MELO3C031739.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031739.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMajor latex-like protein
Locationchr06 : 15082776 .. 15084253 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACTCAGCTTGAAATTTTATCACATCAAATAAAAATGAGCCAAAGTTATAGCATTGTTGCAATGGTTGAGCTAAAATCTCACATTGAGAAGTTCTATGGCTTCTTCAAAAACCATGTGGGAGATTTGGTCAATCTATTTCCAGATTTATACCAAAGCATTCACCTTGTAGAAGGCCAATATTTCTCTGTTGGATCTGTTATACTATTAAATACCATCTTGGTAAGAAATATTACTTTTAATCTTCTCTTAATATATTCTTCTCTCCTAATTAATACAGTTATATTCAACATTATTCTCCATTTCATTTAGGTTTTTCTGGGTCAAAACTCTTAAAAAATAACTAATTTTGGCTACGTAATTTATTGACATGAGTTTGCTAAAGGGTTAAGAAGGAATGGGATATTAATCTATATAACTAACTACCTAAGATTTAATATCCTTTGAGTCCTTTTAATATTCAATTTTGTAAGTTTTTGATTAGTTGTTCCATGATATTAACGCAGATGCACATAAGTTGTAGTTTGAACACTCATGAATATAAAAAAACACTACTACAACCTTCGCTTTGGATGTCAGTTGACAACTTATGACAGAATCTCTTTTGCTTACAAAAATTTCATTTCAGATGACGGTTTTCAACCTGCATCGAAGATAGACATATGATCCCAGTTTTAAACCACCATCTAAAGTGAAAAGTTCAGGGGGGAAATTTTTGAAAAGGGTGCCAAAAACAGTCTCCAAATTGTTGTGGTCAAAATATAATGCAATAACTATTACTTTACTCCCTTCCACTCTTTAAAAAAGAAAGATAGGGTTATCTGTGCAAAAACTCCTTCCTAAATCCTCAAATTTTACATCTAAATTAATTGACCTTAAGACTTTCAATTTTAAGCCTATATCTGATTCTTTTATATATATGTCGACCGTTTGTGGGTTTTTTAATTTGTAATTTAACGATCAAACAGGAGCCGATCAAGTTGTTTCAGAAAAATGGTTAGTGAGCGGTGTGGATGATGCAAAAAAATGCATAATCTATGAAGCTGTTGAAGGAGACATGCAAAAGTATTACAAAGTTCTTAGAACAAAGCTGGAAGTTGTTAATAGAAGATCAAGCAAAATAGGAAAAGGAAGCTTCGCAAAATGGACTGTTGAGTTTGAAAAGGCTAATGAGAATGTGCCTTCACCTGACAGCCACATGGAAATTTTTGTCAAAATTTCCAAAGGAATTGATGCTTATCTTTCCAAACAACTAATTAAACCCTAAAAACCCAACTATGTTAGTGTGTGTGAGACCTAAACTATGCCTTTTGTTTTAATTTGTCTCCTTGGTTTGTTCTCAAACGAGAAATTGTGTGTAATGTGATCTATGTACACTAAGAATAATTATGCATGTGGGATTTAGGGAAATGTGTGTATCTGATGTAATCTGTAATATTTTGAAGATGAAAAAATAGACCTATGTTCTTTTTTTCTCTA

mRNA sequence

CCACTCAGCTTGAAATTTTATCACATCAAATAAAAATGAGCCAAAGTTATAGCATTGTTGCAATGGTTGAGCTAAAATCTCACATTGAGAAGTTCTATGGCTTCTTCAAAAACCATGTGGGAGATTTGGTCAATCTATTTCCAGATTTATACCAAAGCATTCACCTTGTAGAAGGCCAATATTTCTCTGTTGGATCTGTTATACTATTAAATACCATCTTGGAGCCGATCAAGTTGTTTCAGAAAAATGGTTAGTGAGCGGTGTGGATGATGCAAAAAAATGCATAATCTATGAAGCTGTTGAAGGAGACATGCAAAAGTATTACAAAGTTCTTAGAACAAAGCTGGAAGTTGTTAATAGAAGATCAAGCAAAATAGGAAAAGGAAGCTTCGCAAAATGGACTGTTGAGTTTGAAAAGGCTAATGAGAATGTGCCTTCACCTGACAGCCACATGGAAATTTTTGTCAAAATTTCCAAAGGAATTGATGCTTATCTTTCCAAACAACTAATTAAACCCTAAAAACCCAACTATGTTAGTGTGTGTGAGACCTAAACTATGCCTTTTGTTTTAATTTGTCTCCTTGGTTTGTTCTCAAACGAGAAATTGTGTGTAATGTGATCTATGTACACTAAGAATAATTATGCATGTGGGATTTAGGGAAATGTGTGTATCTGATGTAATCTGTAATATTTTGAAGATGAAAAAATAGACCTATGTTCTTTTTTTCTCTA

