATTTTCTATGCGGGGAGATATCTATCCAGATGGATCAAGAAGAATGAATAACAAGATAGCATACAATGTTTGTCATGATCATGGAGATGCCTTTATTTGCACTAACATGGATTTCACCAACACATAG

Coding sequence (CDS)

ATGGCTGGGTGTGGTTGCGCCGATTTTCGTCGAACATCGATTTGTCTTGTCGAACGTCACTCCGTTGAACGTCTTGCCGAACGTCGTTTGGTGGTCGCGCCGTTTAGTGGTTGTGGCCGACGTCATCTTCCGTCTTCGACCGTATTGAGTTCGCTGTCCACTGGGCTTATCATCCGGTCGTCTCACATTAATTTGTCGAGGGAGCTTTTTGCTGGCACTCCTAGGAAGCTTGTTGTCGTAGTAGGCATTGCCCTCATTGCTGTTTATCTTTATGCTTCTAATTTTCCGAAGACCATTCAGGAGTTGCATCGTTCTAAGAAGAACGATGACGATGTACTTGGAGTTTTGAAGCCTAGTTGGAGTTTCCCCTTTATTTCCAATCGAAGTTGGCCTAGTAAATTGATTTCTGCCTCTTTAAAGTCTGATTCATCAGTCGTATTTTCTATGCGGGGAGATATCTATCCAGATGGATCAAGAAGAATGAATAACAAGATAGCATACAATGTTTGTCATGATCATGGAGATGCCTTTATTTGCACTAACATGGATTTCACCAACACATAG

Protein sequence

MAGCGCADFRRTSICLVERHSVERLAERRLVVAPFSGCGRRHLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDDVLGVLKPSWSFPFISNRSWPSKLISASLKSDSSVVFSMRGDIYPDGSRRMNNKIAYNVCHDHGDAFICTNMDFTNT
BLAST of MELO3C031943.2 vs. NCBI nr
Match: XP_008457519.1 (PREDICTED: aspartyl protease APCB1 isoform X1 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0

Query: 42  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 101
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 102 LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 158
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

BLAST of MELO3C031943.2 vs. NCBI nr
Match: XP_008457584.1 (PREDICTED: aspartyl protease APCB1 isoform X2 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0

Query: 42  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 101
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 102 LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 158
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

BLAST of MELO3C031943.2 vs. NCBI nr
Match: XP_004137470.1 (PREDICTED: aspartic proteinase Asp1 [Cucumis sativus] >KGN64113.1 hypothetical protein Csa_1G042250 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-20
Identity = 68/124 (54.84%), Postives = 75/124 (60.48%), Query Frame = 0

Query: 63  INLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD----------V 122
           I LSRELFAGTPRKLV V+GIAL AVYLYASNFP+TI+EL RS++NDDD           
Sbjct: 74  IPLSRELFAGTPRKLVFVLGIALAAVYLYASNFPETIRELRRSERNDDDRPSSFLFPLYF 133

Query: 123 LGVLKPSWSFPFISNRS-------------------WPSKLISASLKSDSSVVFSMRGDI 158
              L  S  F     R+                    PSKLISASLKSDSS VF +RGDI
Sbjct: 134 QSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVPKPSKLISASLKSDSSAVFPVRGDI 193

BLAST of MELO3C031943.2 vs. NCBI nr
Match: XP_022924032.1 (aspartyl protease APCB1 [Cucurbita moschata] >XP_022924033.1 aspartyl protease APCB1 [Cucurbita moschata])

HSP 1 Score: 103.2 bits (256), Expect = 9.7e-19
Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 0

Query: 63  INLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD----------- 122
           I LSRELFAGTPRKLVV++ IAL+A+YLY+S+FP+T+QEL  S+KNDDD           
Sbjct: 74  IPLSRELFAGTPRKLVVLLSIALVAIYLYSSSFPETLQELRSSEKNDDDRRTSLLFPLYF 133

Query: 123 ----------------VLGVLKPSWSFPF--ISNRSWPSKLISASLKSDSSVVFSMRGDI 158
                             G+ K   S  F  +     P+KLIS++LKSDSS VF +RGDI
Sbjct: 134 QSELGDSSDFQLKLGRTKGLNKDDLSAAFNDVLGVPKPTKLISSTLKSDSSAVFPVRGDI 193

BLAST of MELO3C031943.2 vs. NCBI nr
Match: XP_023519792.1 (aspartyl protease APCB1 [Cucurbita pepo subsp. pepo] >XP_023519793.1 aspartyl protease APCB1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.2 bits (256), Expect = 9.7e-19
Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 0

Query: 63  INLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD----------- 122
           I LSRELFAGTPRKLVV++ IAL+A+YLY+S+FP+T+QEL  S+KNDDD           
Sbjct: 74  IPLSRELFAGTPRKLVVLLSIALVAIYLYSSSFPETLQELRSSEKNDDDRRTSLLFPLYF 133

Query: 123 ----------------VLGVLKPSWSFPF--ISNRSWPSKLISASLKSDSSVVFSMRGDI 158
                             G+ K   S  F  +     P+KLIS++LKSDSS VF +RGDI
Sbjct: 134 QSELGDSSDFQLKLGRTKGLNKDDLSAAFNDVLGVPKPTKLISSTLKSDSSAVFPVRGDI 193

