MELO3C031407.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031407.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Type i inositol polyphosphate 5-phosphatase 2
Location	chr05 : 14241896 .. 14244375 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACATGCATGGAAAGCGAACATCAACTTAAGAGAAAAACAAACAATCATGCAAGTATGTAGGTGATGCTTTTCTAACCAATCAACCAAGCCACATTACTCACATTCTAAGAAATTGGCTTTTTAATAATCCTTTAGGATAGTCCATTTTAAATAGGCTATTCAAAATGTGAGGAGAAAATACCTTCAATTGAAAAATAAAAGGGTTTCCTCAAAATTTCACCAAATTATTTTTTCCGCCTTTCACCTCTCAAACTTCAGAAACCCTCATTTCATTCCCCTCTGCTCTCAAACTTTAGAGACCCATTGCCATCTTTCTGTCGCTCTCTTCCCCATTGTCATCTCTCCGTCGCTCTCTTCTACTCACCATCTCTCTCTTTCGTCTTCTATCACGCCACGGCCGATAAGCTATTCACTCGCACATCGACGGGGAACCTCTGTTTTTGATACCCCAAGAACTTTATTGCCTAGCCACTCCTTTGCATAGTTTAACTTGCCGGACGTGACAGCATGCAATGCCACTACTCCGCACCTAACGTTTGTGGCAAAACCACATTTACTTCTGAAAGTTGAACCATAATGTCGAATCCCTCTCGTGTTAAGATCTATCGTTGATAAAGCTCGTTCTACGCCATTAGAGCTATTGTGGGTATGTTTTTGTGAGTATTTATGGTTTTCCTAGGATTGTTTTATACCAATATGCTTTTGACTCAAATTAGTTTATAACTCTTCTCGTTTCATTTTTTCCATTTTTGGTTAATCAAGAAATTTTCTCTATATCAAGGAAAATCAGTCCAAGAGTATTTTATGTTGATCCATGTTTTTTTTTCACCTATGGTCCTACTAGCATTCAATGAGTATGTCACAACTATTGTTTTAAAAGTTAAATGATCGATTATTTATTTTAATGGTCCAGACGTTCAAGTTTAGTACATAAACACCAAAAATCTGAAGTTCGATTGTGAACTACACTATTTGATTCATGACCCCGGGGATGTTTCTTTTCTTCACACTGATTTTTGGAAATATGATTTTCTATAGGGTAACAGTAGCTACATGGAATGTTGCAGCCAGAATTTCGGAGGAAGATCTTGAGATAAATGATTGGCTCTGCACAGAAGACAACGAAGATGTTTATATTATAGGGTGAGAGAAGATCCTCATCCTCATGTTTCCAAATTCCAATAGTTTATATCTTGTGAGTTACTAAAGTGGATATTTTACTGAATATGCTTTATTGCTATGGAAAATCCTCTGCATGCTGAAGCATATAGTATCTCTATATTTCTTAAATAATCCAAGTTACATCATGTCCATTTTTTCGGGTTGAATTACAAAGTTGGTCTTTATGGTTTAAAGAAAATTAGGCTTTTGTCCTTATGTGATTTTAAAAGTTAGAATTTAGTCCTTATAGTTTTACCATTTTACTGTAAGGTTTTTGTCATATGTAAGTGATTAGGCATTTTTTCAGTCAATCCTAAGTCATGGTAGAGACCAATTTTCTATTGAGAATTAAGTTTTTATGTTGTGGAGTCTCTGTAGAAACCAATAAGGACTTCTTTACTTCTAGTTCTTGCTTTGAACATAGTGTAATTGCCTCATAGAAAAGAATTAGTAAAAAAATATTCATGTCTTAGGCCCCCAAGTTTTGATTACTTTTTTGTTTGTAGTGTTGCTGTTTTAATTTTGATTTTTGTTATTGTTAGGAGTATTGGTTTTGGTTTTTTATCTGAACTTAGATAAATTGGATTTGGTTATTAAGTTTTTGGTTTTTTGCTCTAATTTTGTGCTCCATTCATTTAAGTTTCTTATGAATCTTTGCTCCCTAATGTTTTTAATACTTTTTTGTTCTCGTTGTTGCTGTTTTAATGTTTCATTTATGGTTTCTGGTTCCTTATCTCTGAACTTAAGTAATTTGAATTTTGTTTATATATGGCTAGAACTTGTTTTCTCTTATTGATAGTTTTGGTTGTGTATGGAATGAATGTTGTTTTAGCTTGACTAGAAGTAAGATTATTGGTTGTCTCCTATTATGTAAGGTTGTTATGACTTTCTTAAATAATATATAGGAGAAAATACTGGTCCAGAAAGAAATGTATTCTTTGTTGCTAGTTTTGATTGTGTATGGAATGAAAGTTTTGGGAAGTACCAATTGCATGACCATTATCTGATAAAGTGATCATTGGTATGTTATCTTCTAATCTTTTTTATCTACATTTCTTAAAGATTTTCTATATTTATTTAACTAATATCCACTATTATTGGTGTCTACAAAATCATACATTGATATATATGTTTTATAAATTTTGTAGGTGAATGAAATGGTGTCTTAGCAGAGAAAAAAAAGAACCAACGATGATAGTAGCTCATATCTATATGATAATATAATCTTAAACATTTGGTGAATTTTGTTTGTATTTTGGGGGTTAACTTGTATTGTTGGTATATTCACTACATACTTTATCCACCTTTTTATCA

