MELO3C031779.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031779.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 6219906 .. 6222044 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTTTTGTTTAAGTAGGCTATATATATATAATGAGGTCTCTTCTCCATATATATTTGACAAAGAAATAATAGCAAACAAATTGAAGATCTCTAGGGTAGCATCCCCATGGTTTTTAAAAATTAACAAAATCAAATAATACTAAGTCAACTTGGATTAAATATATATATGTACATGTGAGTGTGTAGTTGGAACCACTTGATGCTCTAAAATGTTAGTATTGAATGTTAAAATTTTATGAAAATATTGATAAAGTGTTGATGTATCAAAATTTTATATTATATCAATGGTAGATATTATTAATGAATCAGTGGCATTTGGTGGACATCAATCATTATTCTGTGTGATAGAATATAAAATTTTGCTTAAAAGTTTTTCCATTTACATCGATTTTCATAAATAAACACATTTCAAACTCTTATTAAATAAGGTTAAATCGTAATTTCCAAGATTCTATGGATGTATTTCATCGTTTTTTTAGTAGAAGACAAACTAGAAGATCTCTTGGGTAGCATCACTATGGATTTCAAAAAATTAATAAAAATAAAATCCTCAAGAATCCTTTAGATCAACTTGGATAGACGTAAATATATTCATGTGAGAGTGTAGTGGACACCAAGATTTAAAGAAAAAAAAAAAATTAAAGCCTCAATTAAAAAAATACTATCATAGAAATATCAATAAAATGGCATTATTTCAAGTGACATTATCTAACTTATTATTAGTCAAAACACGTTTAACTACGAAGTTTGAATGGAAAATCTAATGTGTTAGGTTGGCATGATCACTCCAAAACCAAATTTTCTTTTGGTAGGTTCAACATTATTTTTTTATTTTCCCCATTTTTTTTTTGTAGCAATTCCAAAATCAAATTTGAAAGAGTTCAATATACAATACCTCCGCTTCCCTTCTCCAATATTACAACAACCACCCATTTCATCAAACCTTTATTAGCATTGATGTTAGCATTTATCGATCAAAGACTACTAAAGTTGAATTGATAGCAAGCCCATTTATAAGGAGACTCGGTCTTTGTAATTAAAATAGAAATGCCAATTTTTCTTTTCTTTCTTTTGGTTCAGAAAGAAATACAAAAATTTATAGGAACATTAATAAGCAAACTGTTATGTAGAAGTTAAACACTCAGACATAATAAGGTCTTAGCTTCTCAGGAATATCCATGTCAGTTTTCTCCTTATAGGGTCGACTATGCATAATAAAGTCTACGAAGTATTAAAGTCTGCATCTCTATCGATCTATAACTTTCTTAACTTCTGTTGACCGATGTTGGGGAATTTGCCTATGAATTGAACATCAATATTCTAAACGTTGCTTGAACTTAATTGATATTTAATGTCTTGTTAGTGTGTTGTCATACTAAGTAAAATATCTGTTGTCAGGATATGACACGTTAGCTATTGGAAAAATAACCCTAAACACTTCAAGCTCCATCGCCTAATTGAAGTTGTAACAAAGTTTGGTTTGGGTTGTTTATTTATAAACGCCACCAACATTATCTATATATTCAAAACATTATTTCAGCTTTAAATCTACAACCACAAATGGTTTTTTCCATAACAGCTTTCATTGCTAAGGTTGTTGTCATCTTTGCTTTGCTGCTTCATGTGTCGTTCAATGTTTCTGCGATGAACGTCGTCGAAACCAATAGAGCTGCTCGGATAGCTAGTAAGTTTTCAGCTTTCAATTATCACTCAACTCGTAAGCTTGTTAATAAGCATATAGTTTACATAATAAGAATGATCTATAATCTTTTATTCGTCGTATTTTAATATTACCCTGAGTTTGGAATTCGAATACAGAACTTTATGTTCATTCAATAACCTCTGAAACATAAACTTTAAGTAGAAGCTAGGGTTGTTCATCGGTCCATCGAGGTTGGTTTTTGGCTAAAACTGATACACCGACCCCACTGATTTGTTGGTTTAGAGATTCGTTGGGTGGTAGTCAAAATTTGTGAGGGCCAATGGAGTGTCCAACCGACTACACAAATGATCTTTTGGGAAGGATCTCTTTATTGGAGCCACACTAAGATGAAAAGATCCAATATAGTTCGTAGTGGCGTTGGTCGGTTGGTGACCGGAAAGAAAACACCAAGAAGAGAGAAGAGAATCTAG

