MELO3C031752.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031752.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionATP synthase subunit alpha, chloroplastic
Locationchr06 : 16032469 .. 16032651 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCTAAATTTAGAATCAAATAATGTTGGTGTTGTATTAATGAGTGATTGTTTGCTGATACAAGAGGGAAGTTCTATAAAAGCAACAAGAAGAATTGCTCAGATACTAGTAAAGGAGGCTTATTAGGTCGTGTTATAAATGCCCTCGCTAAACCTATTGATGGTTGAGGTGAAATTTCATCTT

mRNA sequence

GCTCTAAATTTAGAATCAAATAATGTTGGTGTTGTATTAATGAGTGATTGTTTGCTGATACAAGAGGGAAGTTCTATAAAAGCAACAAGAAGAATTGCTCAGATACTAGTAAAGGAGGCTTATTAGGTCGTGTTATAAATGCCCTCGCTAAACCTATTGATGGTTGAGGTGAAATTTCATCTT

Coding sequence (CDS)

ATGAGTGATTGTTTGCTGATACAAGAGGGAAGTTCTATAAAAGCAACAAGAAGAATTGCTCAGATACTAGTAAAGGAGGCTTATTAG

Protein sequence

MSDCLLIQEGSSIKATRRIAQILVKEAY
Homology
[Close]
BLAST of MELO3C031752.2 vs. TAIR10
Match: ATCG00120.1 (ATP synthase subunit alpha)

HSP 1 Score: 40.0 bits (92), Expect = 2.7e-04
Identity = 20/28 (71.43%), Postives = 23/28 (82.14%), Query Frame = 0 

Query: 1   MSDCLLIQEGSSIKATRRIAQILVKEAY 29
           M D L+IQEGSS+KAT +IAQI V EAY
Sbjct: 77  MGDGLMIQEGSSVKATGKIAQIPVSEAY 104

The following BLAST results are available for this feature:
BLAST of MELO3C031752.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031752.2 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00120.12.7e-0471.43ATP synthase subunit alpha[more]
BLAST of MELO3C031752.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031752.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006754 ATP biosynthetic process
biological_process GO:0046034 ATP metabolic process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006811 ion transport
biological_process GO:0015992 proton transport
biological_process GO:0006810 transport
cellular_component GO:0009579 thylakoid
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0016020 membrane
cellular_component GO:0009536 plastid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009507 chloroplast
molecular_function GO:0032559 adenyl ribonucleotide binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031752.2.1MELO3C031752.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031752.2Silver-seed gourdcarmedB0521
MELO3C031752.2Silver-seed gourdcarmedB0771
MELO3C031752.2Cucumber (Chinese Long) v3cucmedB247
MELO3C031752.2Watermelon (97103) v2medwmbB424
MELO3C031752.2Wax gourdmedwgoB546
MELO3C031752.2Cucumber (Gy14) v2cgybmedB216
MELO3C031752.2Cucumber (Gy14) v1cgymedB606
MELO3C031752.2Cucurbita maxima (Rimu)cmamedB274
MELO3C031752.2Cucurbita maxima (Rimu)cmamedB496
MELO3C031752.2Cucurbita moschata (Rifu)cmomedB261
MELO3C031752.2Cucurbita moschata (Rifu)cmomedB483
MELO3C031752.2Cucurbita pepo (Zucchini)cpemedB630
MELO3C031752.2Cucurbita pepo (Zucchini)cpemedB694
MELO3C031752.2Wild cucumber (PI 183967)cpimedB240
MELO3C031752.2Cucumber (Chinese Long) v2cumedB239
MELO3C031752.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C031752.2Watermelon (Charleston Gray)medwcgB417
MELO3C031752.2Watermelon (97103) v1medwmB448