MELO3C031790.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C031790.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionserine/threonine-protein phosphatase 7 long form homolog
Locationchr06 : 19847266 .. 19848085 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTGTTCATTTAGTGATGCGATGGCTAAATCATAGAAGGTTTACTGCTAAGGGACCTCCAATTGAGCAATTTAATATGGATATAACTCAAGAATACATCCATTGGTACAAAAACATTACTAGGCCCTATATCACCCAATCAGGAGCTGCTGTAGGTCATCTGGTATACATTTAAATATTGTATAGTTGTTTTTAGTAAAAATTCATTTTGGATACTTTCTAATTCATTTTAATATTTTACAGAGATCGAACAATAGTAGACGTCGAAATGTTGCAGATGATCCACAACAGGTTTTAAGTATATGCAACGATGACGAGCAGTACATGGAGAACATTCACTATATGTATAATGTATCTATTGTACCTGCTCCAGTTTAGAGGAGACGTGCTTTAGTGCAAGAGCTCGATCAATTGGAAGAAGTTGACCAACACGTGAAAGAAGTGTCTCTTGTTACACAGACACAAAGCGAGCATGGTTACGTTAGTCCATCAATGATGATACCGGCATTTGGAATGACATATTATGATTCAGGATTCCGTCAATCCTCAGACTTTGGAATATAATATTATAATTAAGAGGCGGGTCTATCATCATCAAACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGAGTGTAGTCGTGGAAAACATAATGAATATTTGTACTACAAAGTGCTTGCAGCGGTACTTGAGCAATCAAATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAAAGAGTTTATAGTCGACGACGACAACCAGCTGAAAATTGTCGACATC

mRNA sequence

AATTGTTCATTTAGTGATGCGATGGCTAAATCATAGAAGGTTTACTGCTAAGGGACCTCCAATTGAGCAATTTAATATGGATATAACTCAAGAATACATCCATTGGTACAAAAACATTACTAGGCCCTATATCACCCAATCAGGAGCTGCTGTAGGTCATCTGAGATCGAACAATAGTAGACGTCGAAATGTTGCAGATGATCCACAACAGGTTTTAAGTATATGCAACGATGACGAGCAGTACATGGAGAACATTCACTATATGTATAATGTATCTATTGTACCTGCTCCAGTTTAGAGGAGACGTGCTTTAGTGCAAGAGCTCGATCAATTGGAAGAAGTTGACCAACACGTGAAAGAAGTGTCTCTTGTTACACAGACACAAAGCGAGCATGGTTACGTTAGTCCATCAATGATGATACCGGCATTTGGAATGACATATTATGATTCAGGATTCCGTCAATCCTCAGACTTTGGAATATAATATTATAATTAAGAGGCGGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGAGTGTAGTCGTGGAAAACATAATGAATATTTGTACTACAAAGTGCTTGCAGCGGTACTTGAGCAATCAAATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAAAGAGTTTATAGTCGACGACGACAACCAGCTGAAAATTGTCGACATC

Coding sequence (CDS)

ATGCGATGGCTAAATCATAGAAGGTTTACTGCTAAGGGACCTCCAATTGAGCAATTTAATATGGATATAACTCAAGAATACATCCATTGGTACAAAAACATTACTAGGCCCTATATCACCCAATCAGGAGCTGCTGTAGGTCATCTGAGATCGAACAATAGTAGACGTCGAAATGTTGCAGATGATCCACAACAGGTTTTAAGTATATGCAACGATGACGAGCAGTACATGGAGAACATTCACTATATGTATAATGTATCTATTGTACCTGCTCCAGTTTAG

Protein sequence

MRWLNHRRFTAKGPPIEQFNMDITQEYIHWYKNITRPYITQSGAAVGHLRSNNSRRRNVADDPQQVLSICNDDEQYMENIHYMYNVSIVPAPV
BLAST of MELO3C031790.2 vs. NCBI nr
Match: XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo])

HSP 1 Score: 167.2 bits (422), Expect = 2.7e-38
Identity = 75/93 (80.65%), Postives = 85/93 (91.40%), Query Frame = 0

Query: 1  MRWLNHRRFTAKGPPIEQFNMDITQEYIHWYKNITRPYITQSGAAVGHLRSNNSRRRNVA 60
          MRW N RRFTA GPPIEQF+MD+TQEYIHWYKNI++ YITQ GAA+ HLRSNN+R RN+A
Sbjct: 1  MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 61 DDPQQVLSICNDDEQYMENIHYMYNVSIVPAPV 94
          DDPQQVL+ICND+EQYMENIHYMY+V IVPAPV
Sbjct: 61 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPV 93

BLAST of MELO3C031790.2 vs. NCBI nr
Match: XP_016900498.1 (PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 9.7e-28
Identity = 59/73 (80.82%), Postives = 68/73 (93.15%), Query Frame = 0

Query: 21 MDITQEYIHWYKNITRPYITQSGAAVGHLRSNNSRRRNVADDPQQVLSICNDDEQYMENI 80
          MD+TQEYIHWYKNI++ YITQ GAA+ HLRSNN+R RN+ADDPQQVL+ICND+EQYMENI
Sbjct: 1  MDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIADDPQQVLNICNDNEQYMENI 60

Query: 81 HYMYNVSIVPAPV 94
          HYMY+V IVPAPV
Sbjct: 61 HYMYDVPIVPAPV 73

BLAST of MELO3C031790.2 vs. NCBI nr
Match: XP_008463092.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo])

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26
Identity = 58/74 (78.38%), Postives = 66/74 (89.19%), Query Frame = 0

Query: 1   MRWLNHRRFTAKGPPIEQFNMDITQEYIHWYKNITRPYITQSGAAVGHLRSNNSRRRNVA 60
           MRW N RRFTA GPPIEQF+MD+TQEYI+WYKNI++ YITQ GAA+ HLRSNN R RNVA
Sbjct: 92  MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 151

