MELO3C031691.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031691.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionHomogentisate phytyltransferase 2
Locationchr06 : 11818878 .. 11819764 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTTTTGGCTATCCTGCAGTTATGGTAGTCTGTTTGCATTGAATAACTTTATTGTTGATTTGAGATGGCTATCCTGCAGTTACGGTACCTTTTTTGTTTTGAATTTGTTTCTGTTTGGGATAGTCTCAAGGGGTGGTAGTAGGATAGCTTGTAAGGAGCATTGCTGTAAGGAGTTTAAACGATGCGAAGATTTTAAAGTATTTTGTTGTTAATAGTTAGGTTGTGTTGGCTATCCTGTAGCTATGATAGTCTCTGTAGTTTGAAGTTAGTTATTGAAAAATAGTGAAAATTCAGGGGAGTAATTTATAGATGTGAGAGAGTGAGGGATATATATTTCTAATCAAATATATTTATGTTTTAGGACTTAAACGATGGACAAGGGTTGGATAAAGCTTAGAAATAAGTTCTCCCTTGAGTATAGACAGGGAGTGACCTAATTTTTAGAATTTGCCAAGTTTCACGTTGATACCTACAGACGATTAAGGTGTCTATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTGGAACGATATCTACTGGCTATTGGAATATCCCCTACTACACAGAATATGTGTATCATAGAGAGTCATTAAGCTTTAGAGGTACAAAAAACTTTGAGAAAGGAACTAGTAGTAGTCAATTTAATGAAGAAGGTAATATGTTTGGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAGAGGAAACAGAGGAACTTCGTTTGGAAGATGAAATGCTAATGAATGTTAGGGTAGATATAGATGAAGATAGAACAAACAATATATTTCAGGACTTATTGAATAAAGCACGTAATGAGTTGTACCCTGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTGA

mRNA sequence

ATTTTTTTTGGCTATCCTGCAGTTATGGACTTAAACGATGGACAAGGGTTGGATAAAGCTTAGAAATAAGTTCTCCCTTGAGTATAGACAGGGAGTGACCTAATTTTTAGAATTTGCCAAGTTTCACGTTGATACCTACAGACGATTAAGGTGTCTATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTGGAACGATATCTACTGGCTATTGGAATATCCCCTACTACACAGAATATGTGTATCATAGAGAGTCATTAAGCTTTAGAGGTACAAAAAACTTTGAGAAAGGAACTAGTAGTAGTCAATTTAATGAAGAAGGTAATATGTTTGGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAGAGGAAACAGAGGAACTTCGTTTGGAAGATGAAATGCTAATGAATGTTAGGGTAGATATAGATGAAGATAGAACAAACAATATATTTCAGGACTTATTGAATAAAGCACGTAATGAGTTGTACCCTGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTGA

Coding sequence (CDS)

ATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTGGAACGATATCTACTGGCTATTGGAATATCCCCTACTACACAGAATATGTGTATCATAGAGAGTCATTAAGCTTTAGAGGTACAAAAAACTTTGAGAAAGGAACTAGTAGTAGTCAATTTAATGAAGAAGGTAATATGTTTGGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAGAGGAAACAGAGGAACTTCGTTTGGAAGATGAAATGCTAATGAATGTTAGGGTAGATATAGATGAAGATAGAACAAACAATATATTTCAGGACTTATTGAATAAAGCACGTAATGAGTTGTACCCTGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTG

Protein sequence

MQEMFEFKLELIRGCGTISTGYWNIPYYTEYVYHRESLSFRGTKNFEKGTSSSQFNEEGNMFGMLNDLQAPIEHEEETEELRLEDEMLMNVRVDIDEDRTNNIFQDLLNKARNELYPGCSEFSSLNFLVKL
Homology
[Close]
BLAST of MELO3C031691.2 vs. NCBI nr
Match: XP_008455800.1 (PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo])

HSP 1 Score: 73.2 bits (178), Expect = 7.5e-10
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 0 

