MELO3C031774.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031774.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Transmembrane protein, putative
Location	chr06 : 5938782 .. 5939667 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAACAAACACTTCTTGGAGTCCTAACTGTGTTCACGTTAGCCCAACGCCAGATGTTACTAACGTTGGAGTTACTAATGAACAACAATAAGCGTCTCCCACATACACCGTCCAATACACGTCATAGAATTAGGCAGCTTATGTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGACAGAGCACGCGGATGGACAAGCAAACATTCGCAATTCTATGCCATTTACTAAGAAATTTGCCTGGTCTTTCATCGACTAAGATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCTCATGACTTGAAGAACCGTGTAATTCAACGAAAATTTGTACGATTCAGTGAGACAGTATCTCAACATTTTAACCTTGTATTGTTGGCTATGGTTCGACTGTACGAGGAGTTGATAAAGAGACTTGTTCCAGTAACAAACAACTGCAATGATCAACATTGGAAGTGTTTCGAGGTGGGCATGGTAAAAGTTCACTGTATTTGACCTTTACATACGTCACACTTATTTCAGCATGTTTATTTAAACCTACAGAATTACCTTGACGCGTTAGACGGGACGTACATAAACGTCAACGTCCCTGTAGGAGATCGACCTACATTCAGAACACGTAAGGAAAAGATTGTCACAAATGTACTGGGCGTGTGCGACACGAAAGGAGATTTCGTATATGTCATTGCCGGTTGAGAATGATCCGCGGCAGACTCGCAGATTCTACAGGATGCCCTAGCATGAGAAAATGGACTACAAGTGCCAAAGGGTATTTCTTATTTATAATAAAAATACGTCGATTTCTATTTACATATTCAAAGCACATAAACAAATGGTTTAAATAACATGATATTATTATCTGTGC

mRNA sequence

ATGGATCAACAAACACTTCTTGGAGTCCTAACTGTGTTCACGTTAGCCCAACGCCAGATGTTACTAACGTTGGAGTTACTAATGAACAACAATAAGCGTCTCCCACATACACCGTCCAATACACGTCATAGAATTAGGCAGCTTATGTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGACAGAGCACGCGGATGGACAAGCAAACATTCGCAATTCTATGCCATTTACTAAGAAATTTGCCTGGTCTTTCATCGACTAAGATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCTCATGACTTGAAGAACCGTGTAATTCAACGAAAATTTGTACGATTCAGTGAGACAGTATCTCAACATTTTAACCTTGTATTGTTGGCTATGGTTCGACTGTACGAGGAGTTGATAAAGAGACTTGTTCCAGTAACAAACAACTGCAATGATCAACATTGGAAGTGTTTCGAGGTGGGCATGAATTACCTTGACGCGTTAGACGGGACGTACATAAACGTCAACGTCCCTGTAGGAGATCGACCTACATTCAGAACACGTAAGGAAAAGATTGTCACAAATGTACTGGGCGTGTGCGACACGAAAGGAGATTTCGTATATGTCATTGCCGGTTGAGAATGATCCGCGGCAGACTCGCAGATTCTACAGGATGCCCTAGCATGAGAAAATGGACTACAAGTGCCAAAGGGTATTTCTTATTTATAATAAAAATACGTCGATTTCTATTTACATATTCAAAGCACATAAACAAATGGTTTAAATAACATGATATTATTATCTGTGC

Coding sequence (CDS)

ATGGATCAACAAACACTTCTTGGAGTCCTAACTGTGTTCACGTTAGCCCAACGCCAGATGTTACTAACGTTGGAGTTACTAATGAACAACAATAAGCGTCTCCCACATACACCGTCCAATACACGTCATAGAATTAGGCAGCTTATGTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGACAGAGCACGCGGATGGACAAGCAAACATTCGCAATTCTATGCCATTTACTAAGAAATTTGCCTGGTCTTTCATCGACTAAGATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCTCATGACTTGAAGAACCGTGTAATTCAACGAAAATTTGTACGATTCAGTGAGACAGTATCTCAACATTTTAACCTTGTATTGTTGGCTATGGTTCGACTGTACGAGGAGTTGATAAAGAGACTTGTTCCAGTAACAAACAACTGCAATGATCAACATTGGAAGTGTTTCGAGGTGGGCATGAATTACCTTGACGCGTTAGACGGGACGTACATAAACGTCAACGTCCCTGTAGGAGATCGACCTACATTCAGAACACGTAAGGAAAAGATTGTCACAAATGTACTGGGCGTGTGCGACACGAAAGGAGATTTCGTATATGTCATTGCCGGTTGA

