MELO3C031759.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031759.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 5641474 .. 5643727 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACAATTCCGTTGTGGGGATGTCAAAATGTGTTTACAGCTAATACCCAAAAACCTGCAAAGATATTGTCAAGAGAGTCCAAAGCGAAGCCCCAAAAATTCAATTTGGTCAGAGGAATTTACGTGAATAACGACATTTCCAAGACCTACTCTGATGGCTTTAGGATGGCAATGAGTGTAAAAAATTTGTAGGTTTTCCCCACACGATTTCACATTAAGAAACTGAGTTTGGTTCTGAAAAAAATTTCAACTTTTACCTTGGCCCCAGCTGTTCTTAGGGAAGATTTCAATTGAAAACTTCAAATTCAAAACTCAAATTATTATTATTATTATTATGCATCAACATGTCATTTTGGTAGTGGATATAACATATCTAAGTAGTTGCAAACCATACATATAATATAGTTATTGCTTATCATTTATAAACAAGGGGACAAACAACATACAGTTTACCAACTATTATCATCATTTCATTCGACGCCACACAAAATCACCATGGTGGTGGCTTTCACACATCAGTGAAACGCAAGTACTCCTTCTTTGATGGTAGCTCCATAGTTTCGTAGCCATTAGGGAACATTTGCTTGGCCTGCTCATTACTCACACTCGGCGAGATCACACACTTGCTGCCCGGCTTCCAGTTCACCGGAGTCGCCACCTTGTGCTTTGCAGCCTTTTGTAAAGACTCCAAAACCCTCAACACTTCATCTATGTTCCTCCCAGTACTTGCTGGGTACAAGAAGCTTAGCTTCACCTTCTTGTCTGGACCGATGATGTGCAATGCCCGCGATGGCACTGCACCACCCGACGGGTCTTTCTCGTCGGGGTCGACCATATTCAGTTGCTTGATGATCTCTCTCTTTGGATCCGCCAGTATTGGATACGTGACTTTTTTCCCTTTCTGCAAAGGTATGTTATCCAATTGGATTAACTAATCAAAAGCAAAAGCTATTCATTGAGTAACCGGAACACTCACATTGAAGGCTTCGATATCTTTGATCCACTCGGTATGTGATTGAACATCATCACAAGATAGTCCTATTAGCTTCACACCTCGTTTGCTGAACTCCTCTGCTTGAGCAGCCATCATCCCTAGCTCCGTGGTACAAACGGGAGTAAAATCACCTGCATGCAAATGCAAACGCCAAAGCAACAAGCAACAAGCAACGATGCTACTTCAATGTCCAAGTATAAAATCAAATCAAGGTCCATTTGGTAACTACTTGATTTTAAGTCTTCCGTTTATGACCCCTTACGCTTCTTGATTGAGAAAACTTGGGTGCTGCTTTTAACTGTTTTTATTTCTTTTTTACCCAATCATTGTCCTTAAAAGCCATATTTCGAAAACCCGTTCACTAAACAATACTATTCAACTCTATGACATGAAAGGAAATAGGCTTAGTTTAAAAAAAAGAAAATTAAAAAGCACTGAGAGTGATCTTGAAAGAGTACCCGGGTGAGAGAAGATAATGCCCCAGCTATCGCCGAGGTAATCATATAAACTGATCTTTCCATGGGTGCTATCAGCTTGAATATTAGGTATTGTATCGCCGATTGTAAGGCCAGGCATCTTGCTACCTACAGGAAGAGAATCGTAGAATAGTACAAATTTAAATTCTGGTGTTTTGATGTGTGTTTTTCTTTGTTTCTTTTACGTATATATGCAGTTTTCTGGCACTTTCTTGACTTTCTGCATGTAGCGAACGTGGCAGTTGTCGTGTCTATTGGTGGATGTTGCATGCATTTTGTTGAAGACATGATACCTACTTGTCTCAGTTTCCTTATTTTATACTTTTTTTCAGCCATCCAACAAGTGTGTCAAGTAATTTCACTTAAGCCCAACATGACATGTGGACGATTTTTAGCCTCCCTTGGTTGATCCGATCGACGTAGGAGAATATAGAAATAGAAATCCAGTTCCTTCCCATAATATCATCCATTTCATTCCCGAACACTTCTGATCAATCATTAATCTGATCATTACAGCACTGTGGGCCCTTTCACCTACTCCAAAGTTTGGTAACATCAGAATAGTGAGATCAGAGGTAATATTGTTAACCAACAAAATGAACATACATCATTCATACCTATAATCACCAGCAGCAGGCTCCGAAGGAATTCAAACCCTGAATTTATTAGGTGGCTATGGGTGGGAGAAGCTTGAGTTTTGCTTGCATTGCCGAAGGCTAATTAGTCACCAAATTAACCCCTTTTTCGGTTGGAGGGTTCAAGAGTGCAAGAAGTCTTACTAA

