MELO3C031719.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031719.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionparamyosin-like
Locationchr06 : 14056716 .. 14056907 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATACGAGTTTCTGAGGCTTGACAGTCTTACTCATGATTCCATGGTCGACGAAGACAAGATTGAGGTTGATCGTAAAGGATTTGGGAAGAGGAAGGAACCAATCGAGGAGTCGAGAAAGATGGAGAGTGAGATTCAACAA

mRNA sequence

ATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATACGAGTTTCTGAGGCTTGACAGTCTTACTCATGATTCCATGGTCGACGAAGACAAGATTGAGGTTGATCGTAAAGGATTTGGGAAGAGGAAGGAACCAATCGAGGAGTCGAGAAAGATGGAGAGTGAGATTCAACAA

Coding sequence (CDS)

ATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATACGAGTTTCTGAGGCTTGACAGTCTTACTCATGATTCCATGGTCGACGAAGACAAGATTGAGGTTGATCGTAAAGGATTTGGGAAGAGGAAGGAACCAATCGAGGAGTCGAGAAAGATGGAGAGTGAGATTCAACAA

Protein sequence

MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKEPIEESRKMESEIQQ
Homology
[Close]
BLAST of MELO3C031719.2 vs. NCBI nr
Match: KGN53387.1 (hypothetical protein Csa_4G051390 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 8.2e-18
Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 1   MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKEPIEESRKMES 60
           MRKEIESKNKEYELLQSKYEFLRLD+LTH SMV++DK+EVD KGFGK KE  EE ++MES
Sbjct: 52  MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVDPKGFGKWKERFEELKEMES 111

Query: 61  EIQQ 65
           EIQQ
Sbjct: 112 EIQQ 115

[Close]
BLAST of MELO3C031719.2 vs. NCBI nr
Match: XP_011653209.1 (PREDICTED: TSA1-like protein [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 8.2e-18
Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 1   MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKEPIEESRKMES 60
           MRKEIESKNKEYELLQSKYEFLRLD+LTH SMV++DK+EVD KGFGK KE  EE ++MES
Sbjct: 58  MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVDPKGFGKWKERFEELKEMES 117

Query: 61  EIQQ 65
           EIQQ
Sbjct: 118 EIQQ 121

[Close]
BLAST of MELO3C031719.2 vs. NCBI nr
Match: XP_022942684.1 (uncharacterized protein LOC111447644 isoform X1 [Cucurbita moschata])

HSP 1 Score: 82.0 bits (201), Expect = 7.9e-13
Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 0 

Query: 1   MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKEPIEESRKMES 60
           MRKEIE+KNKEYELLQSKYEFLRLD LTH+SM+++DK  VD KGF K KE  EE ++ ES
Sbjct: 55  MRKEIENKNKEYELLQSKYEFLRLDILTHESMLEQDK--VDPKGFEKWKEIYEELKEKES 114

Query: 61  EIQQ 65
           EIQQ
Sbjct: 115 EIQQ 116

[Close]
BLAST of MELO3C031719.2 vs. NCBI nr
Match: XP_022942686.1 (uncharacterized protein LOC111447644 isoform X3 [Cucurbita moschata])

HSP 1 Score: 82.0 bits (201), Expect = 7.9e-13
Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 0 

Query: 1   MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKEPIEESRKMES 60
           MRKEIE+KNKEYELLQSKYEFLRLD LTH+SM+++DK  VD KGF K KE  EE ++ ES
Sbjct: 55  MRKEIENKNKEYELLQSKYEFLRLDILTHESMLEQDK--VDPKGFEKWKEIYEELKEKES 114

Query: 61  EIQQ 65
           EIQQ
Sbjct: 115 EIQQ 116

[Close]
BLAST of MELO3C031719.2 vs. NCBI nr
Match: XP_022942685.1 (uncharacterized protein LOC111447644 isoform X2 [Cucurbita moschata])

HSP 1 Score: 82.0 bits (201), Expect = 7.9e-13
Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 0 

Query: 1   MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKEPIEESRKMES 60
           MRKEIE+KNKEYELLQSKYEFLRLD LTH+SM+++DK  VD KGF K KE  EE ++ ES
Sbjct: 55  MRKEIENKNKEYELLQSKYEFLRLDILTHESMLEQDK--VDPKGFEKWKEIYEELKEKES 114

