MELO3C031386.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031386.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	zinc finger BED domain-containing protein RICESLEEPER 2-like
Location	chr05 : 12918299 .. 12921823 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTATCATTTTCACTGTTTTTCAATCTCTTTGCTTTGTTGTCTGTGAGTTTTTTCACTTCTTTATTCTTTATTTTTTGCAGCTTAAAAGTTGCCATCATTCACTCCATCAGCGTACTAGTCGTTTGTTTACAAGTTGTCGGTCACCCCATTAGCTTCCAACTTAATTCGTGGTTCATCTTCCAAAATCTCTATTGGGTTTCCTTCATTCAGGTAAATGGTTGTCTTTTTTCTTTTTCTTTTTTTCTTTTTTTTTTGTGAGAAATTAAGGTAGAGAATTTCTGTTATGGTGGAAAGGGGATAAAATCCCTATTGGGTTTCCTTCACTCTATTCCCCATTTGCGTCAGGCATGTTATGTATAAATTTTGTCTATACCAGAAGCATACATTTTGTGTATGCTTAGAAGCAGAATGAGAATCTTGATGCTTAATTTAATAGTTTTTGTTATGGTGAGAAAATTAAGGTAGGGTTTCTGTTATGGGTCTTATGGTCTATACCAAAAGCATACATTTTGCAGAAAATTTAAAAATGTTTGTAGTTTAGCGAATTGGTGGAACTCTTAAAAATAGAATGAGAATCATAAGGCTTAATTTCTTATTGCTTGATTGAATAAGTTTTGTGCATGTTCATACCTCATTCAAATAGGAGTTAATGAACTGCTATTACAGAAACATAACAGGGGTTGTGCAGACTAGAACTGCCTAATTTATCTCATCTTGGTGTAAGGGCTTGTCAAGTAAGTTTAACCTCTCTAAAAGAGTGCTTTTATCAAATGTTGTTGTACAATACTAATGAATATTCCTACTTTTCAAGTTGAAAGACCAAATAACTACATGAACTTGTTTAATTTTCTTTATCATAGTTATGCGCATACGAAATTGTGTATGTTTCGTTATGTGATGTTATTATTTAATTTTGTTTCCATAGGATGACTTCATTCTCTATAGACGAGACTTCAAAACAAAGTTGTTCTAGTCTATTGTAAGGAAAAAGAAAATCGGTTAAACCACCATCATCGGTATGGGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGCTGCGTATGTGGGACTTGATATGCTTGTGATTCCAAAAGAAATGGTACAACTAATATAAAAAGACATTTAGAGAAATATAAGAATTATGCAAATTCATTGGAAGATAATGTTGAAGGAGAGAGAGATTCTGAAAGTAGTTTGATGGTTACATCCTTCACGCAAGAAAATTGTAATACTATGCTTGCTAGTATGGTTATCTTTGATGAATTACCATTTAAGTTTGTAGAAAGTGAATGGTTTCATCAACTTTGTCGGTAATTAAATACAAAGTTTGTGATTCTATCAAGAGTAACCATTACAAAGGGTTGTTTTCAAATGTATATGAGGGAGAAAAAAAAGTTAAAATGTGCATTAACTCGAAGTGGCCAAAGAGTTTGTTTAACAACTGATACATGGACTTTTGTCGTACACAATATTAACTATACGGTACGACTCATTTCATTGATGATGATTGGAACTTATGCAAAAGAATTTTTAACTTTTGTCAAATAGCTAATCATGAAGGAGTACAATAGGTAGAGCCATTGAATAGTGCTTAGAAAGCGAGTATTGATAAGCTCTTTATTGTAACAGTAGATCATGTAAGTTCAATTAATGTTGTCATTGCATATTTGATTAAAAAGTTTAGAGGCAGAAATAGGTTGGTGTTGGATGGTGAATTTATTCACATTAGATGTTGTGCTCATATCCTTAATTTAATTGTTGTGATGCTTTAAAAAATTTGCATGTGTTTGTCATTCGAATAAAAAATGTTGTGAAGTATGTTAGGTCATCTCTTGGAAGACTACAAATATTTAAAGATTTTGCTAAAGAAGATAAGATATCAACAAAAAATTATCTAATGATGGATGCTCAAACACGATGGAAATCAACTTTCACTATGTTGGATGGAGAAATTAAGTGTCAAAAGACTTTCGAAAGATTAAAGGAGCATGACCCTAGTTATTTACCAAAGGATAATATTCCTACTGTTGAAGATTGGGATAATGCAAAAGTGTTTGTGAAGTTCCTAAGGACTGTTTCAAAAGTAACCATGAAGCTTTCTGCATTTGTGTAGGTGACTTCGAACATATTTTTCCATAATCTTTGTTTAATCCAAGAAATAATGCAACTTTCAATGCATTCACATACAATGAGTGTTCACGAATTATTGAGTCAAATGACATTAAGCATGTAGACAAAATTCAACAAGTATTGGGATATAACTACAAGTGAGGACCAATTTATTATTATATGTTTCTGTAGTTCTTGACCCTAGGTACAAGCTGGCTTATGTGAATTATTGTTTTAATGAATTTTTGGAGGAAGATTGTACAAAAAAAATGGACGAATAAGGTTGAAGAAGCATTTCATCGATTGTGTGATGATTATTATATGAGAATGTCAATGTCAAAAGAAAAATATTCACAAACACAATCATGTACACCTATCAACGAATTTGGCTTTCAAAGTCAAAGTGAAATACCTTCTATCTCATCTAGTGGATCTTAAGGCACGTGTTGCTGTTCATGATGGGTTTAAACAAAGTAACAAAACATGTCTAAATGATGCTAAAACAGAGGTGACTCGTTATCTAGATGAGGCTTATATAGAAGATGAATACTTAGATTTGCTAAATTGGTGGAAGGTGAATTCCTCTCAATTTAAGATCATTAGCCAAGTAGCTAGGGACATGTACAGTATTCCTATATCAAATGTGCTTTTTGAGTCGTTCTTAGCACTAAAAGGACGATTGTTAGATTCTTTTCAAAGTTCATTAACTCCTTAAACTGTAGAGGCACTCATTTGTGCTCAGAATTGGATTCAATATAAACCTTTGGGTAACATGACTGAAGAAACTGACGAGGATGAAGAAATTGATGAAGGTAATATTCTTTTTAAAGTATGCATTTAAAATTTTAATTTATCTCATTTAAGCTAACAGTTTGTCATTTTGATCTAGAATTCGTAAACATAGGAAATGAGACGGAAGCTGCATTGGAGAATCTGAATCATGACTCTAAGGTCTAAATCCCTACTCTCAAATCTTTATTTACATTTTTTTGTTTTAAATTGTTAACTTGTTAGATATTGAATCTTGTTTTTTTAAAGTCTTGAAGCACATGATGGAAGCACTTTGAGTTTGAACTTGAAGCATTTTGGATCATAAAAACTAGGCGTAACATAGACAAAGAGAATGTTATATATGATTTATATAAATTGAGAATACTTTTTTTGTGATTTACTATACAAGTTTAAGAATGATGTTCGTTCATGGTCAGGTTTGTGTTTAGAATTTAGAAATTTATGTTGTCACAAAAATGTTATGATGGAATTTATGCATATTTAGAATCATTTAGAATTTATGCATATTTATGATAGTTATGATTTAATTAGAATTTAAATGTAACGTCCCAAAAATTAAGATAATTTTGGAGTTAGTTATCTTAATTTTGTTTAATTAGATTTAA

