MELO3C031385.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031385.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPeptidyl-prolyl cis-trans isomerase
Locationchr05 : 12932466 .. 12934903 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCCTTTGGGCCCCACAAAATCTCCTTCTCCATCTTTCAATCAGCCATCCCTTGCGATGGTTACTTTCCCAAATGGTCCTATTTTGCGTGAAGGACTATTTGGATGGCTATTGTACGAGCTTTCTTTTGATCCTTATGGAGCGAGTGTAATGGGTGGCTTTCTTGGAACTCTTCTTTTCTGACACTGTTTGTCTATAGCTTTTTATTGGTGCAAATGTGGGCACCCTTTTAAGAACTATATTCTCTCCTTTTTAGTTTCTAATTGACGCAATCTTCTTACTCACCTTTAGGTGTTGGGGCTTCCCCCATTTCATTTATCAATGAAATGTGTTTCTTATCTAAAAAAGAGAAAAAAATAAACAATGGCTCTAAAACATAATGTCTCACTTCTTCCTTTTTCACTCCCTATATTTAGTATTTAAAGCAAATCCCTTGATACTCCCTTCTCTAATTGCTACTTTACCCTTAATACTTCAATAATACTTTTGATTCCACCCTAAAATCATTCCTATCATGATGTTCAAGTATTCATGCACGGGTGTAGTTTCTCTAGCCTTTCATCTTTACGTCGTTTGGTCAGTTTGGATGATGTAAACTTTGCTGCTACTCTGCTACGATAGACATTTTGCTGAATATTTTTCTCCAGTAATCTTTCTAGTTCAATGTCCTATCGATTGCTACTATGATCTTTCTAATCACAATTCTCCTTGTAAATTGATCATTAATCACGTTTTCTTTCAGCCAACTGAGCGCATAACCATACTATCATCATACTATTATGGTGAGAATATTAATCCTTCTTTTGTACTATTTTCCTGTTAGATTTCGCTCCTACTCCTAATCTTATTATGAGGTCCTTGATGTTGTTCATTGGTCTCATTTGCATTTAGATACCAATTTGGAGAGTTGTGAAGAGGATAGATCAACCTTGAAGCAAAGGCTTGCTGCGTCTTTTGTCGAGATTGAAAGACAGGTAAGAACAGCCAAGTTTTATACTACAATGAACCCTTAGACCTGGACTATTTTAAGCACGTTCTTCTATTTCTTTCATATTGCTCGATTAAAAGCTTGGTTCCTTGTATAGATAAAATGGTTATAGCTCGACTAATCTTTTGTTGTCTGCAGAGAATGAAATGCTTCCCCTGAAATGTGTGGGACAACAAAAACTCTGGTAGGGAAAACTAGAAGAGGAATTCAAATAGAAGCTGTTTGTTCAATATCTTTTTCAAATCTGTGTCCGTCCTTTTCGCTTGATACATTTCTTGCAAGGATATAGTGTATTCAGTGAACAAACTATTATACATGTTGTATAAACACTAATTTAATAATAACATTTAAAATCGAGTTATCTACTCCTTTTGTTGATGAGCTTGGAGGTTCAAATCTTGGCCCGTGTTGTATTAGTTAAATTTTAATGTCCACATTCATGTTTGTTGTAATGTCCTATTTGGTTGGTATCTAAGTTCGGAATACAATAAGTAAATAAAATTTGCATGTGGTAAGCCAAAATCTGAGAACAAATTTGGATAGGAAGATCTGATGGCGGCTTGGATTGATTCTTCAAAATTTACAATTTATCTGAAGCACCCAAAGTGAGGTGCCCTGAAGTCCATAGTTCTATCGGCAAAATTAGATTTAGAATATGTTCACTATGACTATTTGAATGATGCAAGATGCTCAATGTGAAGAATTAATTCATCCAATCATGAATTTCGTTTCTCAAACTCCGTGAGTGCTTTATGTTTAGTATTATGTTAAGGTTGTTTAGGTCTTACATTCTTTTAAAATTTGAGAATTGGGTTTACATCTTCAACTTTGAGAATCATCAATCCAATCCAATATATCAAAAAAAGCTATCAGGCATTTCAAAACAAATACTTAAAAAGTTAATATGATAACTCTTAAAACTATGTTGCGTATACGAAATGCAAAGGAATGTGAAGTTCAATGCTATGCATTCTATATTAGCATATAGAGAATGCAAACAATATATGCAATACAAAATATGCAAACAATATTCTATATTAGCATATAGAGAATGCAAACATTACATGCGATACAAAATTATTTAAAAATGAGTCATTGTTGTGTTTTATTATTAGATTACGTTTGGGAATAATTTTGAAACCGTTAAAAATCAATCAAAAACACACCTTTGATCACACAATCAAATCAAAACTACTAAACTCAATTTTTGTATTATAAAAAATGAGCTCAAATGACTAGAAGCATCTTTTGAGTGATTCTCAAATGTCAAAAATAATTTTAACAATTTAAGAATCACTCTGGAACAAAACAAATAAAAAGAGAAAATAATGATTCAAAGGTGAGGATCATTGAGTTGAGTATCGAGGTCAAGTACAAGAACATGGGGACCAAAGATGTTGGCAAAAACAATTGCTCTGTGCTGAGGGAGTTGATTGATCTTTGCTAA