Protein sequence

MDQQTLLGVLTVFTLAQRQMLLTLELLMNNNKRLPHTPSNTRHRIRQLMYFRMIHESDLVCRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRVIQRKFVRFSETVSQHFNLVLLAMVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDALDGTYINVNVPVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVIAG

Homology

[Close]

BLAST of MELO3C031774.2 vs. NCBI nr
Match: XP_016899496.1 (PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo])

HSP 1 Score: 326.6 bits (836), Expect = 6.2e-86
Identity = 167/215 (77.67%), Postives = 186/215 (86.51%), Query Frame = 0


Query: 1   MDQQTLLGVLTVFTLAQRQMLLTLELLMNNNKRLPHTPSNTRHRIRQLMYFRMIHESDLV 60
           MDQQTLLGVLT FTLAQRQ+LLTLELLMN+N+R+ +TP +T +RIRQL YFRMIHESDLV
Sbjct: 1   MDQQTLLGVLTAFTLAQRQILLTLELLMNDNRRITYTPFDTCNRIRQLAYFRMIHESDLV 60

Query: 61  CRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRVIQRKFVRF 120
           CRQSTRMD++TFAILCHLLR +  LSS +I+DVEEMVAMFLHVLAHD+KN VIQRKFVR 
Sbjct: 61  CRQSTRMDRRTFAILCHLLRTVSVLSSIEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRS 120

Query: 121 SETVSQHFNLVLLAMVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDALDGTYINVNV 180
            ETVS+HFNLVLL +VRLYE+LIKR V VTNNCNDQ WKCFE   N L  LDGTYI V+V
Sbjct: 121 GETVSRHFNLVLLVVVRLYEKLIKRPVSVTNNCNDQRWKCFE---NCLGTLDGTYIKVDV 180

Query: 181 PVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVIAG 216
           P  D PTFR RK +I TNVLGVCDTKGDFVYV+AG
Sbjct: 181 PATDWPTFRMRKGEIATNVLGVCDTKGDFVYVLAG 212

[Close]

BLAST of MELO3C031774.2 vs. NCBI nr
Match: XP_008454692.1 (PREDICTED: uncharacterized protein LOC103495048 [Cucumis melo])

HSP 1 Score: 278.9 bits (712), Expect = 1.5e-71
Identity = 137/213 (64.32%), Postives = 170/213 (79.81%), Query Frame = 0


Query: 1   MDQQTLLGVLTVFTLAQRQMLLTLELLMNNNKRLPHTPSNTRHRIRQLMYFRMIHESDLV 60
           M +  L  ++ VF  +QRQ+LLTLELL N+ KR+ H P   RHRIRQL YFRMIH SDLV
Sbjct: 1   MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRVIQRKFVRF 120
           CRQSTRMD++ FAILCHLLR +  L+ST++VDVEEMVAM+LH+LAHD+KNRVIQR+F+R 
Sbjct: 61  CRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRS 120

Query: 121 SETVSQHFNLVLLAMVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDALDGTYINVNV 180
            E +S+HFN+VLLA++RL+ EL+K+  PV N+C DQ W+ FE   N L ALDGTYI VNV
Sbjct: 121 GEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRWFE---NCLGALDGTYIKVNV 180

Query: 181 PVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVI 214
           P  DR  ++TRK ++ TNVLGVCDTKGDFVYV+
Sbjct: 181 PASDRARYKTRKGEVATNVLGVCDTKGDFVYVL 210

[Close]

BLAST of MELO3C031774.2 vs. NCBI nr
Match: XP_008463581.1 (PREDICTED: uncharacterized protein LOC103501690 [Cucumis melo])

HSP 1 Score: 277.7 bits (709), Expect = 3.3e-71
Identity = 140/205 (68.29%), Postives = 168/205 (81.95%), Query Frame = 0


Query: 15  LAQRQMLLTLELLMNNNKRLPHTPSNTRHRIRQLMYFRMIHESDLVCRQSTRMDKQTFAI 74
           + Q QMLL LE LMN+NKRLP TP NTRHRIRQL YF+MIH+S LVCR+ TR+D++T  I
Sbjct: 1   MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLII 60

