MELO3C031366.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C031366.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTransmembrane protein, putative
Locationchr05 : 11845509 .. 11846024 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAACAAACACTTCTTGGAGTCCTAACTGCATTCACGTTGGCCCAACGTCAGATGTTACTAACATTGGAGCTACTAATGAACAACAATAAGCGTCTCCCACATACACCGTCCGATACACGCCATAGAATTAGGCAGCTTGCATACTTTCACATGATACACGAGTCAGATCTTGTGTGTCGACAGAGCACGCATATGGACATGCGAACATTCGTAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCGTCGACAGAGATTGTCAATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCTCATGACGTAACGAACCGCGCCATTCAACGGGAATTTGTACGATCCGGTGAGACAGTATCTTTACATTTTAACCTCGTATTGTTGGCTGTGGTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCTGGTAACAAACAACTGCAATTATCAAAGTTGGAAGTGTTTCGAGGTGGGCATGGTAGAAGTTCAATGTATTTGA

mRNA sequence

ATGGATCAACAAACACTTCTTGGAGTCCTAACTGCATTCACGTTGGCCCAACGTCAGATGTTACTAACATTGGAGCTACTAATGAACAACAATAAGCGTCTCCCACATACACCGTCCGATACACGCCATAGAATTAGGCAGCTTGCATACTTTCACATGATACACGAGTCAGATCTTGTGTGTCGACAGAGCACGCATATGGACATGCGAACATTCGTAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCGTCGACAGAGATTGTCAATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCTCATGACGTAACGAACCGCGCCATTCAACGGGAATTTGTACGATCCGGTGAGACAGTATCTTTACATTTTAACCTCGTATTGTTGGCTGTGGTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCTGGTAACAAACAACTGCAATTATCAAAGTTGGAAGTGTTTCGAGGTGGGCATGGTAGAAGTTCAATGTATTTGA

Coding sequence (CDS)

ATGGATCAACAAACACTTCTTGGAGTCCTAACTGCATTCACGTTGGCCCAACGTCAGATGTTACTAACATTGGAGCTACTAATGAACAACAATAAGCGTCTCCCACATACACCGTCCGATACACGCCATAGAATTAGGCAGCTTGCATACTTTCACATGATACACGAGTCAGATCTTGTGTGTCGACAGAGCACGCATATGGACATGCGAACATTCGTAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCGTCGACAGAGATTGTCAATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTTGCTCATGACGTAACGAACCGCGCCATTCAACGGGAATTTGTACGATCCGGTGAGACAGTATCTTTACATTTTAACCTCGTATTGTTGGCTGTGGTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCTGGTAACAAACAACTGCAATTATCAAAGTTGGAAGTGTTTCGAGGTGGGCATGGTAGAAGTTCAATGTATTTGA

Protein sequence

MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLVCRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLVTNNCNYQSWKCFEVGMVEVQCI
BLAST of MELO3C031366.2 vs. NCBI nr
Match: XP_016899496.1 (PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 7.4e-66
Identity = 133/162 (82.10%), Postives = 144/162 (88.89%), Query Frame = 0

Query: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60
           MDQQTLLGVLTAFTLAQRQ+LLTLELLMN+N+R+ +TP DT +RIRQLAYF MIHESDLV
Sbjct: 1   MDQQTLLGVLTAFTLAQRQILLTLELLMNDNRRITYTPFDTCNRIRQLAYFRMIHESDLV 60

Query: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120
           CRQST MD RTF ILCHLLR V+ LSS EI++VEEMVAMFLHVLAHDV N  IQR+FVRS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRTVSVLSSIEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRS 120

Query: 121 GETVSLHFNLVLLAVVRLYEELIKRPVLVTNNCNYQSWKCFE 163
           GETVS HFNLVLL VVRLYE+LIKRPV VTNNCN Q WKCFE
Sbjct: 121 GETVSRHFNLVLLVVVRLYEKLIKRPVSVTNNCNDQRWKCFE 162

BLAST of MELO3C031366.2 vs. NCBI nr
Match: XP_008463581.1 (PREDICTED: uncharacterized protein LOC103501690 [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 4.2e-53
Identity = 110/157 (70.06%), Postives = 130/157 (82.80%), Query Frame = 0

Query: 15  LAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLVCRQSTHMDMRTFVI 74
           + Q QMLL LE LMN+NKRLP TP +TRHRIRQLAYF MIH+S LVCR+ T +D RT +I
Sbjct: 1   MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLII 60

Query: 75  LCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRSGETVSLHFNLVLLA 134
           LC+LL+ VAGLS  EIV+VEEMVAMFL+VL H+V NR IQ++FVRSGET S HFNLV+ A
Sbjct: 61  LCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQKFVRSGETDSGHFNLVVFA 120