mRNA sequence

ATGCAACATGCATGGAAAGCGAACATCAACTTAAGAGAAAAACAAACAATCATGCAAGCTATTCAAAATGTGAGGAGAAAATACCTTCAATTGAAAAATAAAAGGGTTTCCTCAAAATTTCACCAAATTATTTTTTCCGCCTTTCACCTCTCAAACTTCAGAAACCCTCATTTCATTCCCCTCTGCTCTCAAACTTTAGAGACCCATTGCCATCTTTCTGTCGCTCTCTTCCCCATTGTCATCTCTCCGTCGCTCTCTTCTACTCACCATCTCTCTCTTTCGTCTTCTATCACGCCACGGCCGATAAGCTATTCACTCGCACATCGACGGGGAACCTCTTTTAACTTGCCGGACGTGACAGCATGCAATGCCACTACTCCGCACCTAACGGTAACAGTAGCTACATGGAATGTTGCAGCCAGAATTTCGGAGGAAGATCTTGAGATAAATGATTGGCTCTGCACAGAAGACAACGAAGATGTGAATGAAATGGTGTCTTAGCAGAGAAAAAAAAGAACCAACGATGATAGTAGCTCATATCTATATGATAATATAATCTTAAACATTTGGTGAATTTTGTTTGTATTTTGGGGGTTAACTTGTATTGTTGGTATATTCACTACATACTTTATCCACCTTTTTATCA

Coding sequence (CDS)

ATGCAACATGCATGGAAAGCGAACATCAACTTAAGAGAAAAACAAACAATCATGCAAGCTATTCAAAATGTGAGGAGAAAATACCTTCAATTGAAAAATAAAAGGGTTTCCTCAAAATTTCACCAAATTATTTTTTCCGCCTTTCACCTCTCAAACTTCAGAAACCCTCATTTCATTCCCCTCTGCTCTCAAACTTTAGAGACCCATTGCCATCTTTCTGTCGCTCTCTTCCCCATTGTCATCTCTCCGTCGCTCTCTTCTACTCACCATCTCTCTCTTTCGTCTTCTATCACGCCACGGCCGATAAGCTATTCACTCGCACATCGACGGGGAACCTCTTTTAACTTGCCGGACGTGACAGCATGCAATGCCACTACTCCGCACCTAACGGTAACAGTAGCTACATGGAATGTTGCAGCCAGAATTTCGGAGGAAGATCTTGAGATAAATGATTGGCTCTGCACAGAAGACAACGAAGATGTGAATGAAATGGTGTCTTAG