BLAST of MELO3C031943.2 vs. TrEMBL
Match: tr|A0A1S3C6I2|A0A1S3C6I2_CUCME (aspartyl protease APCB1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497165 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0

Query: 42  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 101
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 102 LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 158
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

BLAST of MELO3C031943.2 vs. TrEMBL
Match: tr|A0A1S3C5U5|A0A1S3C5U5_CUCME (aspartyl protease APCB1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497165 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0

Query: 42  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 101
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 102 LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 158
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

BLAST of MELO3C031943.2 vs. TrEMBL
Match: tr|A0A0A0LQR7|A0A0A0LQR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042250 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-20
Identity = 68/124 (54.84%), Postives = 75/124 (60.48%), Query Frame = 0

Query: 63  INLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD----------V 122
           I LSRELFAGTPRKLV V+GIAL AVYLYASNFP+TI+EL RS++NDDD           
Sbjct: 74  IPLSRELFAGTPRKLVFVLGIALAAVYLYASNFPETIRELRRSERNDDDRPSSFLFPLYF 133

Query: 123 LGVLKPSWSFPFISNRS-------------------WPSKLISASLKSDSSVVFSMRGDI 158
              L  S  F     R+                    PSKLISASLKSDSS VF +RGDI
Sbjct: 134 QSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVPKPSKLISASLKSDSSAVFPVRGDI 193

BLAST of MELO3C031943.2 vs. TrEMBL
Match: tr|A0A2N9EF53|A0A2N9EF53_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1163 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-05
Identity = 39/118 (33.05%), Postives = 56/118 (47.46%), Query Frame = 0

Query: 70  FAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD------VLGVLKPSW--- 129
           F GTPRKL+  +GI+L+A+ LY S   +T+QE   S  +DDD       L  L P W   
Sbjct: 86  FIGTPRKLLAFLGISLLALLLYGSLSSQTLQEFRGSDDHDDDDHRPTSFLFPLYPKWWTP 145

Query: 130 -------------------SFPFISNRSWP--SKLISASLKSDSSVVFSMRGDIYPDG 158
                               FP       P  +KL+++  K DS+ +  +RG++YPDG
Sbjct: 146 QRDVELKLGSFVDTDKRDLVFPTEDGIGEPKINKLVASKSKLDSTTILPVRGNVYPDG 203

BLAST of MELO3C031943.2 vs. TrEMBL
Match: tr|A0A2P5F9M1|A0A2P5F9M1_9ROSA (Aspartic peptidase OS=Trema orientalis OX=63057 GN=TorRG33x02_097230 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.9e-05
Identity = 38/121 (31.40%), Postives = 58/121 (47.93%), Query Frame = 0

Query: 66  SRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD-------------- 125
           S +LF G PRKL +++GI++ A+ LY   +P  ++E  RS  NDDD              
Sbjct: 77  SFKLFNGVPRKLFLLLGISIFALVLYTHVYPMVVEEFRRS--NDDDGPKSFIFPLYPKLG 136

Query: 126 -------------VLGVLKPSWSFPFIS--NRSWPSKLISASLKSDSSVVFSMRGDIYPD 158
                         +   K     PF         +KL+S+++K DSS +F +RG++YPD
Sbjct: 137 TRGKNDAELKLGRFVDFEKEDVVTPFGGGIRAQKVNKLVSSAVKVDSSTIFPVRGNVYPD 195

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008457519.11.9e-2252.41PREDICTED: aspartyl protease APCB1 isoform X1 [Cucumis melo][more]
XP_008457584.11.9e-2252.41PREDICTED: aspartyl protease APCB1 isoform X2 [Cucumis melo][more]
XP_004137470.12.3e-2054.84PREDICTED: aspartic proteinase Asp1 [Cucumis sativus] >KGN64113.1 hypothetical p... [more]
XP_022924032.19.7e-1949.19aspartyl protease APCB1 [Cucurbita moschata] >XP_022924033.1 aspartyl protease A... [more]
XP_023519792.19.7e-1949.19aspartyl protease APCB1 [Cucurbita pepo subsp. pepo] >XP_023519793.1 aspartyl pr... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C6I2|A0A1S3C6I2_CUCME1.2e-2252.41aspartyl protease APCB1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497165 PE=3 ... [more]
tr|A0A1S3C5U5|A0A1S3C5U5_CUCME1.2e-2252.41aspartyl protease APCB1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497165 PE=3 ... [more]
tr|A0A0A0LQR7|A0A0A0LQR7_CUCSA1.5e-2054.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042250 PE=3 SV=1[more]
tr|A0A2N9EF53|A0A2N9EF53_FAGSY1.8e-0533.05Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1163 PE=3 SV=1[more]
tr|A0A2P5F9M1|A0A2P5F9M1_9ROSA6.9e-0531.40Aspartic peptidase OS=Trema orientalis OX=63057 GN=TorRG33x02_097230 PE=3 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0008233 peptidase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031943.2.1MELO3C031943.2.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None