Query: 135 VVRLYEELIKRPVLVTNNCNYQSWKCFEVGMVEVQCI 172
           VVRLY+E+IK+PVLVTNNC  Q WK FEVG+V V C+
Sbjct: 121 VVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCL 157

BLAST of MELO3C031366.2 vs. NCBI nr
Match: XP_008454692.1 (PREDICTED: uncharacterized protein LOC103495048 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 3.0e-51
Identity = 104/162 (64.20%), Postives = 127/162 (78.40%), Query Frame = 0

Query: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60
           M +  L  ++  F  +QRQ+LLTLELL N+ KR+ H P + RHRIRQLAYF MIH SDLV
Sbjct: 1   MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120
           CRQST MD R F ILCHLLR +A L+STE+V+VEEMVAM+LH+LAHDV NR IQREF+RS
Sbjct: 61  CRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSLHFNLVLLAVVRLYEELIKRPVLVTNNCNYQSWKCFE 163
           GE +S HFN+VLLAV+RL+ EL+K+P  V N+C  Q W+ FE
Sbjct: 121 GEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRWFE 162

BLAST of MELO3C031366.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 193.4 bits (490), Expect = 6.5e-46
Identity = 96/110 (87.27%), Postives = 101/110 (91.82%), Query Frame = 0

Query: 53  MIHESDLVCRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRA 112
           MIHESDLVCRQST MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NR 
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 113 IQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLVTNNCNYQSWKCFE 163
           IQ+EFVRSGETVS HFN+VLLAV+RLYEELIKRPV VT+NCN Q WKCFE
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE 110

BLAST of MELO3C031366.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 168.7 bits (426), Expect = 1.7e-38
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 0

Query: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60
           MD+  L  ++ AF  +QRQ+LL LELL N+ KR+ H P +TRHRIRQLAYF MIH +   
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGT--- 60

Query: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120
                                +AGL+STE+V+VEEMVAMFLH+LAHDV +R I+REF+RS
Sbjct: 61  ---------------------IAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 120

Query: 121 GETVSLHFNLVLLAVVRLYEELIKRPVLVTNNCNYQSWKCFE 163
           GET+S HFN+VLLAV+RL+EEL+K+P  V N C  Q W+ FE
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE 138

BLAST of MELO3C031366.2 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 61.6 bits (148), Expect = 5.4e-10
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 0

Query: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120
           C ++  MD   F  LC LL+    L  T  + +E  +A+FL ++ H++  RA+Q  F  S
Sbjct: 42  CFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYS 101

Query: 121 GETVSLHFNLVLLAVVRLYEELIK 145
           GET+S HFN VL AV+ + ++  +
Sbjct: 102 GETISRHFNNVLNAVIAISKDFFQ 125

BLAST of MELO3C031366.2 vs. TAIR10
Match: AT5G28730.1 (unknown protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.5e-07
Identity = 31/93 (33.33%), Postives = 50/93 (53.76%), Query Frame = 0

Query: 52  HMIHESDLVCRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNR 111
           H I+ +++ C+    M    F  LC +L    GL S+  ++++E VA+FL + A + T R
Sbjct: 15  HQIYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQR 74

Query: 112 AIQREFVRSGETVSLHFNLVLLAVVRLYEELIK 145
            I   F  + ET+   F+ VL A+ RL  E I+
Sbjct: 75  DIALRFGHAQETIWRKFHDVLKAMERLAVEYIR 107

BLAST of MELO3C031366.2 vs. TrEMBL
Match: tr|A0A1S4DU32|A0A1S4DU32_CUCME (uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.9e-66
Identity = 133/162 (82.10%), Postives = 144/162 (88.89%), Query Frame = 0

Query: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60
           MDQQTLLGVLTAFTLAQRQ+LLTLELLMN+N+R+ +TP DT +RIRQLAYF MIHESDLV
Sbjct: 1   MDQQTLLGVLTAFTLAQRQILLTLELLMNDNRRITYTPFDTCNRIRQLAYFRMIHESDLV 60

Query: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120
           CRQST MD RTF ILCHLLR V+ LSS EI++VEEMVAMFLHVLAHDV N  IQR+FVRS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRTVSVLSSIEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRS 120

Query: 121 GETVSLHFNLVLLAVVRLYEELIKRPVLVTNNCNYQSWKCFE 163
           GETVS HFNLVLL VVRLYE+LIKRPV VTNNCN Q WKCFE
Sbjct: 121 GETVSRHFNLVLLVVVRLYEKLIKRPVSVTNNCNDQRWKCFE 162

BLAST of MELO3C031366.2 vs. TrEMBL
Match: tr|A0A1S3CL59|A0A1S3CL59_CUCME (uncharacterized protein LOC103501690 OS=Cucumis melo OX=3656 GN=LOC103501690 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.8e-53
Identity = 110/157 (70.06%), Postives = 130/157 (82.80%), Query Frame = 0

