MELO3C031453.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031453.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionsubtilisin-like protease SBT3.17 isoform X1
Locationchr05 : 18715692 .. 18716063 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCCTGATGATTTGATGGGAACAAGAACCCTTCGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACATCCAGGACATGCCACAGATAGTGGGGACATAGTTCATATTGCCATTGAGTATGGAAATGAACAACTGAATCGCATTGTTGAATGGCCTATCTTACAACGTCAAGACGCAAGCCAAACACGTCAAGAGGTTGTTCAACAATTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGTGTAACATCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACTCGTTCTGCAGCATCATTCTTCAAAAAAACCGATGA

mRNA sequence

ATGTCGCCTGATGATTTGATGGGAACAAGAACCCTTCGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACATCCAGGACATGCCACAGATAGTGGGGACATAGTTCATATTGCCATTGAGTATGGAAATGAACAACTGAATCGCATTGTTGAATGGCCTATCTTACAACGTCAAGACGCAAGCCAAACACGTCAAGAGGTTGTTCAACAATTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGTGTAACATCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACTCGTTCTGCAGCATCATTCTTCAAAAAAACCGATGA

Coding sequence (CDS)

ATGTCGCCTGATGATTTGATGGGAACAAGAACCCTTCGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACATCCAGGACATGCCACAGATAGTGGGGACATAGTTCATATTGCCATTGAGTATGGAAATGAACAACTGAATCGCATTGTTGAATGGCCTATCTTACAACGTCAAGACGCAAGCCAAACACGTCAAGAGGTTGTTCAACAATTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGTGTAACATCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACTCGTTCTGCAGCATCATTCTTCAAAAAAACCGATGA

Protein sequence

MSPDDLMGTRTLRVSERRNVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQRQDASQTRQEVVQQLEAIPELTLMDRCRLMRILMCNIDDMKAFLEVPDNMKYSFCSIILQKNR
Homology
[Close]
BLAST of MELO3C031453.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51
Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 0 

Query: 1   MSPDDLMGTRTLRVSERRNVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQ 60
           MSPDDLM TRT RVSERRNVSSGSKRK PGHATDSGDIV  AIEYGNEQL+RI EWPILQ
Sbjct: 535 MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQ 594

Query: 61  RQDASQTRQEVVQQLEAIPELTLMDRCRLMRILMCNIDDMKAFLEVPDNMKYSFCSIILQ 120
           RQDA+QTRQE+V+ LEAIPELTLMDRCRLMRILM N+DDMKAFLEVPD+MKY +CS+ILQ
Sbjct: 595 RQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQ 654

Query: 121 KNR 124
           +N+
Sbjct: 655 ENQ 657

[Close]
BLAST of MELO3C031453.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 4.3e-23
Identity = 67/116 (57.76%), Postives = 80/116 (68.97%), Query Frame = 0 

Query: 1   MSPDDLMGTRTLRVSERRNVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQ 60
           MSPDDLM TRT RVSERRNVSSGS+RKH GHATDSGDIV  AI YGNEQL+RI EWPILQ
Sbjct: 171 MSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEWPILQ 230

Query: 61  RQDASQTRQEV--VQQLEAIPELTLMDRCRLMRILMCNIDDMKAFLEVP--DNMKY 113
           RQDA+QT QE+  +++ + +P      R R     +  +D     + VP  D  +Y
Sbjct: 231 RQDATQTCQEIELLKKPQPVPNDCTDQRWRWFENCLGALDGTYIKVNVPASDRARY 286

[Close]
BLAST of MELO3C031453.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 4.1e-18
Identity = 49/120 (40.83%), Postives = 78/120 (65.00%), Query Frame = 0 

Query: 1   MSPDDLMGTRTLRVSERRNVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQ 60
           MSPD++ G R  + SERRN SS SKRK      ++ +++   +E+GNEQL  I +WP  +
Sbjct: 184 MSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEK 243

Query: 61  RQDASQTRQEVVQQLEAIPELTLMDRCRLMRILMCNIDDMKAFLEVPDNMKYSFCSIILQ 120
           R    + R +VV+QL+ IP+L   DR +LM+IL  +++ ++ FL +P  +K  +C+I+LQ
Sbjct: 244 RAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQ 303