Query: 28  YTEYVYHRESLSFRGTKNFEKGTSSSQ----------FNEEGNMFGMLNDLQAPIEHEEE 87
           Y ++VYH E+ +      FE+G SSS+           +E+ ++  +L DLQ  +   EE
Sbjct: 50  YNKWVYHGEATNL---ARFERGASSSEGERLSRESNIGDEDDDILDLLTDLQGSMIAREE 109

Query: 88  T--EELRLEDEMLMNVRVDIDEDRTNNIFQDLLNKARNELYPGCSEFSSLNFLVKL 132
              +    +DE    V  D+DE  T+N+F++L+N+ARN LYPGC++FSSLNFLVKL
Sbjct: 110 NFDDGDGFDDE----VPEDVDEINTSNVFEELMNEARNPLYPGCTKFSSLNFLVKL 158

[Close]
BLAST of MELO3C031691.2 vs. NCBI nr
Match: XP_011658420.1 (PREDICTED: GDSL esterase/lipase At5g45920-like [Cucumis sativus])

HSP 1 Score: 53.9 bits (128), Expect = 4.7e-04
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 47 EKGTSSSQFNEEGNMFGMLNDLQAPIEHEEETEELRLEDEMLMNV 92
          ++GT S+ F+EE  MFGMLNDLQAPIEHE+E EE  LE+E+  N+
Sbjct: 3  DEGTISNPFDEEDEMFGMLNDLQAPIEHEQEIEE-GLENEITFNI 46

[Close]
BLAST of MELO3C031691.2 vs. TrEMBL
Match: tr|A0A1S3C1V3|A0A1S3C1V3_CUCME (uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.0e-10
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 0 

Query: 28  YTEYVYHRESLSFRGTKNFEKGTSSSQ----------FNEEGNMFGMLNDLQAPIEHEEE 87
           Y ++VYH E+ +      FE+G SSS+           +E+ ++  +L DLQ  +   EE
Sbjct: 50  YNKWVYHGEATNL---ARFERGASSSEGERLSRESNIGDEDDDILDLLTDLQGSMIAREE 109

Query: 88  T--EELRLEDEMLMNVRVDIDEDRTNNIFQDLLNKARNELYPGCSEFSSLNFLVKL 132
              +    +DE    V  D+DE  T+N+F++L+N+ARN LYPGC++FSSLNFLVKL
Sbjct: 110 NFDDGDGFDDE----VPEDVDEINTSNVFEELMNEARNPLYPGCTKFSSLNFLVKL 158

The following BLAST results are available for this feature:
BLAST of MELO3C031691.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455800.17.5e-1040.52PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo][more]
XP_011658420.14.7e-0462.22PREDICTED: GDSL esterase/lipase At5g45920-like [Cucumis sativus][more]
BLAST of MELO3C031691.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031691.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031691.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C1V3|A0A1S3C1V3_CUCME5.0e-1040.52uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0016740 transferase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031691.2.1MELO3C031691.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031691.2Cucumber (Gy14) v2cgybmedB215
MELO3C031691.2Cucurbita maxima (Rimu)cmamedB346
MELO3C031691.2Cucurbita maxima (Rimu)cmamedB777
MELO3C031691.2Cucurbita moschata (Rifu)cmomedB332
MELO3C031691.2Cucurbita moschata (Rifu)cmomedB774
MELO3C031691.2Cucurbita pepo (Zucchini)cpemedB234
MELO3C031691.2Cucurbita pepo (Zucchini)cpemedB481
MELO3C031691.2Wild cucumber (PI 183967)cpimedB239
MELO3C031691.2Cucumber (Chinese Long) v2cumedB238
MELO3C031691.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C031691.2Watermelon (Charleston Gray)medwcgB417
MELO3C031691.2Watermelon (97103) v1medwmB448
MELO3C031691.2Silver-seed gourdcarmedB0384
MELO3C031691.2Silver-seed gourdcarmedB0661
MELO3C031691.2Cucumber (Chinese Long) v3cucmedB246
MELO3C031691.2Watermelon (97103) v2medwmbB424
MELO3C031691.2Wax gourdmedwgoB531