Coding sequence (CDS)

ATGAGCCAAAGTTATAGCATTGTTGCAATGGTTGAGCTAAAATCTCACATTGAGAAGTTCTATGGCTTCTTCAAAAACCATGTGGGAGATTTGGTCAATCTATTTCCAGATTTATACCAAAGCATTCACCTTGTAGAAGGCCAATATTTCTCTGTTGGATCTGTTATACTATTAAATACCATCTTGGAGCCGATCAAGTTGTTTCAGAAAAATGGTTAG

Protein sequence

MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVILLNTILEPIKLFQKNG
Homology
[Close]
BLAST of MELO3C031739.2 vs. NCBI nr
Match: KGN57832.1 (hypothetical protein Csa_3G342350 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 6.6e-16
Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 0 

Query: 1  MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVIL 58
          MS+S SIVA VELKS+IEKFYGFF+NHV DL+NLFPDLYQ I LVEGQY S GSVIL
Sbjct: 1  MSRSDSIVAKVELKSNIEKFYGFFRNHVEDLMNLFPDLYQGIDLVEGQYLSAGSVIL 57

[Close]
BLAST of MELO3C031739.2 vs. NCBI nr
Match: XP_004149788.2 (PREDICTED: kirola-like [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 6.6e-16
Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 0 

Query: 1  MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVIL 58
          MS+S SIVA VELKS+IEKFYGFF+NHV DL+NLFPDLYQ I LVEGQY S GSVIL
Sbjct: 1  MSRSDSIVAKVELKSNIEKFYGFFRNHVEDLMNLFPDLYQGIDLVEGQYLSAGSVIL 57

[Close]
BLAST of MELO3C031739.2 vs. NCBI nr
Match: XP_022983395.1 (MLP-like protein 34 [Cucurbita maxima])

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 1   MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVIL 58
           MS+S SI A ++LKS  EKFYGFF+NH+GDLVNLFP+ Y+SI LVEGQ+FS G+V+L
Sbjct: 164 MSKSDSIWAKIDLKSSPEKFYGFFRNHLGDLVNLFPENYRSIQLVEGQHFSGGNVVL 220

[Close]
BLAST of MELO3C031739.2 vs. NCBI nr
Match: BAX08652.1 (major latex-like protein [Cucurbita ficifolia])

HSP 1 Score: 79.7 bits (195), Expect = 4.4e-12
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVIL 58
          MS+S SI A V+LKS  EKFYGFF+NH+GDLVNL P+ Y+SI LVEGQ+FS G+V+L
Sbjct: 1  MSKSDSIWAKVDLKSSPEKFYGFFRNHLGDLVNLIPENYKSIQLVEGQHFSGGNVVL 57

[Close]
BLAST of MELO3C031739.2 vs. NCBI nr
Match: BAX08653.1 (major latex-like protein [Cucurbita ficifolia])

HSP 1 Score: 79.7 bits (195), Expect = 4.4e-12
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVIL 58
          MS+S SI A V+LKS  EKFYGFF+NH+GDLVNL P+ Y+SI LVEGQ+FS G+V+L
Sbjct: 1  MSKSDSIWAKVDLKSSPEKFYGFFRNHLGDLVNLIPENYKSIQLVEGQHFSGGNVVL 57

[Close]
BLAST of MELO3C031739.2 vs. TrEMBL
Match: tr|A0A0A0LAY7|A0A0A0LAY7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G342350 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.4e-16
Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 0 

Query: 1  MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVIL 58
          MS+S SIVA VELKS+IEKFYGFF+NHV DL+NLFPDLYQ I LVEGQY S GSVIL
Sbjct: 1  MSRSDSIVAKVELKSNIEKFYGFFRNHVEDLMNLFPDLYQGIDLVEGQYLSAGSVIL 57

[Close]
BLAST of MELO3C031739.2 vs. TrEMBL
Match: tr|A0A1V1G256|A0A1V1G256_9ROSI (Major latex-like protein OS=Cucurbita ficifolia OX=37645 GN=CfMLP1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-12
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVIL 58
          MS+S SI A V+LKS  EKFYGFF+NH+GDLVNL P+ Y+SI LVEGQ+FS G+V+L
Sbjct: 1  MSKSDSIWAKVDLKSSPEKFYGFFRNHLGDLVNLIPENYKSIQLVEGQHFSGGNVVL 57

[Close]
BLAST of MELO3C031739.2 vs. TrEMBL
Match: tr|A0A1V1FRQ1|A0A1V1FRQ1_9ROSI (Major latex-like protein OS=Cucurbita ficifolia OX=37645 GN=CfMLP2 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-12
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVIL 58
          MS+S SI A V+LKS  EKFYGFF+NH+GDLVNL P+ Y+SI LVEGQ+FS G+V+L
Sbjct: 1  MSKSDSIWAKVDLKSSPEKFYGFFRNHLGDLVNLIPENYKSIQLVEGQHFSGGNVVL 57

