MELO3C031701.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031701.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionHomogentisate phytyltransferase 2
Locationchr06 : 12475495 .. 12476188 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGTGTTGGCTATCCTGCAGTTATGGTAGCCTCTATAGTTCGAAGTTAGTTATTGAAAAATAGTGAAAATTCAGGGAAGTAAGTTATGGATGTGAGAGAGTGAGAGACATATGTTTCTAATCAAACCTATTTATGTTTTAGGGACTTAAACGATGGATAAGGGTTAGATGAATCTTAGAAATAAGTTATCCCTTGAGTATAGACATGGAGTGACCCAATTTTTAGAATTTGCCAAATTTTACATTGATGCTTACGGACGATTAAGGTGTCTATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGAGTGTGGAATGACATCTGCTCACTATTGGAATATCCCCCTACTACACAGAATGAGTGTATCATGGAGAGTCATTAAGCTATAGAGGTACAGAAAACTTTAAGGAAGGAACTAGTAGTAATCCTTTTAATGAAGGAATTAGTAGTACACAATTTAATGAAGAAGGTGATATCTTTGGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAGAGGAAATAAAGGAATTTCGTTTGGAAGATAAAATACCGATGAATGTTGGGGTAAATATAGATGAAGATACAACAAATAATATATTTCAGGACTTATTGAATCAAGCACGTAATGAGTTGTACCCCGATTGTTCTGAATTTTCATTGTTGAATTTTTTGGTTAAGTTGA

mRNA sequence

GTTGTGTTGGCTATCCTGCAGTTATGGGACTTAAACGATGGATAAGGGTTAGATGAATCTTAGAAATAAGTTATCCCTTGAGTATAGACATGGAGTGACCCAATTTTTAGAATTTGCCAAATTTTACATTGATGCTTACGGACGATTAAGGTGTCTATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGAGTGTGGAATGACATCTGCTCACTATTGGAATATCCCCCTACTACACAGAATGAGTGTATCATGGAGAGTCATTAAGCTATAGAGGTACAGAAAACTTTAAGGAAGGAACTAGTAGTAATCCTTTTAATGAAGGAATTAGTAGTACACAATTTAATGAAGAAGGTGATATCTTTGGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAGAGGAAATAAAGGAATTTCGTTTGGAAGATAAAATACCGATGAATGTTGGGGTAAATATAGATGAAGATACAACAAATAATATATTTCAGGACTTATTGAATCAAGCACGTAATGAGTTGTACCCCGATTGTTCTGAATTTTCATTGTTGAATTTTTTGGTTAAGTTGA

Coding sequence (CDS)

ATGCTAAATGATTTACAAGCCCCTATTGAACATGAAGAGGAAATAAAGGAATTTCGTTTGGAAGATAAAATACCGATGAATGTTGGGGTAAATATAGATGAAGATACAACAAATAATATATTTCAGGACTTATTGAATCAAGCACGTAATGAGTTGTACCCCGATTGTTCTGAATTTTCATTGTTGAATTTTTTGGTTAAGTTG

Protein sequence

MLNDLQAPIEHEEEIKEFRLEDKIPMNVGVNIDEDTTNNIFQDLLNQARNELYPDCSEFSLLNFLVKL
Homology
[Close]
BLAST of MELO3C031701.2 vs. NCBI nr
Match: XP_008455800.1 (PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 5.8e-06
Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 0 

Query: 1   MLNDLQAPIEHEEEIKEFRLEDKIPMNVGVNIDEDTTNNIFQDLLNQARNELYPDCSEFS 60
           +L DLQ  +   EE   F   D     V  ++DE  T+N+F++L+N+ARN LYP C++FS
Sbjct: 93  LLTDLQGSMIAREE--NFDDGDGFDDEVPEDVDEINTSNVFEELMNEARNPLYPGCTKFS 152

Query: 61  LLNFLVKL 69
            LNFLVKL
Sbjct: 153 SLNFLVKL 158

[Close]
BLAST of MELO3C031701.2 vs. TrEMBL
Match: tr|A0A1S3C1V3|A0A1S3C1V3_CUCME (uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.9e-06
Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 0 

Query: 1   MLNDLQAPIEHEEEIKEFRLEDKIPMNVGVNIDEDTTNNIFQDLLNQARNELYPDCSEFS 60
           +L DLQ  +   EE   F   D     V  ++DE  T+N+F++L+N+ARN LYP C++FS
Sbjct: 93  LLTDLQGSMIAREE--NFDDGDGFDDEVPEDVDEINTSNVFEELMNEARNPLYPGCTKFS 152

Query: 61  LLNFLVKL 69
            LNFLVKL
Sbjct: 153 SLNFLVKL 158

The following BLAST results are available for this feature:
BLAST of MELO3C031701.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455800.15.8e-0647.06PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo][more]
BLAST of MELO3C031701.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031701.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031701.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C1V3|A0A1S3C1V3_CUCME3.9e-0647.06uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0016740 transferase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031701.2.1MELO3C031701.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..68

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031701.2Watermelon (Charleston Gray)medwcgB413
MELO3C031701.2Watermelon (Charleston Gray)medwcgB417
MELO3C031701.2Watermelon (97103) v1medwmB448
MELO3C031701.2Watermelon (97103) v1medwmB472
MELO3C031701.2Silver-seed gourdcarmedB0220
MELO3C031701.2Silver-seed gourdcarmedB0307
MELO3C031701.2Silver-seed gourdcarmedB0384
MELO3C031701.2Cucumber (Chinese Long) v3cucmedB246
MELO3C031701.2Cucumber (Chinese Long) v3cucmedB566
MELO3C031701.2Watermelon (97103) v2medwmbB421
MELO3C031701.2Watermelon (97103) v2medwmbB424
MELO3C031701.2Wax gourdmedwgoB531
MELO3C031701.2Wax gourdmedwgoB558
MELO3C031701.2Cucumber (Gy14) v2cgybmedB215
MELO3C031701.2Cucumber (Gy14) v2cgybmedB492
MELO3C031701.2Cucumber (Gy14) v1cgymedB379
MELO3C031701.2Cucumber (Gy14) v1cgymedB412
MELO3C031701.2Cucurbita maxima (Rimu)cmamedB151
MELO3C031701.2Cucurbita maxima (Rimu)cmamedB346
MELO3C031701.2Cucurbita maxima (Rimu)cmamedB560
MELO3C031701.2Cucurbita maxima (Rimu)cmamedB777
MELO3C031701.2Cucurbita moschata (Rifu)cmomedB139
MELO3C031701.2Cucurbita moschata (Rifu)cmomedB332
MELO3C031701.2Cucurbita moschata (Rifu)cmomedB547
MELO3C031701.2Cucurbita moschata (Rifu)cmomedB774
MELO3C031701.2Cucurbita pepo (Zucchini)cpemedB234
MELO3C031701.2Cucurbita pepo (Zucchini)cpemedB481
MELO3C031701.2Cucurbita pepo (Zucchini)cpemedB764
MELO3C031701.2Wild cucumber (PI 183967)cpimedB239
MELO3C031701.2Wild cucumber (PI 183967)cpimedB552
MELO3C031701.2Cucumber (Chinese Long) v2cumedB238
MELO3C031701.2Cucumber (Chinese Long) v2cumedB534
MELO3C031701.2Melon (DHL92) v3.6.1medmedB091
MELO3C031701.2Bottle gourd (USVL1VR-Ls)lsimedB280
MELO3C031701.2Bottle gourd (USVL1VR-Ls)lsimedB384