MELO3C031819.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031819.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 7349674 .. 7351244 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTGTACATGGAAAGATATAGGTATGTAAATAACATGTATGAACTGTTATTATGGGACAGCTTTTGTACCAACCCTTACCAGTTTGTAGTATCTTCTGGCAGGTGAAGGTGTAAGGAATCGAAAACAAAGTCGTCATAGCTGATGCTGCCACTCTTGAATTGCATTCAGAAGAGCATAATTTGGTACAAGATTACAGTGCTCAAGTTTAAGATTTGTCATCGGAGAAGTGTTGTGGCCACTTTGGAACCATCCTCTTATTGCATCAGCTTCGTATGTGAATCCATCTGCAGCAATTAGTGGATCTTTCATAATTTCCTGAATTAATCAAAGGGTTTCAAGTAAGTTTCCCTCTCTATCTCTTTAAATAATGTAAATTTACCAAACATCCTCAGGAAACCATTTTCCGCTAGACTTTTACCTGAAAAATCGGACACGTAAAATGTGCAGGCACTCGAGAGTGTTTCTTCAGACTCGAACATGATGCTGAGGCAATGGATCTCATTGGCTCCAAAACACACCATAATTCTGAGACAAGGTCAGGCCGATCCAACTTTTCCTTCTCGCAGCACCTCAATGCCACAAGAGCTAATTGCTCTGCTAGATCATGTGGCCAGTCTCCAGCTGATGAGTCTAAAACGACAACAATGTTGTCATTTTCTATAGCACATTTTACATCTTTTACTATACCCGGAGGTGTTCTGCCAGTTAAAATTCGCAGCAAAATAACACCAACAGAGTAGACATCTGATTCTGAAGTGAACTTTCCCGTCTCAAGATATTCAGGATCTATATATGGATTATTTTCTTTCGATATATTACATACTGAGGCCGAATTAAAGGCCTTCTCTTCTTGCGGGATCAAACGAGAGATGCCCAGACCACCTAGTTTGGCAATAAAATTGGTATCAAGTAGGATTTTGCTTGGTTTTATATCCCCGTGGACAATGCAAGGGTCGCTGTAATGAAGAAATATAAGGGCTGAGCAGATATCAGCAGCAATGCGAATCCGTGTCTGCCATGGAAGTGGGCAATTGTGATTTTTGCAGGCAAGGTGATCTTCCAAACTTCCATTTTTTAAATTTTCATACACTATTAACCTAGATTCTGGACATGCTCCAATAATTGAAACCAGGTTGGGATGCCTAACCCTACTCAAGACCTCAACCTGCTATTCAACAATAGAAAACGAAACACGTAGTTAAAAATCAATTGTGTATATAATCATAAACCAGCAAACAAGACATGAATGTGAACAACGTGGTGAAAATATTGAACTTACGCTAATCTACTAGTTTTTTAGGTTAGTGGAGACTTAGGCTAAGATATTTAAATCCCGGCAGTGTTGGTTGCTCCTCTTTCATATTAATAGTAGTCCATATATTGGACATGTTGATCTACAAGCATACATGGAATGGGAAACCATGAGAGTAGAGTAAAATATCACAGTTTTCATTTTTATTTTTATATTAACAGTTATTTGGACCAACTTCGCCTATTCCTACTGAGCAATCATCTAACCACACTACATTTAGTTACAACAAAAACTCATGGAATATTAAATTTTAA

mRNA sequence

ATGTCCTGTACATGGAAAGATATAGGCACTCGAGAGTGTTTCTTCAGACTCGAACATGATGCTGAGGCAATGGATCTCATTGGCTCCAAAACACACCATAATTCTGAGACAAGGTCAGGCCGATCCAACTTTTCCTTCTCGCAGCACCTCAATGCCACAAGAGCTAATTGCTCTGCTAGATCATGTGGCCAGTCTCCAGCTGATGAGTCTAAAACGACAACAATGTTGTCATTTTCTATAGCACATTTTACATCTTTTACTATACCCGGAGATATCAGCAGCAATGCGAATCCGTGTCTGCCATGGAAGTGGGCAATTGTGATTTTTGCAGGCAAGTTATTTGGACCAACTTCGCCTATTCCTACTGAGCAATCATCTAACCACACTACATTTAGTTACAACAAAAACTCATGGAATATTAAATTTTAA

Coding sequence (CDS)

ATGTCCTGTACATGGAAAGATATAGGCACTCGAGAGTGTTTCTTCAGACTCGAACATGATGCTGAGGCAATGGATCTCATTGGCTCCAAAACACACCATAATTCTGAGACAAGGTCAGGCCGATCCAACTTTTCCTTCTCGCAGCACCTCAATGCCACAAGAGCTAATTGCTCTGCTAGATCATGTGGCCAGTCTCCAGCTGATGAGTCTAAAACGACAACAATGTTGTCATTTTCTATAGCACATTTTACATCTTTTACTATACCCGGAGATATCAGCAGCAATGCGAATCCGTGTCTGCCATGGAAGTGGGCAATTGTGATTTTTGCAGGCAAGTTATTTGGACCAACTTCGCCTATTCCTACTGAGCAATCATCTAACCACACTACATTTAGTTACAACAAAAACTCATGGAATATTAAATTTTAA