Query: 61  EIQQ 65
           EIQQ
Sbjct: 115 EIQQ 116

[Close]
BLAST of MELO3C031719.2 vs. TrEMBL
Match: tr|A0A0A0KYB9|A0A0A0KYB9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.4e-18
Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 1   MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKEPIEESRKMES 60
           MRKEIESKNKEYELLQSKYEFLRLD+LTH SMV++DK+EVD KGFGK KE  EE ++MES
Sbjct: 52  MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVDPKGFGKWKERFEELKEMES 111

Query: 61  EIQQ 65
           EIQQ
Sbjct: 112 EIQQ 115

[Close]
BLAST of MELO3C031719.2 vs. TrEMBL
Match: tr|A0A1S3BTI8|A0A1S3BTI8_CUCME (paramyosin-like OS=Cucumis melo OX=3656 GN=LOC103493113 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.4e-11
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 3   KEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKEPIEESRKMESEI 62
           KE+ +  KE ELLQ+KYEFLRLD+LT DSMV +DK+EVD K FGKRKE  EE ++ME +I
Sbjct: 54  KEV-TMRKEIELLQNKYEFLRLDTLTRDSMVQQDKVEVDPKRFGKRKETFEELKEMEGQI 113

Query: 63  QQ 65
           QQ
Sbjct: 114 QQ 114

[Close]
BLAST of MELO3C031719.2 vs. TrEMBL
Match: tr|A0A1S3BTW3|A0A1S3BTW3_CUCME (uncharacterized protein LOC103493114 OS=Cucumis melo OX=3656 GN=LOC103493114 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-09
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 0 

Query: 1   MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKE 51
           MRKEIES   EYELLQSKYEF+RL ++THDSMV +DK+EVD KGF K K+
Sbjct: 58  MRKEIESMKIEYELLQSKYEFMRLHNITHDSMVQQDKVEVDPKGFEKWKK 107

The following BLAST results are available for this feature:
BLAST of MELO3C031719.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53387.18.2e-1881.25hypothetical protein Csa_4G051390 [Cucumis sativus][more]
XP_011653209.18.2e-1881.25PREDICTED: TSA1-like protein [Cucumis sativus][more]
XP_022942684.17.9e-1373.44uncharacterized protein LOC111447644 isoform X1 [Cucurbita moschata][more]
XP_022942686.17.9e-1373.44uncharacterized protein LOC111447644 isoform X3 [Cucurbita moschata][more]
XP_022942685.17.9e-1373.44uncharacterized protein LOC111447644 isoform X2 [Cucurbita moschata][more]
BLAST of MELO3C031719.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031719.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031719.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KYB9|A0A0A0KYB9_CUCSA5.4e-1881.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1[more]
tr|A0A1S3BTI8|A0A1S3BTI8_CUCME8.4e-1166.13paramyosin-like OS=Cucumis melo OX=3656 GN=LOC103493113 PE=4 SV=1[more]
tr|A0A1S3BTW3|A0A1S3BTW3_CUCME1.6e-0972.00uncharacterized protein LOC103493114 OS=Cucumis melo OX=3656 GN=LOC103493114 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031719.2.1MELO3C031719.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..64

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031719.2Cucumber (Gy14) v2cgybmedB215
MELO3C031719.2Cucumber (Gy14) v1cgymedB144
MELO3C031719.2Cucurbita maxima (Rimu)cmamedB274
MELO3C031719.2Cucurbita maxima (Rimu)cmamedB496
MELO3C031719.2Cucurbita moschata (Rifu)cmomedB261
MELO3C031719.2Cucurbita moschata (Rifu)cmomedB483
MELO3C031719.2Cucurbita pepo (Zucchini)cpemedB630
MELO3C031719.2Cucurbita pepo (Zucchini)cpemedB694
MELO3C031719.2Wild cucumber (PI 183967)cpimedB239
MELO3C031719.2Cucumber (Chinese Long) v2cumedB238
MELO3C031719.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C031719.2Watermelon (Charleston Gray)medwcgB417
MELO3C031719.2Watermelon (97103) v1medwmB448
MELO3C031719.2Silver-seed gourdcarmedB0185
MELO3C031719.2Silver-seed gourdcarmedB0771
MELO3C031719.2Cucumber (Chinese Long) v3cucmedB246
MELO3C031719.2Watermelon (97103) v2medwmbB424
MELO3C031719.2Wax gourdmedwgoB531