mRNA sequence

ATGATACAATTCCGTTGTGGGGATGTCAAAATGTGTTTACAGCTAATACCCAAAAACCTGCAAAGATATTGTCAAGAGAGTCCAAAGCGAAGCCCCAAAAATTCAATTTGGTCAGAGGAATTTACGGGACAAACAACATACAGTTTACCAACTATTATCATCATTTCATTCGACGCCACACAAAATCACCATGGTGGTGGCTTTCACACATCAGTGAAACGCAAGTACTCCTTCTTTGATGGTAGCTCCATACCATTAGGGAACATTTGCTTGGCCTGCTCATTACTCACACTCGGCGAGATCACACACTTGCTGCCCGGCTTCCAGTTCACCGGAGTCGCCACCTTGTGCTTTGCAGCCTTTTGTAAAGACTCCAAAACCCTCAACACTTCATCTATGTTCCTCCCAGTACTTGCTGGGTACAAGAAGCTTAGCTTCACCTTCTTGTCTGGACCGATGATGTGCAATGCCCGCGATGGCACTGCACCACCCGACGGGTCTTTCTCGTCGGGGTCGACCATATTCAGTTGCTTGATGATCTCTCTCTTTGGATCCGCCAGTATTGGATACGTGACTTTTTTCCCTTTCTGCAAAGCCATCATCCCTAGCTCCGTGGTACAAACGGGAGTAAAATCACCTGCATGCAAATGCAAACGCCAAAGCAACAAGCAACAAGCAACGATGCTACTTCAATGTCCAAGTATAAAATCAAATCAAGGTCCATTTGCAGCAGGCTCCGAAGGAATTCAAACCCTGAATTTATTAGGTGGCTATGGGTGGGAGAAGCTTGAGTTTTGCTTGCATTGCCGAAGGCTAATTAGTCACCAAATTAACCCCTTTTTCGGTTGGAGGGTTCAAGAGTGCAAGAAGTCTTACTAA

Coding sequence (CDS)