Query: 61  DDPQQVLSICNDDE 75
           DDPQQVL+ICND+E
Sbjct: 152 DDPQQVLNICNDNE 165

BLAST of MELO3C031790.2 vs. NCBI nr
Match: XP_008461670.1 (PREDICTED: CASP-like protein 4C1 isoform X1 [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-10
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 50  RSNNSRRRNVADDPQQVLSICNDDEQYMENIHYMYNVSIVPAPV 94
           RS N R +NVADDPQQVL+ICND+EQYMENIHYMYNV IVPA V
Sbjct: 162 RSKNIRLQNVADDPQQVLNICNDNEQYMENIHYMYNVLIVPALV 205

BLAST of MELO3C031790.2 vs. NCBI nr
Match: XP_008461671.1 (PREDICTED: CASP-like protein 4C1 isoform X2 [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-10
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 50  RSNNSRRRNVADDPQQVLSICNDDEQYMENIHYMYNVSIVPAPV 94
           RS N R +NVADDPQQVL+ICND+EQYMENIHYMYNV IVPA V
Sbjct: 155 RSKNIRLQNVADDPQQVLNICNDNEQYMENIHYMYNVLIVPALV 198

BLAST of MELO3C031790.2 vs. TrEMBL
Match: tr|A0A1S3BLK4|A0A1S3BLK4_CUCME (mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-38
Identity = 75/93 (80.65%), Postives = 85/93 (91.40%), Query Frame = 0

Query: 1  MRWLNHRRFTAKGPPIEQFNMDITQEYIHWYKNITRPYITQSGAAVGHLRSNNSRRRNVA 60
          MRW N RRFTA GPPIEQF+MD+TQEYIHWYKNI++ YITQ GAA+ HLRSNN+R RN+A
Sbjct: 1  MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 61 DDPQQVLSICNDDEQYMENIHYMYNVSIVPAPV 94
          DDPQQVL+ICND+EQYMENIHYMY+V IVPAPV
Sbjct: 61 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPV 93

BLAST of MELO3C031790.2 vs. TrEMBL
Match: tr|A0A1S4DWZ9|A0A1S4DWZ9_CUCME (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.4e-28
Identity = 59/73 (80.82%), Postives = 68/73 (93.15%), Query Frame = 0

Query: 21 MDITQEYIHWYKNITRPYITQSGAAVGHLRSNNSRRRNVADDPQQVLSICNDDEQYMENI 80
          MD+TQEYIHWYKNI++ YITQ GAA+ HLRSNN+R RN+ADDPQQVL+ICND+EQYMENI
Sbjct: 1  MDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIADDPQQVLNICNDNEQYMENI 60

Query: 81 HYMYNVSIVPAPV 94
          HYMY+V IVPAPV
Sbjct: 61 HYMYDVPIVPAPV 73

BLAST of MELO3C031790.2 vs. TrEMBL
Match: tr|A0A1S3CIU3|A0A1S3CIU3_CUCME (serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656 GN=LOC103501325 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.3e-27
Identity = 58/74 (78.38%), Postives = 66/74 (89.19%), Query Frame = 0

Query: 1   MRWLNHRRFTAKGPPIEQFNMDITQEYIHWYKNITRPYITQSGAAVGHLRSNNSRRRNVA 60
           MRW N RRFTA GPPIEQF+MD+TQEYI+WYKNI++ YITQ GAA+ HLRSNN R RNVA
Sbjct: 92  MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 151

Query: 61  DDPQQVLSICNDDE 75
           DDPQQVL+ICND+E
Sbjct: 152 DDPQQVLNICNDNE 165

BLAST of MELO3C031790.2 vs. TrEMBL
Match: tr|A0A1S3CF98|A0A1S3CF98_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500218 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-11
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 50  RSNNSRRRNVADDPQQVLSICNDDEQYMENIHYMYNVSIVPAPV 94
           RS N R +NVADDPQQVL+ICND+EQYMENIHYMYNV IVPA V
Sbjct: 155 RSKNIRLQNVADDPQQVLNICNDNEQYMENIHYMYNVLIVPALV 198

BLAST of MELO3C031790.2 vs. TrEMBL
Match: tr|A0A1S3CF42|A0A1S3CF42_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500218 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-11
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 50  RSNNSRRRNVADDPQQVLSICNDDEQYMENIHYMYNVSIVPAPV 94
           RS N R +NVADDPQQVL+ICND+EQYMENIHYMYNV IVPA V
Sbjct: 162 RSKNIRLQNVADDPQQVLNICNDNEQYMENIHYMYNVLIVPALV 205

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008449513.12.7e-3880.65PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X... [more]
XP_016900498.19.7e-2880.82PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumi... [more]
XP_008463092.11.4e-2678.38PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis mel... [more]
XP_008461670.11.4e-1081.82PREDICTED: CASP-like protein 4C1 isoform X1 [Cucumis melo][more]
XP_008461671.11.4e-1081.82PREDICTED: CASP-like protein 4C1 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BLK4|A0A1S3BLK4_CUCME1.8e-3880.65mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
tr|A0A1S4DWZ9|A0A1S4DWZ9_CUCME6.4e-2880.82GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo OX... [more]
tr|A0A1S3CIU3|A0A1S3CIU3_CUCME9.3e-2778.38serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656... [more]
tr|A0A1S3CF98|A0A1S3CF98_CUCME9.3e-1181.82CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500218 PE=3 SV=1[more]
tr|A0A1S3CF42|A0A1S3CF42_CUCME9.3e-1181.82CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500218 PE=3 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031790.2.1MELO3C031790.2.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None