MELO3C031785.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031785.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 6453558 .. 6453818 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGAGAAAGGGGGAGCGGGTATAAATATAAGTGGAGTGGTTAACGTAGAACATACTTACCTGGACGGGGTTATTGGGCGATCAAGAAGGCCCATGGCCTGGGTTGGTGGCCTCCATTGCACAATGAGGAGGGGTGCCAGCCTAAGGTCTGCTCAAAGTAGCAGAGCCTACGTCATTATTTGTTGCTGTGGGGGCCTGCGTTCGCGCGGCCCCTACTCAATCCTATCTGTCATTAAAACATTTCTACTAAGGTGA

mRNA sequence

ATGGAAGATGAGAAAGGGGGAGCGGGTATAAATATAAGTGGAGTGGTTAACGTAGAACATACTTACCTGGACGGGGTTATTGGGCGATCAAGAAGGCCCATGGCCTGGGTTGGTGGCCTCCATTGCACAATGAGGAGGGGTGCCAGCCTAAGGTCTGCTCAAAGTAGCAGAGCCTACGTCATTATTTGTTGCTGTGGGGGCCTGCGTTCGCGCGGCCCCTACTCAATCCTATCTGTCATTAAAACATTTCTACTAAGGTGA

Coding sequence (CDS)

ATGGAAGATGAGAAAGGGGGAGCGGGTATAAATATAAGTGGAGTGGTTAACGTAGAACATACTTACCTGGACGGGGTTATTGGGCGATCAAGAAGGCCCATGGCCTGGGTTGGTGGCCTCCATTGCACAATGAGGAGGGGTGCCAGCCTAAGGTCTGCTCAAAGTAGCAGAGCCTACGTCATTATTTGTTGCTGTGGGGGCCTGCGTTCGCGCGGCCCCTACTCAATCCTATCTGTCATTAAAACATTTCTACTAAGGTGA

Protein sequence

MEDEKGGAGINISGVVNVEHTYLDGVIGRSRRPMAWVGGLHCTMRRGASLRSAQSSRAYVIICCCGGLRSRGPYSILSVIKTFLLR
Homology
[Close]
BLAST of MELO3C031785.2 vs. NCBI nr
Match: OEL21690.1 (hypothetical protein BAE44_0017291, partial [Dichanthelium oligosanthes])

HSP 1 Score: 59.7 bits (143), Expect = 5.7e-06
Identity = 32/54 (59.26%), Postives = 37/54 (68.52%), Query Frame = 0 

Query: 20 HTYLDGVIGRSRRPMAWVGGLHCTMRRGASLRSAQSSRAYVIICCCGGLRSRGP 74
          HTYLDGV GRSR+P+A V G HCT+ +   L  + S R  VIIC  GG RSRGP
Sbjct: 3  HTYLDGVDGRSRKPVALVSGSHCTL-QVRWLTISPSGRVDVIICDRGGTRSRGP 55

[Close]
BLAST of MELO3C031785.2 vs. NCBI nr
Match: OAY46251.1 (hypothetical protein MANES_07G129200 [Manihot esculenta])

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04
Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 44 MRRGASLRSAQSSRAYVIICCCGGLRSRGPY 75
          +RRGA LRS Q  RAYVIICC GGLRSRGPY
Sbjct: 17 LRRGAGLRSPQVGRAYVIICCRGGLRSRGPY 47

[Close]
BLAST of MELO3C031785.2 vs. NCBI nr
Match: OAY46252.1 (hypothetical protein MANES_07G129300 [Manihot esculenta])

HSP 1 Score: 53.5 bits (127), Expect = 4.1e-04
Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 44 MRRGASLRSAQSSRAYVIICCCGGLRSRGPY 75
          +RRGA LRS Q  RAYVIICC GGLRSRGPY
Sbjct: 17 LRRGAVLRSPQVGRAYVIICCRGGLRSRGPY 47

[Close]
BLAST of MELO3C031785.2 vs. TrEMBL
Match: tr|A0A1E5V949|A0A1E5V949_9POAL (Uncharacterized protein (Fragment) OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017291 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-06
Identity = 32/54 (59.26%), Postives = 37/54 (68.52%), Query Frame = 0 

Query: 20 HTYLDGVIGRSRRPMAWVGGLHCTMRRGASLRSAQSSRAYVIICCCGGLRSRGP 74
          HTYLDGV GRSR+P+A V G HCT+ +   L  + S R  VIIC  GG RSRGP
Sbjct: 3  HTYLDGVDGRSRKPVALVSGSHCTL-QVRWLTISPSGRVDVIICDRGGTRSRGP 55

[Close]
BLAST of MELO3C031785.2 vs. TrEMBL
Match: tr|A0A1D5ZBD7|A0A1D5ZBD7_WHEAT (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.4e-06
Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 20 HTYLDGVIGRSRRPMAWVGGLHCT-MRRGASLRSAQSSRAYVIICCCGGLRSRGP 74
          HTYLDGV GRS RP+AWV G HCT   R  ++  + S R  VIIC  GG RSRGP
Sbjct: 46 HTYLDGVDGRSIRPVAWVSGPHCTWWVRWPTI--SPSGRVDVIICGRGGTRSRGP 98