mRNA sequence

ATGTTGGTATCATTTTCACTCTTAAAAGTTGCCATCATTCACTCCATCAGCGTACTAGTCGTTTGTTTACAAGTTGTCGGTCACCCCATTAGCTTCCAACTTAATTCGTGGTTCATCTTCCAAAATCTCTATTGGGTTTCCTTCATTCAGGTAGAGAATTTCTGTTATGGTGGAAAGGGGATAAAATCCCTATTGGGTTTCCTTCACTCTATTCCCCATTTGCGTCAGGCATGTTATGATGACTTCATTCTCTATAGACGAGACTTCAAAACAAAAAAATCGGTTAAACCACCATCATCGGTATGGGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGCTGCGTATGTGGGACTTGATATGCTTGTGATTCCAAAAGAAATGAATTATGCAAATTCATTGGAAGATAATGTTGAAGGAGAGAGAGATTCTGAAAGTAGTTTGATGGTTACATCCTTCACGCAAGAAAATTGTAATACTATGCTTGCTAGTATGGTTATCTTTGATGAATTACCATTTAAGTTTGTAGAAAGTGAATGGTTTCATCAACTTTGTCGGTCATCTCTTGGAAGACTACAAATATTTAAAGATTTTGCTAAAGAAGATAAGATATCAACAAAAAATTATCTAATGATGGATGCTCAAACACGATGGAAATCAACTTTCACTATGTTGGATGGAGAAATTAAGTGTCAAAAGACTTTCGAAAGATTAAAGGAGCATGACCCTAGTTATTTACCAAAGGATAATATTCCTACTGTTGAAGATTGGGATAATGCAAAAGTGTTTGTGAAGTTCCTAAGGACTGTTTCAAAAGCACGTGTTGCTGTTCATGATGGGTTTAAACAAAGTAACAAAACATGTCTAAATGATGCTAAAACAGAGGTGACTCGTTATCTAGATGAGGCTTATATAGAAGATGAATACTTAGATTTGCTAAATTGGTGGAAGGTGAATTCCTCTCAATTTAAGATCATTAGCCAAGTAGCTAGGGACATGTACAGTATTCCTATATCAAATGTGCTTTTTGAGTCGTTCTTAGCACTAAAAGGACGATTGTTAGATTCTTTTCAAAAGGCACTCATTTGTGCTCAGAATTGGATTCAATATAAACCTTTGGGTAACATGACTGAAGAAACTGACGAGGATGAAGAAATTGATGAAGTTTGTCATTTTGATCTAGAATTCGTAAACATAGGAAATGAGACGGAAGCTGCATTGGAGAATCTGAATCATGACTCTAAGATTTAA

Coding sequence (CDS)

ATGTTGGTATCATTTTCACTCTTAAAAGTTGCCATCATTCACTCCATCAGCGTACTAGTCGTTTGTTTACAAGTTGTCGGTCACCCCATTAGCTTCCAACTTAATTCGTGGTTCATCTTCCAAAATCTCTATTGGGTTTCCTTCATTCAGGTAGAGAATTTCTGTTATGGTGGAAAGGGGATAAAATCCCTATTGGGTTTCCTTCACTCTATTCCCCATTTGCGTCAGGCATGTTATGATGACTTCATTCTCTATAGACGAGACTTCAAAACAAAAAAATCGGTTAAACCACCATCATCGGTATGGGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGCTGCGTATGTGGGACTTGATATGCTTGTGATTCCAAAAGAAATGAATTATGCAAATTCATTGGAAGATAATGTTGAAGGAGAGAGAGATTCTGAAAGTAGTTTGATGGTTACATCCTTCACGCAAGAAAATTGTAATACTATGCTTGCTAGTATGGTTATCTTTGATGAATTACCATTTAAGTTTGTAGAAAGTGAATGGTTTCATCAACTTTGTCGGTCATCTCTTGGAAGACTACAAATATTTAAAGATTTTGCTAAAGAAGATAAGATATCAACAAAAAATTATCTAATGATGGATGCTCAAACACGATGGAAATCAACTTTCACTATGTTGGATGGAGAAATTAAGTGTCAAAAGACTTTCGAAAGATTAAAGGAGCATGACCCTAGTTATTTACCAAAGGATAATATTCCTACTGTTGAAGATTGGGATAATGCAAAAGTGTTTGTGAAGTTCCTAAGGACTGTTTCAAAAGCACGTGTTGCTGTTCATGATGGGTTTAAACAAAGTAACAAAACATGTCTAAATGATGCTAAAACAGAGGTGACTCGTTATCTAGATGAGGCTTATATAGAAGATGAATACTTAGATTTGCTAAATTGGTGGAAGGTGAATTCCTCTCAATTTAAGATCATTAGCCAAGTAGCTAGGGACATGTACAGTATTCCTATATCAAATGTGCTTTTTGAGTCGTTCTTAGCACTAAAAGGACGATTGTTAGATTCTTTTCAAAAGGCACTCATTTGTGCTCAGAATTGGATTCAATATAAACCTTTGGGTAACATGACTGAAGAAACTGACGAGGATGAAGAAATTGATGAAGTTTGTCATTTTGATCTAGAATTCGTAAACATAGGAAATGAGACGGAAGCTGCATTGGAGAATCTGAATCATGACTCTAAGATTTAA