Query: 15  LAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLVCRQSTHMDMRTFVI 74
           + Q QMLL LE LMN+NKRLP TP +TRHRIRQLAYF MIH+S LVCR+ T +D RT +I
Sbjct: 1   MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLII 60

Query: 75  LCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRSGETVSLHFNLVLLA 134
           LC+LL+ VAGLS  EIV+VEEMVAMFL+VL H+V NR IQ++FVRSGET S HFNLV+ A
Sbjct: 61  LCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQKFVRSGETDSGHFNLVVFA 120

Query: 135 VVRLYEELIKRPVLVTNNCNYQSWKCFEVGMVEVQCI 172
           VVRLY+E+IK+PVLVTNNC  Q WK FEVG+V V C+
Sbjct: 121 VVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCL 157

BLAST of MELO3C031366.2 vs. TrEMBL
Match: tr|A0A1S3BYR8|A0A1S3BYR8_CUCME (uncharacterized protein LOC103495048 OS=Cucumis melo OX=3656 GN=LOC103495048 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.0e-51
Identity = 104/162 (64.20%), Postives = 127/162 (78.40%), Query Frame = 0

Query: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60
           M +  L  ++  F  +QRQ+LLTLELL N+ KR+ H P + RHRIRQLAYF MIH SDLV
Sbjct: 1   MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120
           CRQST MD R F ILCHLLR +A L+STE+V+VEEMVAM+LH+LAHDV NR IQREF+RS
Sbjct: 61  CRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSLHFNLVLLAVVRLYEELIKRPVLVTNNCNYQSWKCFE 163
           GE +S HFN+VLLAV+RL+ EL+K+P  V N+C  Q W+ FE
Sbjct: 121 GEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRWFE 162

BLAST of MELO3C031366.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.3e-46
Identity = 96/110 (87.27%), Postives = 101/110 (91.82%), Query Frame = 0

Query: 53  MIHESDLVCRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRA 112
           MIHESDLVCRQST MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NR 
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 113 IQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLVTNNCNYQSWKCFE 163
           IQ+EFVRSGETVS HFN+VLLAV+RLYEELIKRPV VT+NCN Q WKCFE
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE 110

BLAST of MELO3C031366.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 0

Query: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60
           MD+  L  ++ AF  +QRQ+LL LELL N+ KR+ H P +TRHRIRQLAYF MIH +   
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGT--- 60

Query: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120
                                +AGL+STE+V+VEEMVAMFLH+LAHDV +R I+REF+RS
Sbjct: 61  ---------------------IAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 120

Query: 121 GETVSLHFNLVLLAVVRLYEELIKRPVLVTNNCNYQSWKCFE 163
           GET+S HFN+VLLAV+RL+EEL+K+P  V N C  Q W+ FE
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016899496.17.4e-6682.10PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo][more]
XP_008463581.14.2e-5370.06PREDICTED: uncharacterized protein LOC103501690 [Cucumis melo][more]
XP_008454692.13.0e-5164.20PREDICTED: uncharacterized protein LOC103495048 [Cucumis melo][more]
ADN33754.16.5e-4687.27retrotransposon protein [Cucumis melo subsp. melo][more]
ADN34114.11.7e-3854.32retrotransposon protein [Cucumis melo subsp. melo][more]
Match NameE-valueIdentityDescription
AT5G41980.15.4e-1036.90Putative harbinger transposase-derived nuclease (InterPro:IPR006912)[more]
AT5G28730.12.5e-0733.33unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4DU32|A0A1S4DU32_CUCME4.9e-6682.10uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=... [more]
tr|A0A1S3CL59|A0A1S3CL59_CUCME2.8e-5370.06uncharacterized protein LOC103501690 OS=Cucumis melo OX=3656 GN=LOC103501690 PE=... [more]
tr|A0A1S3BYR8|A0A1S3BYR8_CUCME2.0e-5164.20uncharacterized protein LOC103495048 OS=Cucumis melo OX=3656 GN=LOC103495048 PE=... [more]
tr|E5GBB2|E5GBB2_CUCME4.3e-4687.27Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|E5GCB5|E5GCB5_CUCME1.1e-3854.32Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031366.2.1MELO3C031366.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22930:SF112SUBFAMILY NOT NAMEDcoord: 22..162
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 22..162

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031366.2Cucumber (Gy14) v2cgybmedB122
MELO3C031366.2Cucumber (Gy14) v1cgymedB443
MELO3C031366.2Cucurbita maxima (Rimu)cmamedB830
MELO3C031366.2Cucurbita moschata (Rifu)cmomedB823
MELO3C031366.2Cucurbita pepo (Zucchini)cpemedB125
MELO3C031366.2Wild cucumber (PI 183967)cpimedB135
MELO3C031366.2Cucumber (Chinese Long) v2cumedB135
MELO3C031366.2Cucumber (Chinese Long) v3cucmedB137
MELO3C031366.2Wax gourdmedwgoB458