Protein sequence

MSCTWKDIGTRECFFRLEHDAEAMDLIGSKTHHNSETRSGRSNFSFSQHLNATRANCSARSCGQSPADESKTTTMLSFSIAHFTSFTIPGDISSNANPCLPWKWAIVIFAGKLFGPTSPIPTEQSSNHTTFSYNKNSWNIKF
Homology
[Close]
BLAST of MELO3C031819.2 vs. TrEMBL
Match: tr|A0A0D9XH10|A0A0D9XH10_9ORYZ (Uncharacterized protein OS=Leersia perrieri OX=77586 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-04
Identity = 38/77 (49.35%), Postives = 40/77 (51.95%), Query Frame = 0 

Query: 27  IGSKTHHNSETRSGRSNFSFSQHLNATRANCSARSCGQSPADESKTTTMLSFSIAHFTSF 86
           +GS T   S+ RSGR     SQHL  TRANCSA   G SPADES       FS A  TSF
Sbjct: 8   MGSSTVQTSDCRSGRFFLLISQHLRPTRANCSACIRGHSPADESNIACKQPFSTARCTSF 67

Query: 87  TIPGDISSNANPCLPWK 104
             P       NP LP K
Sbjct: 68  KRP-------NPDLPVK 77

[Close]
BLAST of MELO3C031819.2 vs. TrEMBL
Match: tr|A0A0D9XH11|A0A0D9XH11_9ORYZ (Uncharacterized protein OS=Leersia perrieri OX=77586 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-04
Identity = 38/77 (49.35%), Postives = 40/77 (51.95%), Query Frame = 0 

Query: 27  IGSKTHHNSETRSGRSNFSFSQHLNATRANCSARSCGQSPADESKTTTMLSFSIAHFTSF 86
           +GS T   S+ RSGR     SQHL  TRANCSA   G SPADES       FS A  TSF
Sbjct: 8   MGSSTVQTSDCRSGRFFLLISQHLRPTRANCSACIRGHSPADESNIACKQPFSTARCTSF 67

Query: 87  TIPGDISSNANPCLPWK 104
             P       NP LP K
Sbjct: 68  KRP-------NPDLPVK 77

The following BLAST results are available for this feature:
BLAST of MELO3C031819.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031819.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031819.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031819.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0D9XH10|A0A0D9XH10_9ORYZ2.6e-0449.35Uncharacterized protein OS=Leersia perrieri OX=77586 PE=4 SV=1[more]
tr|A0A0D9XH11|A0A0D9XH11_9ORYZ2.6e-0449.35Uncharacterized protein OS=Leersia perrieri OX=77586 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031819.2.1MELO3C031819.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031819.2Cucumber (Chinese Long) v3cucmedB230
MELO3C031819.2Cucumber (Chinese Long) v3cucmedB253
MELO3C031819.2Cucumber (Chinese Long) v3cucmedB407
MELO3C031819.2Watermelon (97103) v2medwmbB423
MELO3C031819.2Watermelon (97103) v2medwmbB436
MELO3C031819.2Wax gourdmedwgoB543
MELO3C031819.2Cucumber (Gy14) v2cgybmedB201
MELO3C031819.2Cucumber (Gy14) v1cgymedB142
MELO3C031819.2Cucumber (Gy14) v1cgymedB431
MELO3C031819.2Cucumber (Gy14) v1cgymedB496
MELO3C031819.2Cucurbita maxima (Rimu)cmamedB344
MELO3C031819.2Cucurbita maxima (Rimu)cmamedB432
MELO3C031819.2Cucurbita maxima (Rimu)cmamedB661
MELO3C031819.2Cucurbita moschata (Rifu)cmomedB331
MELO3C031819.2Cucurbita moschata (Rifu)cmomedB421
MELO3C031819.2Cucurbita moschata (Rifu)cmomedB649
MELO3C031819.2Cucurbita moschata (Rifu)cmomedB944
MELO3C031819.2Cucurbita pepo (Zucchini)cpemedB050
MELO3C031819.2Cucurbita pepo (Zucchini)cpemedB233
MELO3C031819.2Cucurbita pepo (Zucchini)cpemedB835
MELO3C031819.2Wild cucumber (PI 183967)cpimedB224
MELO3C031819.2Wild cucumber (PI 183967)cpimedB246
MELO3C031819.2Cucumber (Chinese Long) v2cumedB223
MELO3C031819.2Cucumber (Chinese Long) v2cumedB245
MELO3C031819.2Melon (DHL92) v3.6.1medmedB148
MELO3C031819.2Bottle gourd (USVL1VR-Ls)lsimedB397
MELO3C031819.2Watermelon (Charleston Gray)medwcgB416
MELO3C031819.2Watermelon (97103) v1medwmB447
MELO3C031819.2Silver-seed gourdcarmedB0722
MELO3C031819.2Silver-seed gourdcarmedB0743
MELO3C031819.2Silver-seed gourdcarmedB0975