Protein sequence

MLVSFSLLKVAIIHSISVLVVCLQVVGHPISFQLNSWFIFQNLYWVSFIQVENFCYGGKGIKSLLGFLHSIPHLRQACYDDFILYRRDFKTKKSVKPPSSVWEHFIKVEGCDPKYPRAAYVGLDMLVIPKEMNYANSLEDNVEGERDSESSLMVTSFTQENCNTMLASMVIFDELPFKFVESEWFHQLCRSSLGRLQIFKDFAKEDKISTKNYLMMDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDNAKVFVKFLRTVSKARVAVHDGFKQSNKTCLNDAKTEVTRYLDEAYIEDEYLDLLNWWKVNSSQFKIISQVARDMYSIPISNVLFESFLALKGRLLDSFQKALICAQNWIQYKPLGNMTEETDEDEEIDEVCHFDLEFVNIGNETEAALENLNHDSKI

Homology

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BLAST of MELO3C031386.2 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 2.8e-82
Identity = 234/650 (36.00%), Postives = 252/650 (38.77%), Query Frame = 0


Query: 92  KKSVKPPSSVWEHFIKVEGCDPKYPRAA--YVGLDMLV-------------IPKEMNYAN 151
           +K VKPPSSVWEHFIKVEGCDPKYPRAA  + G                  + K   Y N
Sbjct: 22  RKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEKCKMYVN 81

Query: 152 SLEDNVEGERDSESSLMVTSFTQENCNTMLASMVIFDELPFKFVESEWFHQLC------- 211
            LEDNVEGE DSES+LM  SFTQENC  MLA MVI DELPFKFVESE FHQ C       
Sbjct: 82  PLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRALNPKF 141

Query: 212 ------------------------------------------------------------ 271
                                                                       
Sbjct: 142 VIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDD 201

Query: 272 ------------------------------------------------------------ 331
                                                                       
Sbjct: 202 WNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFK 261

Query: 332 ----------------------------------------------RSSLGRLQIFKDFA 391
                                                         RSS  RLQIFKDFA
Sbjct: 262 GRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFA 321

Query: 392 KEDKISTKNYLMMDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDN 393
           KEDK+STKN L MD  TRW STFTMLDG IKCQKTFERL+EHDPSYLPKD+IPT EDWDN
Sbjct: 322 KEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDN 381

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BLAST of MELO3C031386.2 vs. NCBI nr
Match: XP_016899471.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo] >XP_016899472.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 153/361 (42.38%), Postives = 168/361 (46.54%), Query Frame = 0


Query: 216 MDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDNAKVFVKFLRTVS 275
           MD  TRW STFT+LDG IKCQKTFERLKEHDPSYLP D+IPTVEDWD+AKVFVKFL+T S
Sbjct: 1   MDVPTRWNSTFTILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFS 60

Query: 276 ------------------------------------------------------------ 335
                                                                       
Sbjct: 61  GVTMKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSE 120

Query: 336 ------------------------------------------------------------ 395
                                                                       
Sbjct: 121 KTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEK 180

Query: 396 ------------------------------KARVAVHDGFKQSNKTCLNDAKTEVTRYLD 419
                                         K RV VHD FKQSNKTCL+DAKTEVTRYLD
Sbjct: 181 YSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLD 240

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BLAST of MELO3C031386.2 vs. NCBI nr
Match: XP_016899473.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 153/361 (42.38%), Postives = 168/361 (46.54%), Query Frame = 0


Query: 216 MDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDNAKVFVKFLRTVS 275
           MD  TRW STFT+LDG IKCQKTFERLKEHDPSYLP D+IPTVEDWD+AKVFVKFL+T S
Sbjct: 1   MDVPTRWNSTFTILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFS 60

Query: 276 ------------------------------------------------------------ 335
                                                                       
Sbjct: 61  GVTMKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSE 120

Query: 336 ------------------------------------------------------------ 395
                                                                       
Sbjct: 121 KTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEK 180

Query: 396 ------------------------------KARVAVHDGFKQSNKTCLNDAKTEVTRYLD 419
                                         K RV VHD FKQSNKTCL+DAKTEVTRYLD
Sbjct: 181 YSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLD 240

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BLAST of MELO3C031386.2 vs. NCBI nr
Match: XP_016903394.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 129/247 (52.23%), Postives = 144/247 (58.30%), Query Frame = 0