mRNA sequence

ATGATCCCTTTGGGCCCCACAAAATCTCCTTCTCCATCTTTCAATCAGCCATCCCTTGCGATGGTTACTTTCCCAAATGGTCCTATTTTGCGTGAAGGACTATTTGGATGGCTATTGTACGAGCTTTCTTTTGATCCTTATGGAGCGAATACCAATTTGGAGAGTTGTGAAGAGGATAGATCAACCTTGAAGCAAAGGCTTGCTGCGTCTTTTGTCGAGATTGAAAGACAGAATCACTCTGGAACAAAACAAATAAAAAGAGAAAATAATGATTCAAAGGTGAGGATCATTGAGTTGAGTATCGAGGTCAAGTACAAGAACATGGGGACCAAAGATGTTGGCAAAAACAATTGCTCTGTGCTGAGGGAGTTGATTGATCTTTGCTAA

Coding sequence (CDS)

ATGATCCCTTTGGGCCCCACAAAATCTCCTTCTCCATCTTTCAATCAGCCATCCCTTGCGATGGTTACTTTCCCAAATGGTCCTATTTTGCGTGAAGGACTATTTGGATGGCTATTGTACGAGCTTTCTTTTGATCCTTATGGAGCGAATACCAATTTGGAGAGTTGTGAAGAGGATAGATCAACCTTGAAGCAAAGGCTTGCTGCGTCTTTTGTCGAGATTGAAAGACAGAATCACTCTGGAACAAAACAAATAAAAAGAGAAAATAATGATTCAAAGGTGAGGATCATTGAGTTGAGTATCGAGGTCAAGTACAAGAACATGGGGACCAAAGATGTTGGCAAAAACAATTGCTCTGTGCTGAGGGAGTTGATTGATCTTTGCTAA

Protein sequence

MIPLGPTKSPSPSFNQPSLAMVTFPNGPILREGLFGWLLYELSFDPYGANTNLESCEEDRSTLKQRLAASFVEIERQNHSGTKQIKRENNDSKVRIIELSIEVKYKNMGTKDVGKNNCSVLRELIDLC
Homology
[Close]
BLAST of MELO3C031385.2 vs. NCBI nr
Match: XP_008441716.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo])

HSP 1 Score: 60.1 bits (144), Expect = 6.4e-06
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      ++    Y  +TNLESCEEDRSTLKQRLAASFVEIERQ
Sbjct: 178 PTRREGIFVMPTERITILSSYYYDTNLESCEEDRSTLKQRLAASFVEIERQ 228

[Close]
BLAST of MELO3C031385.2 vs. NCBI nr
Match: XP_008441717.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 isoform X2 [Cucumis melo])

HSP 1 Score: 60.1 bits (144), Expect = 6.4e-06
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      ++    Y  +TNLESCEEDRSTLKQRLAASFVEIERQ
Sbjct: 170 PTRREGIFVMPTERITILSSYYYDTNLESCEEDRSTLKQRLAASFVEIERQ 220

[Close]
BLAST of MELO3C031385.2 vs. NCBI nr
Match: XP_004138913.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 4.2e-05
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      ++    Y  +TNL+SCEEDRSTLK+RLAASFVEIERQ
Sbjct: 170 PTRREGIFVMPTERITILSSYYYDTNLDSCEEDRSTLKRRLAASFVEIERQ 220

[Close]
BLAST of MELO3C031385.2 vs. NCBI nr
Match: KGN61368.1 (hypothetical protein Csa_2G100010 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 4.2e-05
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      ++    Y  +TNL+SCEEDRSTLK+RLAASFVEIERQ
Sbjct: 69  PTRREGIFVMPTERITILSSYYYDTNLDSCEEDRSTLKRRLAASFVEIERQ 119

[Close]
BLAST of MELO3C031385.2 vs. NCBI nr
Match: XP_022144529.1 (peptidyl-prolyl cis-trans isomerase CYP23 [Momordica charantia])

HSP 1 Score: 57.0 bits (136), Expect = 5.5e-05
Identity = 32/51 (62.75%), Postives = 36/51 (70.59%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      +S    Y  +TNLE CEE+RSTLKQRLAASFVEIERQ
Sbjct: 170 PTRREGIFVMPNERISILSSYYYDTNLERCEEERSTLKQRLAASFVEIERQ 220