mRNA sequence

TTTTTTTTTTTTGTTTAAGTAGGCTATATATATATAATGAGGTCTCTTCTCCATATATATTTGACAAAGAAATAATAGCAAACAAATTGAAGATCTCTAGGGTAGCATCCCCATGGTTTTTAAAAATTAACAAAATCAAATAATACTAAGTCAACTTGGATTAAATATATATATGTACATGTGAGTGTGTAGTTGGAACCACTTGATGCTCTAAAATGTTAGTATTGAATGTTAAAATTTTATGAAAATATTGATAAAGTGTTGATGTATCAAAATTTTATATTATATCAATGGTAGATATTATTAATGAATCAGTGGCATTTGGTGGACATCAATCATTATTCTGTGTGATAGAATATAAAATTTTGCTTAAAAGTTTTTCCATTTACATCGATTTTCATAAATAAACACATTTCAAACTCTTATTAAATAAGGTTAAATCGTAATTTCCAAGATTCTATGGATGTATTTCATCGTTTTTTTAGTAGAAGACAAACTAGAAGATCTCTTGGGTAGCATCACTATGGATTTCAAAAAATTAATAAAAATAAAATCCTCAAGAATCCTTTAGATCAACTTGGATAGACGTAAATATATTCATGTGAGAGTGTAGTGGACACCAAGATTTAAAGAAAAAAAAAAAATTAAAGCCTCAATTAAAAAAATACTATCATAGAAATATCAATAAAATGGCATTATTTCAAGTGACATTATCTAACTTATTATTAGTCAAAACACGTTTAACTACGAAGTTTGAATGGAAAATCTAATGTGTTAGGTTGGCATGATCACTCCAAAACCAAATTTTCTTTTGGTAGGTTCAACATTATTTTTTTATTTTCCCCATTTTTTTTTTGTAGCAATTCCAAAATCAAATTTGAAAGAGTTCAATATACAATACCTCCGCTTCCCTTCTCCAATATTACAACAACCACCCATTTCATCAAACCTTTATTAGCATTGATGTTAGCATTTATCGATCAAAGACTACTAAAGTTGAATTGATAGCAAGCCCATTTATAAGGAGACTCGGTCTTTGTAATTAAAATAGAAATGCCAATTTTTCTTTTCTTTCTTTTGGTTCAGAAAGAAATACAAAAATTTATAGGAACATTAATAAGCAAACTGTTATGTAGAAGTTAAACACTCAGACATAATAAGGTCTTAGCTTCTCAGGAATATCCATGTCAGTTTTCTCCTTATAGGGTCGACTATGCATAATAAAGTCTACGAAGTATTAAAGTCTGCATCTCTATCGATCTATAACTTTCTTAACTTCTGTTGACCGATGTTGGGGAATTTGCCTATGAATTGAACATCAATATTCTAAACGTTGCTTGAACTTAATTGATATTTAATGTCTTGTTAGTGTGTTGTCATACTAAGTAAAATATCTGTTGTCAGGATATGACACGTTAGCTATTGGAAAAATAACCCTAAACACTTCAAGCTCCATCGCCTAATTGAAGTTGTAACAAAGTTTGGTTTGGGTTGTTTATTTATAAACGCCACCAACATTATCTATATATTCAAAACATTATTTCAGCTTTAAATCTACAACCACAAATGGTTTTTTCCATAACAGCTTTCATTGCTAAGGTTGTTGTCATCTTTGCTTTGCTGCTTCATGTGTCGTTCAATGTTTCTGCGATGAACGTCGTCGAAACCAATAGAGCTGCTCGGATAGCTATCAAAATTTGTGAGGGCCAATGGAGTGTCCAACCGACTACACAAATGATCTTTTGGGAAGGATCTCTTTATTGGAGCCACACTAAGATGAAAAGATCCAATATAGTTCGTAGTGGCGTTGGTCGGTTGGTGACCGGAAAGAAAACACCAAGAAGAGAGAAGAGAATCTAG