Protein sequence

MQHAWKANINLREKQTIMQAIQNVRRKYLQLKNKRVSSKFHQIIFSAFHLSNFRNPHFIPLCSQTLETHCHLSVALFPIVISPSLSSTHHLSLSSSITPRPISYSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWLCTEDNEDVNEMVS

Homology

[Close]

BLAST of MELO3C031407.2 vs. NCBI nr
Match: XP_008448728.1 (PREDICTED: type I inositol polyphosphate 5-phosphatase 2 isoform X1 [Cucumis melo] >XP_008448730.1 PREDICTED: type I inositol polyphosphate 5-phosphatase 2 isoform X1 [Cucumis melo] >XP_008448731.1 PREDICTED: type I inositol polyphosphate 5-phosphatase 2 isoform X1 [Cucumis melo])

HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07
Identity = 39/68 (57.35%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 94  SSSITPRPISYSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWL 153
           SS I+  P SY   HRRG S  L         T  L VTVATWNVA RI +EDLEINDWL
Sbjct: 72  SSRISDVPSSYQPRHRRGKSETL---RVQYINTKDLRVTVATWNVAGRIPDEDLEINDWL 131

Query: 154 CTEDNEDV 162
           CTED  D+
Sbjct: 132 CTEDPGDI 136

[Close]

BLAST of MELO3C031407.2 vs. NCBI nr
Match: XP_008448733.1 (PREDICTED: type I inositol polyphosphate 5-phosphatase 2 isoform X2 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 7.6e-07
Identity = 36/61 (59.02%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 101 PISYSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWLCTEDNED 160
           P SY   HRRG S  L         T  L VTVATWNVA RI +EDLEINDWLCTED  D
Sbjct: 15  PSSYQPRHRRGKSETL---RVQYINTKDLRVTVATWNVAGRIPDEDLEINDWLCTEDPGD 72

Query: 161 V 162
           +
Sbjct: 75  I 72

[Close]

BLAST of MELO3C031407.2 vs. NCBI nr
Match: XP_022155515.1 (type I inositol polyphosphate 5-phosphatase 2 isoform X3 [Momordica charantia])

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-06
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 94  SSSITPRPISYSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWL 153
           SS I+  P SY   HRRG S  L         T  L VT+ATWNVA R+ +EDLEI+DWL
Sbjct: 72  SSRISDVPRSYQSRHRRGKSETL---RVQYINTKDLRVTIATWNVAGRVPDEDLEIDDWL 131

Query: 154 CTEDNEDV 162
           CTE+  D+
Sbjct: 132 CTEEPGDI 136

[Close]

BLAST of MELO3C031407.2 vs. NCBI nr
Match: XP_022155514.1 (type I inositol polyphosphate 5-phosphatase 2 isoform X2 [Momordica charantia])

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-06
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 94  SSSITPRPISYSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWL 153
           SS I+  P SY   HRRG S  L         T  L VT+ATWNVA R+ +EDLEI+DWL
Sbjct: 72  SSRISDVPRSYQSRHRRGKSETL---RVQYINTKDLRVTIATWNVAGRVPDEDLEIDDWL 131

Query: 154 CTEDNEDV 162
           CTE+  D+
Sbjct: 132 CTEEPGDI 136

[Close]

BLAST of MELO3C031407.2 vs. NCBI nr
Match: XP_022155512.1 (type I inositol polyphosphate 5-phosphatase 2 isoform X1 [Momordica charantia] >XP_022155513.1 type I inositol polyphosphate 5-phosphatase 2 isoform X1 [Momordica charantia])

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-06
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 94  SSSITPRPISYSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWL 153
           SS I+  P SY   HRRG S  L         T  L VT+ATWNVA R+ +EDLEI+DWL
Sbjct: 72  SSRISDVPRSYQSRHRRGKSETL---RVQYINTKDLRVTIATWNVAGRVPDEDLEIDDWL 131

Query: 154 CTEDNEDV 162
           CTE+  D+
Sbjct: 132 CTEEPGDI 136

[Close]