ATGATACAATTCCGTTGTGGGGATGTCAAAATGTGTTTACAGCTAATACCCAAAAACCTGCAAAGATATTGTCAAGAGAGTCCAAAGCGAAGCCCCAAAAATTCAATTTGGTCAGAGGAATTTACGGGACAAACAACATACAGTTTACCAACTATTATCATCATTTCATTCGACGCCACACAAAATCACCATGGTGGTGGCTTTCACACATCAGTGAAACGCAAGTACTCCTTCTTTGATGGTAGCTCCATACCATTAGGGAACATTTGCTTGGCCTGCTCATTACTCACACTCGGCGAGATCACACACTTGCTGCCCGGCTTCCAGTTCACCGGAGTCGCCACCTTGTGCTTTGCAGCCTTTTGTAAAGACTCCAAAACCCTCAACACTTCATCTATGTTCCTCCCAGTACTTGCTGGGTACAAGAAGCTTAGCTTCACCTTCTTGTCTGGACCGATGATGTGCAATGCCCGCGATGGCACTGCACCACCCGACGGGTCTTTCTCGTCGGGGTCGACCATATTCAGTTGCTTGATGATCTCTCTCTTTGGATCCGCCAGTATTGGATACGTGACTTTTTTCCCTTTCTGCAAAGCCATCATCCCTAGCTCCGTGGTACAAACGGGAGTAAAATCACCTGCATGCAAATGCAAACGCCAAAGCAACAAGCAACAAGCAACGATGCTACTTCAATGTCCAAGTATAAAATCAAATCAAGGTCCATTTGCAGCAGGCTCCGAAGGAATTCAAACCCTGAATTTATTAGGTGGCTATGGGTGGGAGAAGCTTGAGTTTTGCTTGCATTGCCGAAGGCTAATTAGTCACCAAATTAACCCCTTTTTCGGTTGGAGGGTTCAAGAGTGCAAGAAGTCTTACTAA

Protein sequence

MIQFRCGDVKMCLQLIPKNLQRYCQESPKRSPKNSIWSEEFTGQTTYSLPTIIIISFDATQNHHGGGFHTSVKRKYSFFDGSSIPLGNICLACSLLTLGEITHLLPGFQFTGVATLCFAAFCKDSKTLNTSSMFLPVLAGYKKLSFTFLSGPMMCNARDGTAPPDGSFSSGSTIFSCLMISLFGSASIGYVTFFPFCKAIIPSSVVQTGVKSPACKCKRQSNKQQATMLLQCPSIKSNQGPFAAGSEGIQTLNLLGGYGWEKLEFCLHCRRLISHQINPFFGWRVQECKKSY
Homology
[Close]
BLAST of MELO3C031759.2 vs. TrEMBL
Match: tr|A0A293LNX8|A0A293LNX8_ORNER (Peroxiredoxin (Fragment) OS=Ornithodoros erraticus OX=265619 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09
Identity = 47/103 (45.63%), Postives = 56/103 (54.37%), Query Frame = 0 

Query: 75  KYSFFDG---SSIPLGNICLACSLLTLGEITHLLPGFQFTGVATLCFAAFCKDSKTLNTS 134
           +Y   DG   S IPLGN     S +TLG   H +P FQ  GVAT   +    +S    TS
Sbjct: 5   RYFLPDGTGISLIPLGNNFGISSSVTLGSTMHGVPFFQPAGVATFLVSVTSNESVARRTS 64

Query: 135 SMFLPVLAGYKKLSFTFLSGPMMCNARDGTAPPDGSFSSGSTI 175
           S F PV+AGY   SF FLSGPMM  AR     P  SFS+G+ +
Sbjct: 65  SKFRPVVAGYNMESFIFLSGPMMNTARQVRGSPSLSFSTGNRV 107

[Close]
BLAST of MELO3C031759.2 vs. TrEMBL
Match: tr|A0A293MAW4|A0A293MAW4_ORNER (Glutathione peroxidase (Fragment) OS=Ornithodoros erraticus OX=265619 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.2e-09
Identity = 46/99 (46.46%), Postives = 53/99 (53.54%), Query Frame = 0 

Query: 75  KYSFFDG---SSIPLGNICLACSLLTLGEITHLLPGFQFTGVATLCFAAFCKDSKTLNTS 134
           +Y   DG   S IPLGN     S +TLG   H +P FQ  GVAT   +    +S    TS
Sbjct: 4   RYFLPDGTGISLIPLGNNFGISSSVTLGSTMHGVPFFQPAGVATFLVSVTSNESVARRTS 63