Coding sequence (CDS)

ATGGTTTTTTCCATAACAGCTTTCATTGCTAAGGTTGTTGTCATCTTTGCTTTGCTGCTTCATGTGTCGTTCAATGTTTCTGCGATGAACGTCGTCGAAACCAATAGAGCTGCTCGGATAGCTATCAAAATTTGTGAGGGCCAATGGAGTGTCCAACCGACTACACAAATGATCTTTTGGGAAGGATCTCTTTATTGGAGCCACACTAAGATGAAAAGATCCAATATAGTTCGTAGTGGCGTTGGTCGGTTGGTGACCGGAAAGAAAACACCAAGAAGAGAGAAGAGAATCTAG

Protein sequence

MVFSITAFIAKVVVIFALLLHVSFNVSAMNVVETNRAARIAIKICEGQWSVQPTTQMIFWEGSLYWSHTKMKRSNIVRSGVGRLVTGKKTPRREKRI
Homology
[Close]
BLAST of MELO3C031779.2 vs. NCBI nr
Match: KGN57257.1 (hypothetical protein Csa_3G175580 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 4.6e-04
Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 1  MVFSITAFIAKVVVIFALLLHVSFNVSAMN-VVETNRAARIAIK 44
          MVFSITAFI K VVIFALLL VSFNVSAMN +VETN+AARIA K
Sbjct: 1  MVFSITAFIPK-VVIFALLLLVSFNVSAMNQLVETNKAARIASK 43

[Close]
BLAST of MELO3C031779.2 vs. TrEMBL
Match: tr|A0A0A0L9E5|A0A0A0L9E5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175580 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.0e-04
Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 1  MVFSITAFIAKVVVIFALLLHVSFNVSAMN-VVETNRAARIAIK 44
          MVFSITAFI K VVIFALLL VSFNVSAMN +VETN+AARIA K
Sbjct: 1  MVFSITAFIPK-VVIFALLLLVSFNVSAMNQLVETNKAARIASK 43

The following BLAST results are available for this feature:
BLAST of MELO3C031779.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57257.14.6e-0484.09hypothetical protein Csa_3G175580 [Cucumis sativus][more]
BLAST of MELO3C031779.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031779.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031779.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9E5|A0A0A0L9E5_CUCSA3.0e-0484.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175580 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031779.2.1MELO3C031779.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C031779.2CsaV3_3G016050Cucumber (Chinese Long) v3cucmedB230
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031779.2Silver-seed gourdcarmedB0385
MELO3C031779.2Silver-seed gourdcarmedB0869
MELO3C031779.2Watermelon (97103) v2medwmbB423
MELO3C031779.2Wax gourdmedwgoB530
MELO3C031779.2Cucumber (Gy14) v2cgybmedB201
MELO3C031779.2Cucumber (Gy14) v1cgymedB432
MELO3C031779.2Cucurbita maxima (Rimu)cmamedB344
MELO3C031779.2Cucurbita maxima (Rimu)cmamedB779
MELO3C031779.2Cucurbita moschata (Rifu)cmomedB331
MELO3C031779.2Cucurbita moschata (Rifu)cmomedB777
MELO3C031779.2Cucurbita pepo (Zucchini)cpemedB233
MELO3C031779.2Cucurbita pepo (Zucchini)cpemedB483
MELO3C031779.2Wild cucumber (PI 183967)cpimedB224
MELO3C031779.2Cucumber (Chinese Long) v2cumedB223
MELO3C031779.2Bottle gourd (USVL1VR-Ls)lsimedB397
MELO3C031779.2Watermelon (Charleston Gray)medwcgB416
MELO3C031779.2Watermelon (97103) v1medwmB447