[Close]
BLAST of MELO3C031739.2 vs. TrEMBL
Match: tr|A0A1V1FYV0|A0A1V1FYV0_CUCMO (Major latex-like protein OS=Cucurbita moschata OX=3662 GN=CmMLP3 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-11
Identity = 36/56 (64.29%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 1  MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVI 57
          M +S SI A ++LKS  EKFYGFF+NH+GDLV+LFP+ Y+SI LVEGQ+FS G+V+
Sbjct: 1  MGKSDSIWAKIDLKSSPEKFYGFFRNHLGDLVDLFPENYKSIQLVEGQHFSGGNVV 56

[Close]
BLAST of MELO3C031739.2 vs. TrEMBL
Match: tr|A0A1V1G4S5|A0A1V1G4S5_CUCMO (Major latex-like protein OS=Cucurbita moschata OX=3662 GN=CmMLP2 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-11
Identity = 36/56 (64.29%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 1  MSQSYSIVAMVELKSHIEKFYGFFKNHVGDLVNLFPDLYQSIHLVEGQYFSVGSVI 57
          M +S SI A ++LKS  EKFYGFF+NH+GDLV+LFP+ Y+SI LVEGQ+FS G+V+
Sbjct: 1  MGKSDSIWAKIDLKSSPEKFYGFFRNHLGDLVDLFPENYKSIQLVEGQHFSGGTVV 56

The following BLAST results are available for this feature:
BLAST of MELO3C031739.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57832.16.6e-1680.70hypothetical protein Csa_3G342350 [Cucumis sativus][more]
XP_004149788.26.6e-1680.70PREDICTED: kirola-like [Cucumis sativus][more]
XP_022983395.11.2e-1268.42MLP-like protein 34 [Cucurbita maxima][more]
BAX08652.14.4e-1268.42major latex-like protein [Cucurbita ficifolia][more]
BAX08653.14.4e-1268.42major latex-like protein [Cucurbita ficifolia][more]
BLAST of MELO3C031739.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031739.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031739.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAY7|A0A0A0LAY7_CUCSA4.4e-1680.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G342350 PE=4 SV=1[more]
tr|A0A1V1G256|A0A1V1G256_9ROSI2.9e-1268.42Major latex-like protein OS=Cucurbita ficifolia OX=37645 GN=CfMLP1 PE=2 SV=1[more]
tr|A0A1V1FRQ1|A0A1V1FRQ1_9ROSI2.9e-1268.42Major latex-like protein OS=Cucurbita ficifolia OX=37645 GN=CfMLP2 PE=2 SV=1[more]
tr|A0A1V1FYV0|A0A1V1FYV0_CUCMO2.5e-1164.29Major latex-like protein OS=Cucurbita moschata OX=3662 GN=CmMLP3 PE=2 SV=1[more]
tr|A0A1V1G4S5|A0A1V1G4S5_CUCMO2.5e-1164.29Major latex-like protein OS=Cucurbita moschata OX=3662 GN=CmMLP2 PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009607response to biotic stimulus
GO:0006952defense response
Vocabulary: INTERPRO
TermDefinition
IPR000916Bet_v_I/MLP
IPR023393START-like_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031739.2.1MELO3C031739.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3DG3DSA:3.30.530.20coord: 1..70
e-value: 5.2E-10
score: 41.3
IPR000916Bet v I/Major latex proteinPFAMPF00407Bet_v_1coord: 4..61
e-value: 2.8E-5
score: 23.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C031739.2Cla013181Watermelon (97103) v1medwmB448
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031739.2Cucumber (Gy14) v2cgybmedB216
MELO3C031739.2Cucumber (Gy14) v1cgymedB338
MELO3C031739.2Cucurbita maxima (Rimu)cmamedB274
MELO3C031739.2Cucurbita maxima (Rimu)cmamedB496
MELO3C031739.2Cucurbita moschata (Rifu)cmomedB261
MELO3C031739.2Cucurbita moschata (Rifu)cmomedB483
MELO3C031739.2Cucurbita pepo (Zucchini)cpemedB630
MELO3C031739.2Cucurbita pepo (Zucchini)cpemedB694
MELO3C031739.2Wild cucumber (PI 183967)cpimedB240
MELO3C031739.2Cucumber (Chinese Long) v2cumedB239
MELO3C031739.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C031739.2Watermelon (Charleston Gray)medwcgB417
MELO3C031739.2Silver-seed gourdcarmedB0771
MELO3C031739.2Cucumber (Chinese Long) v3cucmedB247
MELO3C031739.2Watermelon (97103) v2medwmbB424