Query: 75  LCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRVIQRKFVRFSETVSQHFNLVLLA 134
           LC+LL+ + GLS  +IVDVEEMVAMFL+VL H++KNR+IQ+KFVR  ET S HFNLV+ A
Sbjct: 61  LCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQKFVRSGETDSGHFNLVVFA 120

Query: 135 MVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDA----LDGTYINVNVPVGDRPTFRT 194
           +VRLY+E+IK+ V VTNNC DQHWK FEVG+ +++     LD TYI VNVP  DRPTFRT
Sbjct: 121 VVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRT 180

Query: 195 RKEKIVTNVLGVCDTKGDFVYVIAG 216
           RK +I TNVLGVCDTKGDFVYV+AG
Sbjct: 181 RKGEIATNVLGVCDTKGDFVYVLAG 205

[Close]

BLAST of MELO3C031774.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 273.9 bits (699), Expect = 4.8e-70
Identity = 134/163 (82.21%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 53  MIHESDLVCRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRV 112
           MIHESDLVCRQSTRMD++TFAILCHLLRN+ GLSST+IVDVEEMVAMFLHVLAHD+KNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 113 IQRKFVRFSETVSQHFNLVLLAMVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDALD 172
           IQ++FVR  ETVS+HFN+VLLA++RLYEELIKR VPVT+NCNDQ WKCFE   N L ALD
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---NCLGALD 120

Query: 173 GTYINVNVPVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVIAG 216
           GTYI VNVP GDRPTFRTRK +I TNVLGVCD KGDFVYV+AG
Sbjct: 121 GTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAG 160

[Close]

BLAST of MELO3C031774.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 235.7 bits (600), Expect = 1.4e-58
Identity = 121/215 (56.28%), Postives = 152/215 (70.70%), Query Frame = 0


Query: 1   MDQQTLLGVLTVFTLAQRQMLLTLELLMNNNKRLPHTPSNTRHRIRQLMYFRMIHESDLV 60
           MD+  L  ++  F  +QRQ+LL LELL N+ KR+ H P  TRHRIRQL YFRMIH +   
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGT--- 60

Query: 61  CRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRVIQRKFVRF 120
                                + GL+ST++VDVEEMVAMFLH+LAHD+K+RVI+R+F+R 
Sbjct: 61  ---------------------IAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 120

Query: 121 SETVSQHFNLVLLAMVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDALDGTYINVNV 180
            ET+S+HFN+VLLA++RL+EEL+K+  PV N C DQ W+ FE   N L ALDGTYI VNV
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE---NCLGALDGTYIKVNV 180

Query: 181 PVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVIAG 216
           P  DR  +RTRK ++ TNVLGVCDTKGDFVYV+AG
Sbjct: 181 PASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAG 188

[Close]

BLAST of MELO3C031774.2 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 75.5 bits (184), Expect = 4.5e-14
Identity = 49/169 (28.99%), Postives = 88/169 (52.07%), Query Frame = 0


Query: 51  FRMIHESDLVCRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKN 110
           +++++  +  C ++ RMDK  F  LC LL+    L  T  + +E  +A+FL ++ H+L+ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 111 RVIQRKFVRFSETVSQHFNLVLLAMVRLYEELIKRLVPVTNN----CNDQHWKCFEVGMN 170
           R +Q  F    ET+S+HFN VL A++ + ++  +   P +N+     +D ++K      +
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQ---PNSNSDTLENDDPYFK------D 151

Query: 171 YLDALDGTYINVNVPVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVIAG 216
            +  +D  +I V V V ++  FR     +  NVL        F YV+AG
Sbjct: 152 CVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAG 191

[Close]

BLAST of MELO3C031774.2 vs. TrEMBL
Match: tr|A0A1S4DU32|A0A1S4DU32_CUCME (uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 4.1e-86
Identity = 167/215 (77.67%), Postives = 186/215 (86.51%), Query Frame = 0


Query: 1   MDQQTLLGVLTVFTLAQRQMLLTLELLMNNNKRLPHTPSNTRHRIRQLMYFRMIHESDLV 60
           MDQQTLLGVLT FTLAQRQ+LLTLELLMN+N+R+ +TP +T +RIRQL YFRMIHESDLV
Sbjct: 1   MDQQTLLGVLTAFTLAQRQILLTLELLMNDNRRITYTPFDTCNRIRQLAYFRMIHESDLV 60

Query: 61  CRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRVIQRKFVRF 120
           CRQSTRMD++TFAILCHLLR +  LSS +I+DVEEMVAMFLHVLAHD+KN VIQRKFVR 
Sbjct: 61  CRQSTRMDRRTFAILCHLLRTVSVLSSIEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRS 120

Query: 121 SETVSQHFNLVLLAMVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDALDGTYINVNV 180
            ETVS+HFNLVLL +VRLYE+LIKR V VTNNCNDQ WKCFE   N L  LDGTYI V+V
Sbjct: 121 GETVSRHFNLVLLVVVRLYEKLIKRPVSVTNNCNDQRWKCFE---NCLGTLDGTYIKVDV 180

Query: 181 PVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVIAG 216
           P  D PTFR RK +I TNVLGVCDTKGDFVYV+AG
Sbjct: 181 PATDWPTFRMRKGEIATNVLGVCDTKGDFVYVLAG 212

[Close]

BLAST of MELO3C031774.2 vs. TrEMBL
Match: tr|A0A1S3BYR8|A0A1S3BYR8_CUCME (uncharacterized protein LOC103495048 OS=Cucumis melo OX=3656 GN=LOC103495048 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 9.8e-72
Identity = 137/213 (64.32%), Postives = 170/213 (79.81%), Query Frame = 0


Query: 1   MDQQTLLGVLTVFTLAQRQMLLTLELLMNNNKRLPHTPSNTRHRIRQLMYFRMIHESDLV 60
           M +  L  ++ VF  +QRQ+LLTLELL N+ KR+ H P   RHRIRQL YFRMIH SDLV
Sbjct: 1   MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRVIQRKFVRF 120
           CRQSTRMD++ FAILCHLLR +  L+ST++VDVEEMVAM+LH+LAHD+KNRVIQR+F+R 
Sbjct: 61  CRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRS 120

Query: 121 SETVSQHFNLVLLAMVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDALDGTYINVNV 180
            E +S+HFN+VLLA++RL+ EL+K+  PV N+C DQ W+ FE   N L ALDGTYI VNV
Sbjct: 121 GEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRWFE---NCLGALDGTYIKVNV 180

Query: 181 PVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVI 214
           P  DR  ++TRK ++ TNVLGVCDTKGDFVYV+
Sbjct: 181 PASDRARYKTRKGEVATNVLGVCDTKGDFVYVL 210

[Close]

BLAST of MELO3C031774.2 vs. TrEMBL
Match: tr|A0A1S3CL59|A0A1S3CL59_CUCME (uncharacterized protein LOC103501690 OS=Cucumis melo OX=3656 GN=LOC103501690 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.2e-71
Identity = 140/205 (68.29%), Postives = 168/205 (81.95%), Query Frame = 0


Query: 15  LAQRQMLLTLELLMNNNKRLPHTPSNTRHRIRQLMYFRMIHESDLVCRQSTRMDKQTFAI 74
           + Q QMLL LE LMN+NKRLP TP NTRHRIRQL YF+MIH+S LVCR+ TR+D++T  I
Sbjct: 1   MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLII 60

Query: 75  LCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRVIQRKFVRFSETVSQHFNLVLLA 134
           LC+LL+ + GLS  +IVDVEEMVAMFL+VL H++KNR+IQ+KFVR  ET S HFNLV+ A
Sbjct: 61  LCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQKFVRSGETDSGHFNLVVFA 120

Query: 135 MVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDA----LDGTYINVNVPVGDRPTFRT 194
           +VRLY+E+IK+ V VTNNC DQHWK FEVG+ +++     LD TYI VNVP  DRPTFRT
Sbjct: 121 VVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRT 180

Query: 195 RKEKIVTNVLGVCDTKGDFVYVIAG 216
           RK +I TNVLGVCDTKGDFVYV+AG
Sbjct: 181 RKGEIATNVLGVCDTKGDFVYVLAG 205

[Close]

BLAST of MELO3C031774.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.2e-70
Identity = 134/163 (82.21%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 53  MIHESDLVCRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRV 112
           MIHESDLVCRQSTRMD++TFAILCHLLRN+ GLSST+IVDVEEMVAMFLHVLAHD+KNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 113 IQRKFVRFSETVSQHFNLVLLAMVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDALD 172
           IQ++FVR  ETVS+HFN+VLLA++RLYEELIKR VPVT+NCNDQ WKCFE   N L ALD
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---NCLGALD 120

Query: 173 GTYINVNVPVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVIAG 216
           GTYI VNVP GDRPTFRTRK +I TNVLGVCD KGDFVYV+AG
Sbjct: 121 GTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAG 160