Query: 216 MDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDNAKVFVKFLRTVS 275
           MD  TRW STFTMLDG IKC+  FERL+EHDPSYLPKD+IPT EDWDNAKV  KFL+T S
Sbjct: 1   MDVLTRWNSTFTMLDGAIKCKNFFERLEEHDPSYLPKDDIPTTEDWDNAKVVGKFLKTFS 60

Query: 276 ------------------------------------------------------------ 335
                                                                       
Sbjct: 61  EEDCAKIWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGS 120

Query: 336 -KARVAVHDGFKQSNKTCLNDAKTEVTRYLDEA---YIEDEYLDLLNWWKVNSSQFKIIS 391
            KA   VH  FKQSNKTCL+DAKTEV RYLDEA    I+DEYLDLL WWKVNSS+FKIIS
Sbjct: 121 YKAHAIVHHRFKQSNKTCLDDAKTEVARYLDEARIYSIDDEYLDLLTWWKVNSSRFKIIS 180

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BLAST of MELO3C031386.2 vs. NCBI nr
Match: ADN33674.1 (transposase [Cucumis melo subsp. melo])

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-52
Identity = 141/338 (41.72%), Postives = 154/338 (45.56%), Query Frame = 0


Query: 216 MDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDNAKVFVKFLRTVS 275
           MD  TRW STFTMLDG IKCQKTFERL+EHDPSYLPKD+IPT EDWDNAKVFVKFL+T S
Sbjct: 1   MDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFS 60

Query: 276 ------------------------------------------------------------ 335
                                                                       
Sbjct: 61  EVTMKFSASMSVTSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSE 120

Query: 336 ------------------------------------------------------------ 393
                                                                       
Sbjct: 121 KTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMSKEK 180

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BLAST of MELO3C031386.2 vs. TAIR10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 62.4 bits (150), Expect = 7.7e-10
Identity = 39/136 (28.68%), Postives = 72/136 (52.94%), Query Frame = 0


Query: 254 NIPTVEDWDNAKVFVKFLRTVSKARVAVH----DGFKQSN----KTCLNDAKTEVTRYLD 313
           NI TV+D  + ++F +++   S           DG    +    +T   + K+E+ +YLD
Sbjct: 540 NIKTVDDGIH-ELFTEYMALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSELDQYLD 599

Query: 314 EAYI-EDEYLDLLNWWKVNSSQFKIISQVARDMYSIPISNVLFESFLALKGRLLDSFQ-- 373
           E  +   +  D+L+WWK N  ++  +S++ARD+ SIP+S   F+    ++ R +D ++  
Sbjct: 600 ETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTS 659

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BLAST of MELO3C031386.2 vs. TAIR10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 52.4 bits (124), Expect = 8.0e-07
Identity = 26/88 (29.55%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 294 NDAKTEVTRYLDEAYIEDEYLDLLNWWKVNSSQFKIISQVARDMYSIPISNVLFESFLAL 353
           N+   E+T+YL E+ +  +  D+L+WWKVNS ++  +S +ARD  ++  ++   E     
Sbjct: 564 NNVVDELTQYLSESIVPMQ-TDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCG 623

Query: 354 KGRLLDSFQ--------KALICAQNWIQ 374
           KG  +D  +        +++IC ++WI+
Sbjct: 624 KGEEIDKQKYCMPHDSTQSVICIRSWIE 650

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BLAST of MELO3C031386.2 vs. Swiss-Prot
Match: sp|Q6AVI0|RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-09
Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = 0


Query: 297 KTEVTRYLDEAYI-EDEYLDLLNWWKVNSSQFKIISQVARDMYSIPISNVLFESFLALKG 356
           K+E+ +YLDE+     +  D+LNWWK+N+ +F  +S++ARD+ +IP+S V   + +   G
Sbjct: 615 KSELEQYLDESLTPRIQEFDILNWWKLNTLKFPTLSRMARDILAIPMSMVSSGNSIFSAG 674

Query: 357 ---RLLDSFQ--------KALICAQNWIQYKP 377
              R+LD ++        +AL+CA++W+QY P
Sbjct: 675 TGTRMLDDYRSSLRPEIVEALVCAKDWLQYLP 706

[Close]