BLAST of MELO3C031407.2 vs. TAIR10
Match: AT4G18010.1 (myo-inositol polyphosphate 5-phosphatase 2)

HSP 1 Score: 47.4 bits (111), Expect = 1.0e-05
Identity = 27/58 (46.55%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 104 YSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWLCTEDNEDV 162
           Y   HRRG S  L    A    T  + VTVATWNVA +   +DLEI DWL T++  D+
Sbjct: 89  YQRKHRRGKSETL---RAQYINTKDIKVTVATWNVAGKRPSDDLEIEDWLSTDNPSDI 143

[Close]

BLAST of MELO3C031407.2 vs. Swiss-Prot
Match: sp|Q9FUR2|IP5P2_ARATH (Type I inositol polyphosphate 5-phosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=IP5P2 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04
Identity = 27/58 (46.55%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 104 YSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWLCTEDNEDV 162
           Y   HRRG S  L    A    T  + VTVATWNVA +   +DLEI DWL T++  D+
Sbjct: 89  YQRKHRRGKSETL---RAQYINTKDIKVTVATWNVAGKRPSDDLEIEDWLSTDNPSDI 143

[Close]

BLAST of MELO3C031407.2 vs. TrEMBL
Match: tr|A0A1S3BL96|A0A1S3BL96_CUCME (type I inositol polyphosphate 5-phosphatase 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490810 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 39/68 (57.35%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 94  SSSITPRPISYSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWL 153
           SS I+  P SY   HRRG S  L         T  L VTVATWNVA RI +EDLEINDWL
Sbjct: 72  SSRISDVPSSYQPRHRRGKSETL---RVQYINTKDLRVTVATWNVAGRIPDEDLEINDWL 131

Query: 154 CTEDNEDV 162
           CTED  D+
Sbjct: 132 CTEDPGDI 136

[Close]

BLAST of MELO3C031407.2 vs. TrEMBL
Match: tr|A0A1S3BJS4|A0A1S3BJS4_CUCME (type I inositol polyphosphate 5-phosphatase 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490810 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 36/61 (59.02%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 101 PISYSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWLCTEDNED 160
           P SY   HRRG S  L         T  L VTVATWNVA RI +EDLEINDWLCTED  D
Sbjct: 15  PSSYQPRHRRGKSETL---RVQYINTKDLRVTVATWNVAGRIPDEDLEINDWLCTEDPGD 72

Query: 161 V 162
           +
Sbjct: 75  I 72

[Close]

BLAST of MELO3C031407.2 vs. TrEMBL
Match: tr|A0A0A0L1Z6|A0A0A0L1Z6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G015890 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.5e-06
Identity = 36/68 (52.94%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 94  SSSITPRPISYSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWL 153
           S+ I+  P S+   HRRG S  L         T  L VTVATWNVA RI  EDLEINDWL
Sbjct: 72  STRISDVPSSFQPRHRRGKSETL---RVQYINTKDLRVTVATWNVAGRIPNEDLEINDWL 131

Query: 154 CTEDNEDV 162
           CT+D  D+
Sbjct: 132 CTDDPGDI 136

[Close]

BLAST of MELO3C031407.2 vs. TrEMBL
Match: tr|A0A2P4J6B2|A0A2P4J6B2_QUESU (Isoform 2 of type i inositol polyphosphate 5-phosphatase 2 OS=Quercus suber OX=58331 GN=CFP56_25674 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.4e-04
Identity = 35/79 (44.30%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 89  HHLSLSSSITPRPIS------YSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARI 148
           H +  + SI P   S      Y L HRRG S  L    A    T  + VT+ TWNVA R+
Sbjct: 62  HRIQRNQSIFPCQTSDIPSKGYQLRHRRGKSETL---RAQYINTKDVRVTIGTWNVAGRL 121

Query: 149 SEEDLEINDWLCTEDNEDV 162
             EDLEI+DWLCTE+  D+
Sbjct: 122 PCEDLEIDDWLCTEEPADI 137

[Close]