[Close]
BLAST of MELO3C031385.2 vs. TAIR10
Match: AT1G26940.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06
Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      ++    Y  +T +ESCEE+RS LK+RL ASFVE+ERQ
Sbjct: 170 PTRREGIFVMPTERITILSTYYYDTKMESCEEERSVLKRRLQASFVEVERQ 220

[Close]
BLAST of MELO3C031385.2 vs. Swiss-Prot
Match: sp|Q8LDR3|CYP23_ARATH (Peptidyl-prolyl cis-trans isomerase CYP23 OS=Arabidopsis thaliana OX=3702 GN=CYP23 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      ++    Y  +T +ESCEE+RS LK+RL ASFVE+ERQ
Sbjct: 170 PTRREGIFVMPTERITILSTYYYDTKMESCEEERSVLKRRLQASFVEVERQ 220

[Close]
BLAST of MELO3C031385.2 vs. TrEMBL
Match: tr|A0A1S3B3L0|A0A1S3B3L0_CUCME (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103485795 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.3e-06
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      ++    Y  +TNLESCEEDRSTLKQRLAASFVEIERQ
Sbjct: 170 PTRREGIFVMPTERITILSSYYYDTNLESCEEDRSTLKQRLAASFVEIERQ 220

[Close]
BLAST of MELO3C031385.2 vs. TrEMBL
Match: tr|A0A1S3B4U1|A0A1S3B4U1_CUCME (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103485795 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.3e-06
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      ++    Y  +TNLESCEEDRSTLKQRLAASFVEIERQ
Sbjct: 178 PTRREGIFVMPTERITILSSYYYDTNLESCEEDRSTLKQRLAASFVEIERQ 228

[Close]
BLAST of MELO3C031385.2 vs. TrEMBL
Match: tr|A0A0A0LHV0|A0A0A0LHV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100010 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-05
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 28  PILREGLFGWLLYELS-FDPYGANTNLESCEEDRSTLKQRLAASFVEIERQ 78
           P  REG+F      ++    Y  +TNL+SCEEDRSTLK+RLAASFVEIERQ
Sbjct: 69  PTRREGIFVMPTERITILSSYYYDTNLDSCEEDRSTLKRRLAASFVEIERQ 119

The following BLAST results are available for this feature:
BLAST of MELO3C031385.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008441716.16.4e-0664.71PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo][more]
XP_008441717.16.4e-0664.71PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 isoform X2 [Cucumis melo][more]
XP_004138913.14.2e-0560.78PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 [Cucumis sativus][more]
KGN61368.14.2e-0560.78hypothetical protein Csa_2G100010 [Cucumis sativus][more]
XP_022144529.15.5e-0562.75peptidyl-prolyl cis-trans isomerase CYP23 [Momordica charantia][more]
BLAST of MELO3C031385.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26940.11.6e-0650.98Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein[more]
BLAST of MELO3C031385.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8LDR3|CYP23_ARATH2.8e-0550.98Peptidyl-prolyl cis-trans isomerase CYP23 OS=Arabidopsis thaliana OX=3702 GN=CYP... [more]
BLAST of MELO3C031385.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B3L0|A0A1S3B3L0_CUCME4.3e-0664.71Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103485795 PE=3... [more]
tr|A0A1S3B4U1|A0A1S3B4U1_CUCME4.3e-0664.71Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103485795 PE=3... [more]
tr|A0A0A0LHV0|A0A0A0LHV0_CUCSA2.8e-0560.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100010 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
cellular_component GO:0005575 cellular_component
molecular_function GO:0016853 isomerase activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031385.2.1MELO3C031385.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031385.2Wax gourdmedwgoB458
MELO3C031385.2Cucumber (Gy14) v2cgybmedB122
MELO3C031385.2Cucumber (Gy14) v1cgymedB340
MELO3C031385.2Cucurbita maxima (Rimu)cmamedB494
MELO3C031385.2Cucurbita maxima (Rimu)cmamedB830
MELO3C031385.2Cucurbita moschata (Rifu)cmomedB481
MELO3C031385.2Cucurbita moschata (Rifu)cmomedB823
MELO3C031385.2Cucurbita pepo (Zucchini)cpemedB125
MELO3C031385.2Cucurbita pepo (Zucchini)cpemedB627
MELO3C031385.2Wild cucumber (PI 183967)cpimedB135
MELO3C031385.2Cucumber (Chinese Long) v2cumedB135
MELO3C031385.2Bottle gourd (USVL1VR-Ls)lsimedB125
MELO3C031385.2Silver-seed gourdcarmedB0711
MELO3C031385.2Silver-seed gourdcarmedB1051
MELO3C031385.2Cucumber (Chinese Long) v3cucmedB137
MELO3C031385.2Watermelon (97103) v2medwmbB362