BLAST of MELO3C031386.2 vs. Swiss-Prot
Match: sp|B9FJG3|RSLE1_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.8e-09
Identity = 33/92 (35.87%), Postives = 59/92 (64.13%), Query Frame = 0


Query: 297 KTEVTRYLDEAYI-EDEYLDLLNWWKVNSSQFKIISQVARDMYSIPISNVLFESFLALKG 356
           K+E+ +YLDE+     +  D+LNWWK+N+ ++  +S++ARD+ +IP+S V   + +   G
Sbjct: 615 KSELEQYLDESLTPRIQEFDILNWWKLNTLKYPTLSKMARDILAIPMSMVSSGNSIFSAG 674

Query: 357 ---RLLDSFQ--------KALICAQNWIQYKP 377
              R+LD ++        +AL+CA++W+QY P
Sbjct: 675 TGTRMLDDYRSSSRPEIVEALVCAKDWLQYLP 706

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BLAST of MELO3C031386.2 vs. Swiss-Prot
Match: sp|Q9M2N5|DSLE_ARATH (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-08
Identity = 39/136 (28.68%), Postives = 72/136 (52.94%), Query Frame = 0


Query: 254 NIPTVEDWDNAKVFVKFLRTVSKARVAVH----DGFKQSN----KTCLNDAKTEVTRYLD 313
           NI TV+D  + ++F +++   S           DG    +    +T   + K+E+ +YLD
Sbjct: 540 NIKTVDDGIH-ELFTEYMALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSELDQYLD 599

Query: 314 EAYI-EDEYLDLLNWWKVNSSQFKIISQVARDMYSIPISNVLFESFLALKGRLLDSFQ-- 373
           E  +   +  D+L+WWK N  ++  +S++ARD+ SIP+S   F+    ++ R +D ++  
Sbjct: 600 ETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTS 659

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BLAST of MELO3C031386.2 vs. Swiss-Prot
Match: sp|Q75HY5|RSLE3_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-07
Identity = 31/92 (33.70%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 298 TEVTRYLDEAYI-EDEYLDLLNWWKVNSSQFKIISQVARDMYSIPISNVLFESFL----A 357
           +E+ +YL+EA +   +  ++L WWK+N+ +F  +S++ARD+ +IP+S V   S +    A
Sbjct: 646 SELEQYLEEALMPRIQDFEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSATA 705

Query: 358 LKGRLLDSFQ--------KALICAQNWIQYKP 377
              ++LD ++        +AL CA++W+QY P
Sbjct: 706 TGSQMLDDYRSSLRPETVEALFCAKDWLQYPP 737

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BLAST of MELO3C031386.2 vs. Swiss-Prot
Match: sp|Q0JMB2|RSLE4_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-07
Identity = 40/139 (28.78%), Postives = 68/139 (48.92%), Query Frame = 0


Query: 250 LPKDNIPTVEDWDNAKVFVKFLRTVSKARVAVHDGFKQSNKTCLNDAKTEVTRYLDEAYI 309
           +P D +P +E    A          + A +   D +     T     K E+  YL+EA  
Sbjct: 547 VPADGLPFIET-GGAPATASPSTAAAGAGLVDFDMYLSEVTTMGQPFKHELELYLEEALT 606

Query: 310 E-DEYLDLLNWWKVNSSQFKIISQVARDMYSIPISNVLFESFLALK---GRLLDSFQ--- 369
           +     D+L WW+ N+ ++  +S++ARD+ +IP+S V   S + L     R LD ++   
Sbjct: 607 QRTPDFDVLKWWQDNTLKYPTLSRMARDVLAIPMSTVGVGSSVFLPDNGSRSLDDYRSSL 666

Query: 370 -----KALICAQNWIQYKP 377
                +AL+CA++W+QY P
Sbjct: 667 RPELVEALLCAKDWLQYSP 684

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BLAST of MELO3C031386.2 vs. TrEMBL
Match: tr|D0UIX2|D0UIX2_CUCME (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.8e-82
Identity = 234/650 (36.00%), Postives = 252/650 (38.77%), Query Frame = 0


Query: 92  KKSVKPPSSVWEHFIKVEGCDPKYPRAA--YVGLDMLV-------------IPKEMNYAN 151
           +K VKPPSSVWEHFIKVEGCDPKYPRAA  + G                  + K   Y N
Sbjct: 22  RKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEKCKMYVN 81