BLAST of MELO3C031407.2 vs. TrEMBL
Match: tr|A0A1U8M3E6|A0A1U8M3E6_GOSHI (type I inositol polyphosphate 5-phosphatase 2-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107933576 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-04
Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 104 YSLAHRRGTSFNLPDVTACNATTPHLTVTVATWNVAARISEEDLEINDWLCTEDNEDV 162
           Y L HRRG S  L    A    T  + VT++TWNVA R+  +DLEI+DWLCT++  DV
Sbjct: 83  YRLGHRRGKSETL---RAQYINTKDVRVTISTWNVAGRLPSDDLEIDDWLCTKEPADV 137

The following BLAST results are available for this feature:

BLAST of MELO3C031407.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448728.1	1.5e-07	57.35	PREDICTED: type I inositol polyphosphate 5-phosphatase 2 isoform X1 [Cucumis mel...	[more]
XP_008448733.1	7.6e-07	59.02	PREDICTED: type I inositol polyphosphate 5-phosphatase 2 isoform X2 [Cucumis mel...	[more]
XP_022155515.1	2.9e-06	51.47	type I inositol polyphosphate 5-phosphatase 2 isoform X3 [Momordica charantia]	[more]
XP_022155514.1	2.9e-06	51.47	type I inositol polyphosphate 5-phosphatase 2 isoform X2 [Momordica charantia]	[more]
XP_022155512.1	2.9e-06	51.47	type I inositol polyphosphate 5-phosphatase 2 isoform X1 [Momordica charantia] >...	[more]

BLAST of MELO3C031407.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18010.1	1.0e-05	46.55	myo-inositol polyphosphate 5-phosphatase 2	[more]

BLAST of MELO3C031407.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FUR2\|IP5P2_ARATH	1.8e-04	46.55	Type I inositol polyphosphate 5-phosphatase 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of MELO3C031407.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BL96\|A0A1S3BL96_CUCME	1.0e-07	57.35	type I inositol polyphosphate 5-phosphatase 2 isoform X1 OS=Cucumis melo OX=3656...	[more]
tr\|A0A1S3BJS4\|A0A1S3BJS4_CUCME	5.0e-07	59.02	type I inositol polyphosphate 5-phosphatase 2 isoform X2 OS=Cucumis melo OX=3656...	[more]
tr\|A0A0A0L1Z6\|A0A0A0L1Z6_CUCSA	2.5e-06	52.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G015890 PE=4 SV=1	[more]
tr\|A0A2P4J6B2\|A0A2P4J6B2_QUESU	1.4e-04	44.30	Isoform 2 of type i inositol polyphosphate 5-phosphatase 2 OS=Quercus suber OX=5...	[more]
tr\|A0A1U8M3E6\|A0A1U8M3E6_GOSHI	1.8e-04	50.00	type I inositol polyphosphate 5-phosphatase 2-like isoform X1 OS=Gossypium hirsu...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046856	phosphatidylinositol dephosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031407.2.1	MELO3C031407.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C031407.2	Wax gourd	medwgoB458
MELO3C031407.2	Cucumber (Gy14) v2	cgybmedB122
MELO3C031407.2	Cucumber (Gy14) v1	cgymedB460
MELO3C031407.2	Cucurbita maxima (Rimu)	cmamedB193
MELO3C031407.2	Cucurbita maxima (Rimu)	cmamedB833
MELO3C031407.2	Cucurbita moschata (Rifu)	cmomedB184
MELO3C031407.2	Cucurbita moschata (Rifu)	cmomedB823
MELO3C031407.2	Cucurbita pepo (Zucchini)	cpemedB916
MELO3C031407.2	Wild cucumber (PI 183967)	cpimedB135
MELO3C031407.2	Cucumber (Chinese Long) v2	cumedB135
MELO3C031407.2	Bottle gourd (USVL1VR-Ls)	lsimedB125
MELO3C031407.2	Silver-seed gourd	carmedB0493
MELO3C031407.2	Cucumber (Chinese Long) v3	cucmedB137