MELO3C031659.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031659.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Locationchr06 : 9068618 .. 9068932 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACACAAACACAGAGCGAGACTGGTTACGTTAGTCCGATGATGATGATGCCAACATTTGAAACGAGATATTATGATTTAGGAGTCGGTCAATCGTCAAACTTTGGAATAGGATATTACAATATGGAGGTAGGTCCATCATCGTCAAACTTTAGGTAAGGATACTATGATTTAGAGACTGATCCATCATCTTCATAATGAATATTTATATTATGAAGTGTCGACAATAGTACTCGAGCAACCAAATGACCAACAACAACAAGAGAATCATGAGGGCTAGAGCAACAAAGGGTGCAGAGTCGACAACGACAACTAG

mRNA sequence

TGACACAAACACAGAGCGAGACTGGTTACGTTAGTCCGATGATGATGATGCCAACATTTGAAACGAGATATTATGATTTAGGAGTCGGTCAATCGTCAAACTTTGGAATAGGATATTACAATATGGAGGTAGGTCCATCATCGTCAAACTTTAGGTAAGGATACTATGATTTAGAGACTGATCCATCATCTTCATAATGAATATTTATATTATGAAGTGTCGACAATAGTACTCGAGCAACCAAATGACCAACAACAACAAGAGAATCATGAGGGCTAGAGCAACAAAGGGTGCAGAGTCGACAACGACAACTAG

Coding sequence (CDS)

ATGATGATGATGCCAACATTTGAAACGAGATATTATGATTTAGGAGTCGGTCAATCGTCAAACTTTGGAATAGGATATTACAATATGGAGGTAGGTCCATCATCGTCAAACTTTAGGTAA

Protein sequence

MMMMPTFETRYYDLGVGQSSNFGIGYYNMEVGPSSSNFR
Homology
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BLAST of MELO3C031659.2 vs. NCBI nr
Match: XP_011652738.1 (PREDICTED: uncharacterized protein LOC105435074 [Cucumis sativus])

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-05
Identity = 27/38 (71.05%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 1   MMMMPTFETRYYDLGVGQSSNFGIGYYNMEVGPSSSNF 39
           +MMMPTF T YYD GVGQSS+F   YYN E G SSSNF
Sbjct: 197 VMMMPTFGTTYYDYGVGQSSDFRTWYYNSEAGSSSSNF 234

The following BLAST results are available for this feature:
BLAST of MELO3C031659.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652738.11.7e-0571.05PREDICTED: uncharacterized protein LOC105435074 [Cucumis sativus][more]
BLAST of MELO3C031659.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031659.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031659.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031659.2.1MELO3C031659.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031659.2Cucumber (Gy14) v2cgybmedB215
MELO3C031659.2Cucumber (Gy14) v2cgybmedB356
MELO3C031659.2Cucumber (Gy14) v1cgymedB002
MELO3C031659.2Cucumber (Gy14) v1cgymedB365
MELO3C031659.2Cucurbita maxima (Rimu)cmamedB321
MELO3C031659.2Cucurbita maxima (Rimu)cmamedB347
MELO3C031659.2Cucurbita maxima (Rimu)cmamedB433
MELO3C031659.2Cucurbita moschata (Rifu)cmomedB306
MELO3C031659.2Cucurbita moschata (Rifu)cmomedB334
MELO3C031659.2Cucurbita moschata (Rifu)cmomedB422
MELO3C031659.2Cucurbita moschata (Rifu)cmomedB650
MELO3C031659.2Cucurbita pepo (Zucchini)cpemedB051
MELO3C031659.2Cucurbita pepo (Zucchini)cpemedB210
MELO3C031659.2Cucurbita pepo (Zucchini)cpemedB236
MELO3C031659.2Cucurbita pepo (Zucchini)cpemedB837
MELO3C031659.2Wild cucumber (PI 183967)cpimedB239
MELO3C031659.2Wild cucumber (PI 183967)cpimedB401
MELO3C031659.2Cucumber (Chinese Long) v2cumedB238
MELO3C031659.2Cucumber (Chinese Long) v2cumedB393
MELO3C031659.2Melon (DHL92) v3.6.1medmedB015
MELO3C031659.2Bottle gourd (USVL1VR-Ls)lsimedB038
MELO3C031659.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C031659.2Watermelon (Charleston Gray)medwcgB411
MELO3C031659.2Watermelon (Charleston Gray)medwcgB417
MELO3C031659.2Watermelon (97103) v1medwmB448
MELO3C031659.2Watermelon (97103) v1medwmB470
MELO3C031659.2Silver-seed gourdcarmedB0519
MELO3C031659.2Silver-seed gourdcarmedB0552
MELO3C031659.2Silver-seed gourdcarmedB0976
MELO3C031659.2Cucumber (Chinese Long) v3cucmedB246
MELO3C031659.2Cucumber (Chinese Long) v3cucmedB410
MELO3C031659.2Watermelon (97103) v2medwmbB413
MELO3C031659.2Watermelon (97103) v2medwmbB424
MELO3C031659.2Wax gourdmedwgoB519
MELO3C031659.2Wax gourdmedwgoB531