MELO3C031742.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031742.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Protein LAZ1
Location	chr06 : 15005938 .. 15006152 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACTGTACTGCCTGATTCAGTTCTATACAGTTACAAGGATGAATTGGTACATATAAAGCCATTGGCCAAATTTTTTATGTTTAAATCTATAGTATTTTTGACTTGGTGGCAAGGTGTTGGAATTATATTGCTCTCCTATCCAGTTTGTGTACTTTTTTTCCATCTCAAGGAATATCGAAACGTCACATAAAATTTCCATTAGCTCCTCAT

mRNA sequence

ATGGGCACTGTACTGCCTGATTCAGTTCTATACAGTTACAAGGATGAATTGGTACATATAAAGCCATTGGCCAAATTTTTTATGTTTAAATCTATAGTATTTTTGACTTGGTGGCAAGGTGTTGGAATTATATTGCTCTCCTATCCAGTTTGTGTACTTTTTTTCCATCTCAAGGAATATCGAAACGTCACATAAAATTTCCATTAGCTCCTCAT

Coding sequence (CDS)

ATGGGCACTGTACTGCCTGATTCAGTTCTATACAGTTACAAGGATGAATTGGTACATATAAAGCCATTGGCCAAATTTTTTATGTTTAAATCTATAGTATTTTTGACTTGGTGGCAAGGTGTTGGAATTATATTGCTCTCCTATCCAGTTTGTGTACTTTTTTTCCATCTCAAGGAATATCGAAACGTCACATAA

Protein sequence

MGTVLPDSVLYSYKDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLSYPVCVLFFHLKEYRNVT

Homology

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BLAST of MELO3C031742.2 vs. NCBI nr
Match: XP_004144883.1 (PREDICTED: transmembrane protein 184C isoform X1 [Cucumis sativus] >XP_011658627.1 PREDICTED: transmembrane protein 184C isoform X1 [Cucumis sativus] >KGN43330.1 hypothetical protein Csa_7G024040 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDELVHIKPLAKF MFKSIVFLTWWQGVGI LLS
Sbjct: 213 KDELVHIKPLAKFLMFKSIVFLTWWQGVGIALLS 246

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BLAST of MELO3C031742.2 vs. NCBI nr
Match: XP_008447853.1 (PREDICTED: protein LAZ1 isoform X1 [Cucumis melo] >XP_008447854.1 PREDICTED: protein LAZ1 isoform X1 [Cucumis melo] >XP_008447855.1 PREDICTED: protein LAZ1 isoform X1 [Cucumis melo] >XP_008447856.1 PREDICTED: protein LAZ1 isoform X1 [Cucumis melo] >XP_016900495.1 PREDICTED: protein LAZ1 isoform X1 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDELVHIKPLAKF MFKSIVFLTWWQGVGI LLS
Sbjct: 213 KDELVHIKPLAKFLMFKSIVFLTWWQGVGIALLS 246

[Close]

BLAST of MELO3C031742.2 vs. NCBI nr
Match: XP_008447860.1 (PREDICTED: protein LAZ1 isoform X2 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDELVHIKPLAKF MFKSIVFLTWWQGVGI LLS
Sbjct: 213 KDELVHIKPLAKFLMFKSIVFLTWWQGVGIALLS 246

[Close]

BLAST of MELO3C031742.2 vs. NCBI nr
Match: XP_011658628.1 (PREDICTED: transmembrane protein 184C isoform X2 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDELVHIKPLAKF MFKSIVFLTWWQGVGI LLS
Sbjct: 213 KDELVHIKPLAKFLMFKSIVFLTWWQGVGIALLS 246

[Close]

BLAST of MELO3C031742.2 vs. NCBI nr
Match: XP_011658629.1 (PREDICTED: transmembrane protein 184C isoform X3 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDELVHIKPLAKF MFKSIVFLTWWQGVGI LLS
Sbjct: 213 KDELVHIKPLAKFLMFKSIVFLTWWQGVGIALLS 246

[Close]

BLAST of MELO3C031742.2 vs. TAIR10
Match: AT4G38360.2 (Protein of unknown function (DUF300))

HSP 1 Score: 60.5 bits (145), Expect = 4.5e-10
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDEL HI+PLAKF  FKSIVFLTWWQGV I LLS
Sbjct: 224 KDELAHIQPLAKFLTFKSIVFLTWWQGVAIALLS 257

[Close]

BLAST of MELO3C031742.2 vs. TAIR10
Match: AT1G77220.1 (Protein of unknown function (DUF300))