Query: 135 SMFLPVLAGYKKLSFTFLSGPMMCNARDGTAPPDGSFSS 171
           S F PV+AGY   SF FLSGPMM  AR     P  SFS+
Sbjct: 64  SKFRPVVAGYNMESFIFLSGPMMNTARQVRGSPSLSFST 102

[Close]
BLAST of MELO3C031759.2 vs. TrEMBL
Match: tr|A0A1A8ABD8|A0A1A8ABD8_NOTFU (Phosphatidic acid phosphatase type 2 domain containing 2 (Fragment) OS=Nothobranchius furzeri OX=105023 GN=PPAPDC2 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.3e-05
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 0 

Query: 98  LGEITHLLPGFQFTGVATLCFAAFCKDSKTLNTSSMFLPVLAGYKKLSFTFLSGPMMCNA 157
           LG      PGFQ  GVAT   A   ++S T  +SS   PV+AGY+  + +FLSGP+M   
Sbjct: 10  LGGTITQTPGFQSAGVATRTPAVSWRESITRKSSSKLRPVVAGYRMDNLSFLSGPIMNTQ 69

Query: 158 RDGTAPPDGSFSSGSTI 175
           R  T  P  SFSSGS++
Sbjct: 70  RAVTGMPSLSFSSGSSM 86

The following BLAST results are available for this feature:
BLAST of MELO3C031759.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031759.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031759.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031759.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A293LNX8|A0A293LNX8_ORNER1.1e-0945.63Peroxiredoxin (Fragment) OS=Ornithodoros erraticus OX=265619 PE=4 SV=1[more]
tr|A0A293MAW4|A0A293MAW4_ORNER7.2e-0946.46Glutathione peroxidase (Fragment) OS=Ornithodoros erraticus OX=265619 PE=4 SV=1[more]
tr|A0A1A8ABD8|A0A1A8ABD8_NOTFU6.3e-0545.45Phosphatidic acid phosphatase type 2 domain containing 2 (Fragment) OS=Nothobran... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031759.2.1MELO3C031759.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C031759.2CmaCh06G015830Cucurbita maxima (Rimu)cmamedB863
MELO3C031759.2Lsi05G013950Bottle gourd (USVL1VR-Ls)lsimedB397
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031759.2Wax gourdmedwgoB517
MELO3C031759.2Wax gourdmedwgoB530
MELO3C031759.2Cucumber (Gy14) v2cgybmedB201
MELO3C031759.2Cucumber (Gy14) v1cgymedB432
MELO3C031759.2Cucurbita maxima (Rimu)cmamedB273
MELO3C031759.2Cucurbita maxima (Rimu)cmamedB398
MELO3C031759.2Cucurbita moschata (Rifu)cmomedB260
MELO3C031759.2Cucurbita moschata (Rifu)cmomedB385
MELO3C031759.2Cucurbita moschata (Rifu)cmomedB857
MELO3C031759.2Cucurbita pepo (Zucchini)cpemedB170
MELO3C031759.2Cucurbita pepo (Zucchini)cpemedB693
MELO3C031759.2Cucurbita pepo (Zucchini)cpemedB951
MELO3C031759.2Wild cucumber (PI 183967)cpimedB224
MELO3C031759.2Cucumber (Chinese Long) v2cumedB223
MELO3C031759.2Melon (DHL92) v3.6.1medmedB049
MELO3C031759.2Bottle gourd (USVL1VR-Ls)lsimedB032
MELO3C031759.2Watermelon (Charleston Gray)medwcgB416
MELO3C031759.2Watermelon (Charleston Gray)medwcgB437
MELO3C031759.2Watermelon (97103) v1medwmB447
MELO3C031759.2Silver-seed gourdcarmedB0075
MELO3C031759.2Silver-seed gourdcarmedB0292
MELO3C031759.2Silver-seed gourdcarmedB0749
MELO3C031759.2Cucumber (Chinese Long) v3cucmedB230
MELO3C031759.2Watermelon (97103) v2medwmbB423