Query: 152 SLEDNVEGERDSESSLMVTSFTQENCNTMLASMVIFDELPFKFVESEWFHQLC------- 211
            LEDNVEGE DSES+LM  SFTQENC  MLA MVI DELPFKFVESE FHQ C       
Sbjct: 82  PLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRALNPKF 141

Query: 212 ------------------------------------------------------------ 271
                                                                       
Sbjct: 142 VIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDD 201

Query: 272 ------------------------------------------------------------ 331
                                                                       
Sbjct: 202 WNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFK 261

Query: 332 ----------------------------------------------RSSLGRLQIFKDFA 391
                                                         RSS  RLQIFKDFA
Sbjct: 262 GRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFA 321

Query: 392 KEDKISTKNYLMMDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDN 393
           KEDK+STKN L MD  TRW STFTMLDG IKCQKTFERL+EHDPSYLPKD+IPT EDWDN
Sbjct: 322 KEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDN 381

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BLAST of MELO3C031386.2 vs. TrEMBL
Match: tr|A0A1S4DU07|A0A1S4DU07_CUCME (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.1e-58
Identity = 153/361 (42.38%), Postives = 168/361 (46.54%), Query Frame = 0


Query: 216 MDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDNAKVFVKFLRTVS 275
           MD  TRW STFT+LDG IKCQKTFERLKEHDPSYLP D+IPTVEDWD+AKVFVKFL+T S
Sbjct: 1   MDVPTRWNSTFTILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFS 60

Query: 276 ------------------------------------------------------------ 335
                                                                       
Sbjct: 61  GVTMKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSE 120

Query: 336 ------------------------------------------------------------ 395
                                                                       
Sbjct: 121 KTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEK 180

Query: 396 ------------------------------KARVAVHDGFKQSNKTCLNDAKTEVTRYLD 419
                                         K RV VHD FKQSNKTCL+DAKTEVTRYLD
Sbjct: 181 YSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLD 240

[Close]

BLAST of MELO3C031386.2 vs. TrEMBL
Match: tr|A0A1S4DU44|A0A1S4DU44_CUCME (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.1e-58
Identity = 153/361 (42.38%), Postives = 168/361 (46.54%), Query Frame = 0


Query: 216 MDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDNAKVFVKFLRTVS 275
           MD  TRW STFT+LDG IKCQKTFERLKEHDPSYLP D+IPTVEDWD+AKVFVKFL+T S
Sbjct: 1   MDVPTRWNSTFTILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFS 60

Query: 276 ------------------------------------------------------------ 335
                                                                       
Sbjct: 61  GVTMKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSE 120

Query: 336 ------------------------------------------------------------ 395
                                                                       
Sbjct: 121 KTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEK 180

Query: 396 ------------------------------KARVAVHDGFKQSNKTCLNDAKTEVTRYLD 419
                                         K RV VHD FKQSNKTCL+DAKTEVTRYLD
Sbjct: 181 YSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLD 240

[Close]

BLAST of MELO3C031386.2 vs. TrEMBL
Match: tr|A0A1S4E592|A0A1S4E592_CUCME (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo OX=3656 GN=LOC107992164 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 7.3e-55
Identity = 129/247 (52.23%), Postives = 144/247 (58.30%), Query Frame = 0


Query: 216 MDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDNAKVFVKFLRTVS 275
           MD  TRW STFTMLDG IKC+  FERL+EHDPSYLPKD+IPT EDWDNAKV  KFL+T S
Sbjct: 1   MDVLTRWNSTFTMLDGAIKCKNFFERLEEHDPSYLPKDDIPTTEDWDNAKVVGKFLKTFS 60

Query: 276 ------------------------------------------------------------ 335
                                                                       
Sbjct: 61  EEDCAKIWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGS 120

Query: 336 -KARVAVHDGFKQSNKTCLNDAKTEVTRYLDEA---YIEDEYLDLLNWWKVNSSQFKIIS 391
            KA   VH  FKQSNKTCL+DAKTEV RYLDEA    I+DEYLDLL WWKVNSS+FKIIS
Sbjct: 121 YKAHAIVHHRFKQSNKTCLDDAKTEVARYLDEARIYSIDDEYLDLLTWWKVNSSRFKIIS 180

[Close]