HSP 1 Score: 50.8 bits (120), Expect = 3.5e-07
Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILL 47
           KD+L  IKPLAKF  FKSIVFLTWWQG+ +  L
Sbjct: 246 KDKLAPIKPLAKFLTFKSIVFLTWWQGIIVAFL 278

[Close]

BLAST of MELO3C031742.2 vs. TAIR10
Match: AT1G23070.1 (Protein of unknown function (DUF300))

HSP 1 Score: 50.4 bits (119), Expect = 4.6e-07
Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 0


Query: 15  DELVHIKPLAKFFMFKSIVFLTWWQGVGIILLSY 49
           + L  IKPLAKF  FK+IVF TWWQG GI LL Y
Sbjct: 219 ERLKEIKPLAKFISFKAIVFATWWQGFGIALLCY 252

[Close]

BLAST of MELO3C031742.2 vs. Swiss-Prot
Match: sp|F4JTN2|LAZ1_ARATH (Protein LAZ1 OS=Arabidopsis thaliana OX=3702 GN=LAZ1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 8.1e-09
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDEL HI+PLAKF  FKSIVFLTWWQGV I LLS
Sbjct: 224 KDELAHIQPLAKFLTFKSIVFLTWWQGVAIALLS 257

[Close]

BLAST of MELO3C031742.2 vs. Swiss-Prot
Match: sp|Q94CA0|LAZH1_ARATH (Protein LAZ1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g77220 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 6.4e-06
Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILL 47
           KD+L  IKPLAKF  FKSIVFLTWWQG+ +  L
Sbjct: 246 KDKLAPIKPLAKFLTFKSIVFLTWWQGIIVAFL 278

[Close]

BLAST of MELO3C031742.2 vs. Swiss-Prot
Match: sp|Q5BPZ5|LAZH2_ARATH (Protein LAZ1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g23070 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 8.4e-06
Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 0


Query: 15  DELVHIKPLAKFFMFKSIVFLTWWQGVGIILLSY 49
           + L  IKPLAKF  FK+IVF TWWQG GI LL Y
Sbjct: 219 ERLKEIKPLAKFISFKAIVFATWWQGFGIALLCY 252

[Close]

BLAST of MELO3C031742.2 vs. TrEMBL
Match: tr|A0A1S3BJA8|A0A1S3BJA8_CUCME (protein LAZ1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490216 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.8e-09
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDELVHIKPLAKF MFKSIVFLTWWQGVGI LLS
Sbjct: 213 KDELVHIKPLAKFLMFKSIVFLTWWQGVGIALLS 246

[Close]

BLAST of MELO3C031742.2 vs. TrEMBL
Match: tr|A0A1S3BJ10|A0A1S3BJ10_CUCME (protein LAZ1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490216 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.8e-09
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDELVHIKPLAKF MFKSIVFLTWWQGVGI LLS
Sbjct: 213 KDELVHIKPLAKFLMFKSIVFLTWWQGVGIALLS 246

[Close]

BLAST of MELO3C031742.2 vs. TrEMBL
Match: tr|A0A0A0K0U8|A0A0A0K0U8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G024040 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.8e-09
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDELVHIKPLAKF MFKSIVFLTWWQGVGI LLS
Sbjct: 213 KDELVHIKPLAKFLMFKSIVFLTWWQGVGIALLS 246

[Close]

BLAST of MELO3C031742.2 vs. TrEMBL
Match: tr|A0A2I0BHC1|A0A2I0BHC1_9ASPA (Uncharacterized protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash004688 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.9e-08
Identity = 33/47 (70.21%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 1   MGTVLPDSVLY-SYKDELVHIKPLAKFFMFKSIVFLTWWQGVGIILL 47
           MG VLP S  Y + KDEL HI PLAKF  FKSIVFLTWWQGV + LL
Sbjct: 283 MGLVLPSSQFYAAIKDELEHINPLAKFLTFKSIVFLTWWQGVAVALL 329

[Close]

BLAST of MELO3C031742.2 vs. TrEMBL
Match: tr|A0A200QZV9|A0A200QZV9_9MAGN (Organic solute transporter Ost-alpha OS=Macleaya cordata OX=56857 GN=BVC80_1823g64 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-07
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 14  KDELVHIKPLAKFFMFKSIVFLTWWQGVGIILLS 48
           KDEL HIKPLAKF +FKSIVFLTWWQGV I LLS
Sbjct: 224 KDELAHIKPLAKFLVFKSIVFLTWWQGVAIALLS 257

The following BLAST results are available for this feature:

BLAST of MELO3C031742.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144883.1	1.2e-08	94.12	PREDICTED: transmembrane protein 184C isoform X1 [Cucumis sativus] >XP_011658627...	[more]
XP_008447853.1	1.2e-08	94.12	PREDICTED: protein LAZ1 isoform X1 [Cucumis melo] >XP_008447854.1 PREDICTED: pro...	[more]
XP_008447860.1	1.2e-08	94.12	PREDICTED: protein LAZ1 isoform X2 [Cucumis melo]	[more]
XP_011658628.1	1.2e-08	94.12	PREDICTED: transmembrane protein 184C isoform X2 [Cucumis sativus]	[more]
XP_011658629.1	1.2e-08	94.12	PREDICTED: transmembrane protein 184C isoform X3 [Cucumis sativus]	[more]

BLAST of MELO3C031742.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38360.2	4.5e-10	82.35	Protein of unknown function (DUF300)	[more]
AT1G77220.1	3.5e-07	69.70	Protein of unknown function (DUF300)	[more]
AT1G23070.1	4.6e-07	67.65	Protein of unknown function (DUF300)	[more]

BLAST of MELO3C031742.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JTN2\|LAZ1_ARATH	8.1e-09	82.35	Protein LAZ1 OS=Arabidopsis thaliana OX=3702 GN=LAZ1 PE=1 SV=1	[more]
sp\|Q94CA0\|LAZH1_ARATH	6.4e-06	69.70	Protein LAZ1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g77220 PE=2 SV=1	[more]
sp\|Q5BPZ5\|LAZH2_ARATH	8.4e-06	67.65	Protein LAZ1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g23070 PE=2 SV=1	[more]

BLAST of MELO3C031742.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJA8\|A0A1S3BJA8_CUCME	7.8e-09	94.12	protein LAZ1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490216 PE=4 SV=1	[more]
tr\|A0A1S3BJ10\|A0A1S3BJ10_CUCME	7.8e-09	94.12	protein LAZ1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490216 PE=4 SV=1	[more]
tr\|A0A0A0K0U8\|A0A0A0K0U8_CUCSA	7.8e-09	94.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G024040 PE=4 SV=1	[more]
tr\|A0A2I0BHC1\|A0A2I0BHC1_9ASPA	3.9e-08	70.21	Uncharacterized protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash004688 P...	[more]
tr\|A0A200QZV9\|A0A200QZV9_9MAGN	3.3e-07	85.29	Organic solute transporter Ost-alpha OS=Macleaya cordata OX=56857 GN=BVC80_1823g...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009626	plant-type hypersensitive response

Vocabulary: **INTERPRO**
Term	Definition
IPR031171	LAZ1
IPR005178	Ostalpha/TMEM184C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009626	plant-type hypersensitive response
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031742.2.1	MELO3C031742.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005178	Organic solute transporter subunit alpha/Transmembrane protein 184	PFAM	PF03619	Solute_trans_a	coord: 11..51 e-value: 8.0E-10 score: 38.6
IPR005178	Organic solute transporter subunit alpha/Transmembrane protein 184	PANTHER	PTHR23423	ORGANIC SOLUTE TRANSPORTER-RELATED	coord: 13..47
IPR031171	Lazarus 1	PANTHER	PTHR23423:SF23	PROTEIN LAZ1	coord: 13..47

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C031742.2	Cucumber (Gy14) v2	cgybmedB216
MELO3C031742.2	Cucumber (Gy14) v1	cgymedB338
MELO3C031742.2	Cucurbita maxima (Rimu)	cmamedB274
MELO3C031742.2	Cucurbita maxima (Rimu)	cmamedB496
MELO3C031742.2	Cucurbita moschata (Rifu)	cmomedB261
MELO3C031742.2	Cucurbita moschata (Rifu)	cmomedB483
MELO3C031742.2	Cucurbita pepo (Zucchini)	cpemedB630
MELO3C031742.2	Cucurbita pepo (Zucchini)	cpemedB694
MELO3C031742.2	Wild cucumber (PI 183967)	cpimedB240
MELO3C031742.2	Cucumber (Chinese Long) v2	cumedB239
MELO3C031742.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C031742.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C031742.2	Watermelon (97103) v1	medwmB448
MELO3C031742.2	Silver-seed gourd	carmedB0771
MELO3C031742.2	Cucumber (Chinese Long) v3	cucmedB247
MELO3C031742.2	Watermelon (97103) v2	medwmbB424
MELO3C031742.2	Wax gourd	medwgoB531