MELO3C031615.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031615.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRING-type E3 ubiquitin transferase
Locationchr06 : 1607812 .. 1609289 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAACATCTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGCGAAGGTGTGTTCCTTGTCTTTTTAACCTATTTTCGTAATGGTGTTTTTTTATTTTGTAAATTATTTCTAATATATACTGTTTCAACTTTTAAAGGATTCGATTCTGCATTCAAAAAAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAACCCCACGGTGGGCGAAGGTGATGTTCCTTGTCTTTGTAACCTATTTCGTAATAGTGTTCTCTTATTGTGTAGATTATTTCTAATATATGCTCTTTCAATATGTAAGGGATTGGATTCTCCACTCAAAACGGTATAGCGCAAGGCTCTTGGGTTCGAACCACACGGTGGGCCAAGGTGTTGTTCCATGATTTTTTAACCTATGGTGCTTTATTATTTTGTAAATTATTTCTAATGTATTAATGTCAATTTGGAAAAGGTATGCTTTTGCATCCAAAACTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGAAGGTAAATTTTTTTAAAATTTCACTTTTTATTACTCTTATGTAAGTTATGCCTTTTTGTTTAAAATTCTCTTCCCAACTAAGGATGAGAGGCCAACTTAAACATATCTTAAACTAATTATTAAAACACAAAAATGTTGAAGGTTTAAATCCCTCCTACCACGTAATGTGTGGGGAAAAAAAATGGAAGAAGCTAGAACAAATCTCTATTCTTTTTAATCTTAAATTAAGATAGTGTATGAGAGGTTTATTTGCAGTATTTCAAGAGAGGATGCTATTGGATTTTATAAACTCTGACATTTAATGCTAAATAAGAGCATATAACATGTGTTAATATTCCCTTAAACTGCTATGTATTTATCTATTTTTCGTATTTAAAAGAAATTTTTTTTTAAATTTTCCAAATTTTCTCGATGTAATTTTTAATCTGTGGTATTTTTAGTAATATGAACAAACTATTTGGATTAAATTTAATTATTGGTCACTCTTTCTAAAACATAAAAAAAGTTAAAATTTAATTAGGCGATGTCTAAGTTCTGTCCATTTCATGCATCAATCCAAGCCATCTAGCTTAGTCGGTAGAGTGCAAGGCTCTTGACTTGTGGTTGTGGGTTTGAACCCTGCGGTGGGCGTGTTTTTTATTCCTAATCCTTATATTTTATTGCAGTAAAAATTATTTAAAAATAGAACGTACACGAATTTTACGAAAGAGATTGACACCATCTTTATCTTTTTTCTCTTTTTGGGTGTTAGTCGAGTTAATCCAATTTTGTTGAAAGATAGTCATAATCGTGTTGACACCATCTTTATCTTTTTTCTTTTTAGGTGTTAGTCGAGTTAATCCAATTTTGTTGAAAGAGTCATAA

mRNA sequence

ATGCTAACATCTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGATTCGATTCTGCATTCAAAAAAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAACCCCACGGTGGGCGAAGGGATTGGATTCTCCACTCAAAACGGTATAGCGCAAGGCTCTTGGGTTCGAACCACACGGTATGCTTTTGCATCCAAAACTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGAAGGTGTTAGTCGAGTTAATCCAATTTTGTTGAAAGAGTCATAA

Coding sequence (CDS)

ATGCTAACATCTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGATTCGATTCTGCATTCAAAAAAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAACCCCACGGTGGGCGAAGGGATTGGATTCTCCACTCAAAACGGTATAGCGCAAGGCTCTTGGGTTCGAACCACACGGTATGCTTTTGCATCCAAAACTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGAAGGTGTTAGTCGAGTTAATCCAATTTTGTTGAAAGAGTCATAA

Protein sequence

MLTSARLAQSVERKALNLVVVGFDSAFKKARLAQSVERKALNLVVVGSNPTVGEGIGFSTQNGIAQGSWVRTTRYAFASKTARLAQLVERKALNLVVVGSSPTVGEGVSRVNPILLKES
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C031615.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031615.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031615.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031615.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031615.2.1MELO3C031615.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C031615.2CsGy3G009650Cucumber (Gy14) v2cgybmedB201
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031615.2Cucumber (Gy14) v2cgybmedB352
MELO3C031615.2Cucumber (Gy14) v2cgybmedB430
MELO3C031615.2Cucumber (Gy14) v1cgymedB432
MELO3C031615.2Cucumber (Gy14) v1cgymedB499
MELO3C031615.2Cucumber (Gy14) v1cgymedB592
MELO3C031615.2Cucurbita maxima (Rimu)cmamedB273
MELO3C031615.2Cucurbita maxima (Rimu)cmamedB863
MELO3C031615.2Cucurbita maxima (Rimu)cmamedB951
MELO3C031615.2Cucurbita moschata (Rifu)cmomedB260
MELO3C031615.2Cucurbita moschata (Rifu)cmomedB857
MELO3C031615.2Cucurbita moschata (Rifu)cmomedB941
MELO3C031615.2Cucurbita pepo (Zucchini)cpemedB372
MELO3C031615.2Cucurbita pepo (Zucchini)cpemedB693
MELO3C031615.2Cucurbita pepo (Zucchini)cpemedB951
MELO3C031615.2Wild cucumber (PI 183967)cpimedB224
MELO3C031615.2Wild cucumber (PI 183967)cpimedB396
MELO3C031615.2Wild cucumber (PI 183967)cpimedB483
MELO3C031615.2Cucumber (Chinese Long) v2cumedB223
MELO3C031615.2Cucumber (Chinese Long) v2cumedB389
MELO3C031615.2Cucumber (Chinese Long) v2cumedB474
MELO3C031615.2Melon (DHL92) v3.6.1medmedB017
MELO3C031615.2Melon (DHL92) v3.6.1medmedB051
MELO3C031615.2Bottle gourd (USVL1VR-Ls)lsimedB035
MELO3C031615.2Bottle gourd (USVL1VR-Ls)lsimedB396
MELO3C031615.2Watermelon (Charleston Gray)medwcgB416
MELO3C031615.2Watermelon (Charleston Gray)medwcgB435
MELO3C031615.2Watermelon (97103) v1medwmB447
MELO3C031615.2Watermelon (97103) v1medwmB466
MELO3C031615.2Watermelon (97103) v1medwmB473
MELO3C031615.2Silver-seed gourdcarmedB0500
MELO3C031615.2Silver-seed gourdcarmedB0629
MELO3C031615.2Cucumber (Chinese Long) v3cucmedB230
MELO3C031615.2Cucumber (Chinese Long) v3cucmedB405
MELO3C031615.2Cucumber (Chinese Long) v3cucmedB493
MELO3C031615.2Watermelon (97103) v2medwmbB408
MELO3C031615.2Watermelon (97103) v2medwmbB423
MELO3C031615.2Watermelon (97103) v2medwmbB439
MELO3C031615.2Wax gourdmedwgoB524
MELO3C031615.2Wax gourdmedwgoB545