[Close]

BLAST of MELO3C031774.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 9.5e-59
Identity = 121/215 (56.28%), Postives = 152/215 (70.70%), Query Frame = 0


Query: 1   MDQQTLLGVLTVFTLAQRQMLLTLELLMNNNKRLPHTPSNTRHRIRQLMYFRMIHESDLV 60
           MD+  L  ++  F  +QRQ+LL LELL N+ KR+ H P  TRHRIRQL YFRMIH +   
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGT--- 60

Query: 61  CRQSTRMDKQTFAILCHLLRNLPGLSSTKIVDVEEMVAMFLHVLAHDLKNRVIQRKFVRF 120
                                + GL+ST++VDVEEMVAMFLH+LAHD+K+RVI+R+F+R 
Sbjct: 61  ---------------------IAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 120

Query: 121 SETVSQHFNLVLLAMVRLYEELIKRLVPVTNNCNDQHWKCFEVGMNYLDALDGTYINVNV 180
            ET+S+HFN+VLLA++RL+EEL+K+  PV N C DQ W+ FE   N L ALDGTYI VNV
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE---NCLGALDGTYIKVNV 180

Query: 181 PVGDRPTFRTRKEKIVTNVLGVCDTKGDFVYVIAG 216
           P  DR  +RTRK ++ TNVLGVCDTKGDFVYV+AG
Sbjct: 181 PASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAG 188

The following BLAST results are available for this feature:

BLAST of MELO3C031774.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899496.1	6.2e-86	77.67	PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo]	[more]
XP_008454692.1	1.5e-71	64.32	PREDICTED: uncharacterized protein LOC103495048 [Cucumis melo]	[more]
XP_008463581.1	3.3e-71	68.29	PREDICTED: uncharacterized protein LOC103501690 [Cucumis melo]	[more]
ADN33754.1	4.8e-70	82.21	retrotransposon protein [Cucumis melo subsp. melo]	[more]
ADN34114.1	1.4e-58	56.28	retrotransposon protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C031774.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41980.1	4.5e-14	28.99	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]

BLAST of MELO3C031774.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C031774.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DU32\|A0A1S4DU32_CUCME	4.1e-86	77.67	uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=...	[more]
tr\|A0A1S3BYR8\|A0A1S3BYR8_CUCME	9.8e-72	64.32	uncharacterized protein LOC103495048 OS=Cucumis melo OX=3656 GN=LOC103495048 PE=...	[more]
tr\|A0A1S3CL59\|A0A1S3CL59_CUCME	2.2e-71	68.29	uncharacterized protein LOC103501690 OS=Cucumis melo OX=3656 GN=LOC103501690 PE=...	[more]
tr\|E5GBB2\|E5GBB2_CUCME	3.2e-70	82.21	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|E5GCB5\|E5GCB5_CUCME	9.5e-59	56.28	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031774.2.1	MELO3C031774.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 20..215
None	No IPR available	PANTHER	PTHR22930:SF112	SUBFAMILY NOT NAMED	coord: 20..215

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C031774.2	Silver-seed gourd	carmedB0706
MELO3C031774.2	Silver-seed gourd	carmedB1020
MELO3C031774.2	Cucumber (Chinese Long) v3	cucmedB230
MELO3C031774.2	Watermelon (97103) v2	medwmbB423
MELO3C031774.2	Wax gourd	medwgoB530
MELO3C031774.2	Cucumber (Gy14) v2	cgybmedB201
MELO3C031774.2	Cucumber (Gy14) v1	cgymedB432
MELO3C031774.2	Cucurbita maxima (Rimu)	cmamedB273
MELO3C031774.2	Cucurbita maxima (Rimu)	cmamedB863
MELO3C031774.2	Cucurbita moschata (Rifu)	cmomedB260
MELO3C031774.2	Cucurbita moschata (Rifu)	cmomedB857
MELO3C031774.2	Cucurbita pepo (Zucchini)	cpemedB693
MELO3C031774.2	Cucurbita pepo (Zucchini)	cpemedB951
MELO3C031774.2	Wild cucumber (PI 183967)	cpimedB224
MELO3C031774.2	Cucumber (Chinese Long) v2	cumedB223
MELO3C031774.2	Bottle gourd (USVL1VR-Ls)	lsimedB397
MELO3C031774.2	Watermelon (Charleston Gray)	medwcgB416
MELO3C031774.2	Watermelon (97103) v1	medwmB447