[Close]
BLAST of MELO3C031785.2 vs. TrEMBL
Match: tr|A0A2C9VME8|A0A2C9VME8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G129200 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-04
Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 44 MRRGASLRSAQSSRAYVIICCCGGLRSRGPY 75
          +RRGA LRS Q  RAYVIICC GGLRSRGPY
Sbjct: 17 LRRGAGLRSPQVGRAYVIICCRGGLRSRGPY 47

[Close]
BLAST of MELO3C031785.2 vs. TrEMBL
Match: tr|A0A2C9VMJ3|A0A2C9VMJ3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G129300 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.7e-04
Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 44 MRRGASLRSAQSSRAYVIICCCGGLRSRGPY 75
          +RRGA LRS Q  RAYVIICC GGLRSRGPY
Sbjct: 17 LRRGAVLRSPQVGRAYVIICCRGGLRSRGPY 47

The following BLAST results are available for this feature:
BLAST of MELO3C031785.2 vs. NCBI nr
Match NameE-valueIdentityDescription
OEL21690.15.7e-0659.26hypothetical protein BAE44_0017291, partial [Dichanthelium oligosanthes][more]
OAY46251.12.4e-0480.65hypothetical protein MANES_07G129200 [Manihot esculenta][more]
OAY46252.14.1e-0480.65hypothetical protein MANES_07G129300 [Manihot esculenta][more]
BLAST of MELO3C031785.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031785.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031785.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1E5V949|A0A1E5V949_9POAL3.7e-0659.26Uncharacterized protein (Fragment) OS=Dichanthelium oligosanthes OX=888268 GN=BA... [more]
tr|A0A1D5ZBD7|A0A1D5ZBD7_WHEAT6.4e-0660.00Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1[more]
tr|A0A2C9VME8|A0A2C9VME8_MANES1.6e-0480.65Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G129200 PE=4 SV=... [more]
tr|A0A2C9VMJ3|A0A2C9VMJ3_MANES2.7e-0480.65Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G129300 PE=4 SV=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031785.2.1MELO3C031785.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031785.2Silver-seed gourdcarmedB0385
MELO3C031785.2Silver-seed gourdcarmedB0869
MELO3C031785.2Silver-seed gourdcarmedB0918
MELO3C031785.2Cucumber (Chinese Long) v3cucmedB230
MELO3C031785.2Cucumber (Chinese Long) v3cucmedB407
MELO3C031785.2Watermelon (97103) v2medwmbB412
MELO3C031785.2Watermelon (97103) v2medwmbB423
MELO3C031785.2Wax gourdmedwgoB530
MELO3C031785.2Cucumber (Gy14) v2cgybmedB201
MELO3C031785.2Cucumber (Gy14) v2cgybmedB353
MELO3C031785.2Cucumber (Gy14) v1cgymedB432
MELO3C031785.2Cucumber (Gy14) v1cgymedB496
MELO3C031785.2Cucurbita maxima (Rimu)cmamedB320
MELO3C031785.2Cucurbita maxima (Rimu)cmamedB344
MELO3C031785.2Cucurbita maxima (Rimu)cmamedB661
MELO3C031785.2Cucurbita maxima (Rimu)cmamedB665
MELO3C031785.2Cucurbita maxima (Rimu)cmamedB779
MELO3C031785.2Cucurbita maxima (Rimu)cmamedB954
MELO3C031785.2Cucurbita moschata (Rifu)cmomedB305
MELO3C031785.2Cucurbita moschata (Rifu)cmomedB331
MELO3C031785.2Cucurbita moschata (Rifu)cmomedB649
MELO3C031785.2Cucurbita moschata (Rifu)cmomedB654
MELO3C031785.2Cucurbita moschata (Rifu)cmomedB777
MELO3C031785.2Cucurbita moschata (Rifu)cmomedB944
MELO3C031785.2Cucurbita pepo (Zucchini)cpemedB212
MELO3C031785.2Cucurbita pepo (Zucchini)cpemedB233
MELO3C031785.2Cucurbita pepo (Zucchini)cpemedB483
MELO3C031785.2Cucurbita pepo (Zucchini)cpemedB831
MELO3C031785.2Cucurbita pepo (Zucchini)cpemedB835
MELO3C031785.2Wild cucumber (PI 183967)cpimedB224
MELO3C031785.2Wild cucumber (PI 183967)cpimedB399
MELO3C031785.2Cucumber (Chinese Long) v2cumedB223
MELO3C031785.2Cucumber (Chinese Long) v2cumedB391
MELO3C031785.2Melon (DHL92) v3.6.1medmedB013
MELO3C031785.2Bottle gourd (USVL1VR-Ls)lsimedB036
MELO3C031785.2Bottle gourd (USVL1VR-Ls)lsimedB397
MELO3C031785.2Watermelon (Charleston Gray)medwcgB408
MELO3C031785.2Watermelon (Charleston Gray)medwcgB416
MELO3C031785.2Watermelon (97103) v1medwmB447
MELO3C031785.2Watermelon (97103) v1medwmB467