[Close]
BLAST of MELO3C031453.2 vs. NCBI nr
Match: KGN46631.1 (hypothetical protein Csa_6G116150 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 8.6e-16
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 0 

Query: 1   MSPDDLMGTRTLRVSERRNVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQ 60
           M PD+++GTR  + SE RN SSGSKRKH G   ++ D++   +E  N+QL  I  W   +
Sbjct: 8   MPPDEMLGTR--QSSEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAIANWSKEK 67

Query: 61  RQDASQTRQEVVQQLEAIPELTLMDRCRLMRILMCNIDDMKAFLEVPDNMKYSFCSIILQ 120
           R    +   EVV+QL+ I EL   DR +LM+I+   +DD++ FL  P  +K  +C ++L+
Sbjct: 68  RATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCPTKLKLEYCRVLLE 127

Query: 121 KN 123
            N
Sbjct: 128 DN 127

[Close]
BLAST of MELO3C031453.2 vs. NCBI nr
Match: KGN58436.1 (hypothetical protein Csa_3G643760 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 9.5e-15
Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 0 

Query: 19  NVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQRQDASQTRQEVVQQLEAI 78
           N SS SKRK  G   ++  I+   ++Y N+Q   IVEWP +Q Q       EV++QL+AI
Sbjct: 2   NASSRSKRKRGGQTAETMKIIRNTMKYVNDQSEAIVEWPSVQHQSKDAFYAEVMKQLQAI 61

Query: 79  PELTLMDRCRLMRILMCNIDDMKAFLEVPDNMKYSFCSIILQKN 123
           PEL+  DR  LM  LMCN+ DMKA  E+ + +K  +C+++L+ N
Sbjct: 62  PELSTHDRRCLMWTLMCNVHDMKALWEISNELKLDYCTVMLEDN 105

[Close]
BLAST of MELO3C031453.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 0 

Query: 1   MSPDDLMGTRTLRVSERRNVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQ 60
           MSPDDLM TRT RVSERRNVSSGSKRK PGHATDSGDIV  AIEYGNEQL+RI EWPILQ
Sbjct: 535 MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQ 594

Query: 61  RQDASQTRQEVVQQLEAIPELTLMDRCRLMRILMCNIDDMKAFLEVPDNMKYSFCSIILQ 120
           RQDA+QTRQE+V+ LEAIPELTLMDRCRLMRILM N+DDMKAFLEVPD+MKY +CS+ILQ
Sbjct: 595 RQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQ 654

Query: 121 KNR 124
           +N+
Sbjct: 655 ENQ 657

[Close]
BLAST of MELO3C031453.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-23
Identity = 67/116 (57.76%), Postives = 80/116 (68.97%), Query Frame = 0 

Query: 1   MSPDDLMGTRTLRVSERRNVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQ 60
           MSPDDLM TRT RVSERRNVSSGS+RKH GHATDSGDIV  AI YGNEQL+RI EWPILQ
Sbjct: 171 MSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEWPILQ 230

Query: 61  RQDASQTRQEV--VQQLEAIPELTLMDRCRLMRILMCNIDDMKAFLEVP--DNMKY 113
           RQDA+QT QE+  +++ + +P      R R     +  +D     + VP  D  +Y
Sbjct: 231 RQDATQTCQEIELLKKPQPVPNDCTDQRWRWFENCLGALDGTYIKVNVPASDRARY 286

[Close]
BLAST of MELO3C031453.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-18
Identity = 49/120 (40.83%), Postives = 78/120 (65.00%), Query Frame = 0 

Query: 1   MSPDDLMGTRTLRVSERRNVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQ 60
           MSPD++ G R  + SERRN SS SKRK      ++ +++   +E+GNEQL  I +WP  +
Sbjct: 184 MSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEK 243

Query: 61  RQDASQTRQEVVQQLEAIPELTLMDRCRLMRILMCNIDDMKAFLEVPDNMKYSFCSIILQ 120
           R    + R +VV+QL+ IP+L   DR +LM+IL  +++ ++ FL +P  +K  +C+I+LQ
Sbjct: 244 RAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQ 303

[Close]
BLAST of MELO3C031453.2 vs. TrEMBL
Match: tr|A0A0A0KFW0|A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.7e-16
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 0 

Query: 1   MSPDDLMGTRTLRVSERRNVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQ 60
           M PD+++GTR  + SE RN SSGSKRKH G   ++ D++   +E  N+QL  I  W   +
Sbjct: 8   MPPDEMLGTR--QSSEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAIANWSKEK 67

Query: 61  RQDASQTRQEVVQQLEAIPELTLMDRCRLMRILMCNIDDMKAFLEVPDNMKYSFCSIILQ 120
           R    +   EVV+QL+ I EL   DR +LM+I+   +DD++ FL  P  +K  +C ++L+
Sbjct: 68  RATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCPTKLKLEYCRVLLE 127

Query: 121 KN 123
            N
Sbjct: 128 DN 127

[Close]
BLAST of MELO3C031453.2 vs. TrEMBL
Match: tr|A0A0A0LEB9|A0A0A0LEB9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G643760 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.3e-15
Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 0 

Query: 19  NVSSGSKRKHPGHATDSGDIVHIAIEYGNEQLNRIVEWPILQRQDASQTRQEVVQQLEAI 78
           N SS SKRK  G   ++  I+   ++Y N+Q   IVEWP +Q Q       EV++QL+AI
Sbjct: 2   NASSRSKRKRGGQTAETMKIIRNTMKYVNDQSEAIVEWPSVQHQSKDAFYAEVMKQLQAI 61

Query: 79  PELTLMDRCRLMRILMCNIDDMKAFLEVPDNMKYSFCSIILQKN 123
           PEL+  DR  LM  LMCN+ DMKA  E+ + +K  +C+++L+ N
Sbjct: 62  PELSTHDRRCLMWTLMCNVHDMKALWEISNELKLDYCTVMLEDN 105

The following BLAST results are available for this feature:
BLAST of MELO3C031453.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34114.11.7e-5184.55retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008459131.14.3e-2357.76PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo][more]
XP_008441954.14.1e-1840.83PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo][more]
KGN46631.18.6e-1640.16hypothetical protein Csa_6G116150 [Cucumis sativus][more]
KGN58436.19.5e-1543.27hypothetical protein Csa_3G643760 [Cucumis sativus][more]
BLAST of MELO3C031453.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031453.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031453.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GCB5|E5GCB5_CUCME1.1e-5184.55Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME2.8e-2357.76uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=... [more]
tr|A0A1S3B4L3|A0A1S3B4L3_CUCME2.7e-1840.83uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
tr|A0A0A0KFW0|A0A0A0KFW0_CUCSA5.7e-1640.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1[more]
tr|A0A0A0LEB9|A0A0A0LEB9_CUCSA6.3e-1543.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G643760 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031453.2.1MELO3C031453.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..34

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031453.2Cucumber (Gy14) v2cgybmedB118
MELO3C031453.2Cucumber (Gy14) v1cgymedB315
MELO3C031453.2Cucurbita maxima (Rimu)cmamedB190
MELO3C031453.2Cucurbita maxima (Rimu)cmamedB831
MELO3C031453.2Cucurbita moschata (Rifu)cmomedB181
MELO3C031453.2Cucurbita moschata (Rifu)cmomedB822
MELO3C031453.2Cucurbita pepo (Zucchini)cpemedB127
MELO3C031453.2Cucurbita pepo (Zucchini)cpemedB913
MELO3C031453.2Wild cucumber (PI 183967)cpimedB132
MELO3C031453.2Cucumber (Chinese Long) v2cumedB132
MELO3C031453.2Bottle gourd (USVL1VR-Ls)lsimedB123
MELO3C031453.2Watermelon (Charleston Gray)medwcgB362
MELO3C031453.2Watermelon (97103) v1medwmB411
MELO3C031453.2Silver-seed gourdcarmedB0005
MELO3C031453.2Silver-seed gourdcarmedB0172
MELO3C031453.2Cucumber (Chinese Long) v3cucmedB134
MELO3C031453.2Watermelon (97103) v2medwmbB360
MELO3C031453.2Wax gourdmedwgoB456