BLAST of MELO3C031386.2 vs. TrEMBL
Match: tr|E5GB32|E5GB32_CUCME (Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 8.9e-53
Identity = 141/338 (41.72%), Postives = 154/338 (45.56%), Query Frame = 0


Query: 216 MDAQTRWKSTFTMLDGEIKCQKTFERLKEHDPSYLPKDNIPTVEDWDNAKVFVKFLRTVS 275
           MD  TRW STFTMLDG IKCQKTFERL+EHDPSYLPKD+IPT EDWDNAKVFVKFL+T S
Sbjct: 1   MDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFS 60

Query: 276 ------------------------------------------------------------ 335
                                                                       
Sbjct: 61  EVTMKFSASMSVTSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSE 120

Query: 336 ------------------------------------------------------------ 393
                                                                       
Sbjct: 121 KTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMSKEK 180

The following BLAST results are available for this feature:

BLAST of MELO3C031386.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ACX85638.1	2.8e-82	36.00	putative transposase [Cucumis melo]	[more]
XP_016899471.1	1.6e-58	42.38	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]
XP_016899473.1	1.6e-58	42.38	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]
XP_016903394.1	1.1e-54	52.23	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis...	[more]
ADN33674.1	1.4e-52	41.72	transposase [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C031386.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G42170.1	7.7e-10	28.68	BED zinc finger ;hAT family dimerisation domain	[more]
AT1G18560.1	8.0e-07	29.55	BED zinc finger ;hAT family dimerisation domain	[more]

BLAST of MELO3C031386.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6AVI0\|RSLE2_ORYSJ	1.3e-09	36.96	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
sp\|B9FJG3\|RSLE1_ORYSJ	2.8e-09	35.87	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
sp\|Q9M2N5\|DSLE_ARATH	1.4e-08	28.68	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]
sp\|Q75HY5\|RSLE3_ORYSJ	2.0e-07	33.70	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
sp\|Q0JMB2\|RSLE4_ORYSJ	2.0e-07	28.78	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]

BLAST of MELO3C031386.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|D0UIX2\|D0UIX2_CUCME	1.8e-82	36.00	Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1	[more]
tr\|A0A1S4DU07\|A0A1S4DU07_CUCME	1.1e-58	42.38	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucum...	[more]
tr\|A0A1S4DU44\|A0A1S4DU44_CUCME	1.1e-58	42.38	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucum...	[more]
tr\|A0A1S4E592\|A0A1S4E592_CUCME	7.3e-55	52.23	zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo OX=...	[more]
tr\|E5GB32\|E5GB32_CUCME	8.9e-53	41.72	Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR008906	HATC_C_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031386.2.1	MELO3C031386.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 299..362 e-value: 2.4E-11 score: 43.2
None	No IPR available	PANTHER	PTHR23272:SF54	SUBFAMILY NOT NAMED	coord: 139..196
None	No IPR available	PANTHER	PTHR23272:SF54	SUBFAMILY NOT NAMED	coord: 190..278
None	No IPR available	PANTHER	PTHR23272:SF54	SUBFAMILY NOT NAMED	coord: 285..373
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 285..373
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 139..196 coord: 190..278
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 154..374

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C031386.2	Cucumber (Chinese Long) v3	cucmedB137
MELO3C031386.2	Watermelon (97103) v2	medwmbB362
MELO3C031386.2	Wax gourd	medwgoB458
MELO3C031386.2	Cucumber (Gy14) v2	cgybmedB122
MELO3C031386.2	Cucumber (Gy14) v1	cgymedB340
MELO3C031386.2	Cucurbita maxima (Rimu)	cmamedB494
MELO3C031386.2	Cucurbita maxima (Rimu)	cmamedB830
MELO3C031386.2	Cucurbita moschata (Rifu)	cmomedB481
MELO3C031386.2	Cucurbita moschata (Rifu)	cmomedB823
MELO3C031386.2	Cucurbita pepo (Zucchini)	cpemedB125
MELO3C031386.2	Cucurbita pepo (Zucchini)	cpemedB627
MELO3C031386.2	Wild cucumber (PI 183967)	cpimedB135
MELO3C031386.2	Cucumber (Chinese Long) v2	cumedB135
MELO3C031386.2	Bottle gourd (USVL1VR-Ls)	lsimedB125
MELO3C031386.2	Silver-seed gourd	carmedB0711
MELO3C031386.2	Silver-seed gourd	carmedB1051