MELO3C031298.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031298.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionaccelerated cell death 11
Locationchr05 : 8001225 .. 8002139 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTATACATAAAATATTTTGATATTTTTGAAAATACACCTCTATTTTATTCTATTTTAAATAAAACTACAATCGCACAAATCTCTACCGCCTCCTCTAAAACCCCTATTTCTCCAGCTTTGCCGTCTCAGCTGCTGCACTCTCAATCACCGTCTCCATTTCTCTTTCGGTTCCTCTCAGTCGTCGTCTCCATCTCTGCACTCATATCGCCGCTCCTTCCAAATTCGCCGCACCGGATTTCTTCGACCTCCCGAACTCGGCCGACGTCAAGGCGTTGGAGCTTCGCATTGGCTCGGGTGAAACCCCCCACTACTAGAAAATGGCTGGAAATACGAATCGAAGAACATAATGGCTGGAAATTTGCGAAGCAATCCTCGTGTATTTCGTTGAGGAGGTCATCACTGGATTCGATGAGAGCGATCTATATAGCTCCTGGGTTAAGGTGATCGATTATTTCACTTGTTTTTACTCTGATTTACCAAACTATGGTGTTCTTTTTTCTAATCTTGTGTTGGTTGTCCTGTTTGTTCGTTTAAGGCGGCAGCCACCAGAATATATCGGAGTCCTTCAAAGCCCTTGCAGCCACTGTAAATGCTGAAAATACCACGGTCGAGGTTGCGCTGTTTTCTCGAGCCTGCTCCTTCATTTCGCCTCTTTTTGATTGCTTGGGCATAGCATTCAAATTTGCAGAAATGGACTGTTGCAATGGTCTTTGTATTAGTTTCTATCTTAATTTTTGATGTTGTAGCTGCCGTTTGGTCTTGAGGAACTATGGAAGATGAATTGGTGTAAAGTTTGGTTCTAGAATTTTTAGGCCTGTCTGTGATTGCCAAAAATTTGTAGGTTGTGGAAACCCAAGACTTACGTGGAAACGCAAGAACCGGAAGAACTACGGTAAAAAAGGAGAATAA

mRNA sequence

ATGGTTCTATACATAAAATATTTTGATATTTTTGAAAATACACCTCTATTTTATTCTATTTTAAATAAAACTACAATCGCACAAATCTCTACCGCCTCCTCTAAAACCCCTATTTCTCCAGCTTTGCCGTCTCAGCTGCTGCACTCTCAATCACCGTCTCCATTTCTCTTTCGGTTCCTCTCAGTCGTCGTCTCCATCTCTGCACTCATATCGCCGCTCCTTCCAAATTCGCCGCACCGGATTTCTTCGACCTCCCGAACTCGGCCGACGTCAAGGCGTTGGAGCTTCGCATTGGCTCGGGTGAAACCCCCCACTACTAGAAAATGGCTGGAAATACGAATCGAAGAACATAATGGCTGGAAATTTGCGAAGCAATCCTCGTGTATTTCGTTGAGGAGGTCATCACTGGATTCGATGAGAGCGATCTATATAGCTCCTGGGTTAAGCCACCAGAATATATCGGAGTCCTTCAAAGCCCTTGCAGCCACTGTAAATGCTGAAAATACCACGGTCGAGGTTGCGCTGTTTTCTCGAGCCTGCTCCTTCATTTCGCCTCTTTTTGATTGCTTGGGCATAGCATTCAAATTTGCAGAAATGGACTGTTGCAATGGTTGTGGAAACCCAAGACTTACGTGGAAACGCAAGAACCGGAAGAACTACGGTAAAAAAGGAGAATAA

Coding sequence (CDS)

ATGGTTCTATACATAAAATATTTTGATATTTTTGAAAATACACCTCTATTTTATTCTATTTTAAATAAAACTACAATCGCACAAATCTCTACCGCCTCCTCTAAAACCCCTATTTCTCCAGCTTTGCCGTCTCAGCTGCTGCACTCTCAATCACCGTCTCCATTTCTCTTTCGGTTCCTCTCAGTCGTCGTCTCCATCTCTGCACTCATATCGCCGCTCCTTCCAAATTCGCCGCACCGGATTTCTTCGACCTCCCGAACTCGGCCGACGTCAAGGCGTTGGAGCTTCGCATTGGCTCGGGTGAAACCCCCCACTACTAGAAAATGGCTGGAAATACGAATCGAAGAACATAATGGCTGGAAATTTGCGAAGCAATCCTCGTGTATTTCGTTGAGGAGGTCATCACTGGATTCGATGAGAGCGATCTATATAGCTCCTGGGTTAAGCCACCAGAATATATCGGAGTCCTTCAAAGCCCTTGCAGCCACTGTAAATGCTGAAAATACCACGGTCGAGGTTGCGCTGTTTTCTCGAGCCTGCTCCTTCATTTCGCCTCTTTTTGATTGCTTGGGCATAGCATTCAAATTTGCAGAAATGGACTGTTGCAATGGTTGTGGAAACCCAAGACTTACGTGGAAACGCAAGAACCGGAAGAACTACGGTAAAAAAGGAGAATAA

Protein sequence

MVLYIKYFDIFENTPLFYSILNKTTIAQISTASSKTPISPALPSQLLHSQSPSPFLFRFLSVVVSISALISPLLPNSPHRISSTSRTRPTSRRWSFALARVKPPTTRKWLEIRIEEHNGWKFAKQSSCISLRRSSLDSMRAIYIAPGLSHQNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMDCCNGCGNPRLTWKRKNRKNYGKKGE
Homology
[Close]
BLAST of MELO3C031298.2 vs. NCBI nr
Match: XP_008458024.1 (PREDICTED: accelerated cell death 11 [Cucumis melo] >XP_008458025.1 PREDICTED: accelerated cell death 11 [Cucumis melo])

HSP 1 Score: 92.4 bits (228), Expect = 2.1e-15
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 151 QNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           +NISESFKALAATVNAENTTVEVA FSRACSFISPLF CLGIAFKFAEMD
Sbjct: 10  RNISESFKALAATVNAENTTVEVAPFSRACSFISPLFGCLGIAFKFAEMD 59

[Close]
BLAST of MELO3C031298.2 vs. NCBI nr
Match: XP_022974080.1 (accelerated cell death 11 [Cucurbita maxima])

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-14
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 151 QNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           +NISESFKALAATVNAE T VEVA FSRACSFISPLF CLGIAFKFAEMD
Sbjct: 12  RNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEMD 61

[Close]
BLAST of MELO3C031298.2 vs. NCBI nr
Match: XP_023536602.1 (accelerated cell death 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-14
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 151 QNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           +NISESFKALAATVNAE T VEVA FSRACSFISPLF CLGIAFKFAEMD
Sbjct: 12  RNISESFKALAATVNAETTAVEVAPFSRACSFISPLFGCLGIAFKFAEMD 61

[Close]
BLAST of MELO3C031298.2 vs. NCBI nr
Match: XP_004139630.1 (PREDICTED: ceramide-1-phosphate transfer protein [Cucumis sativus] >XP_011659189.1 PREDICTED: ceramide-1-phosphate transfer protein [Cucumis sativus] >KGN44602.1 hypothetical protein Csa_7G341220 [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 5.1e-14
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 151 QNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           QNISESFKALAA +N+ NTTVEVA FSRACSFISPLF CLGIAFKFAEMD
Sbjct: 10  QNISESFKALAANINSGNTTVEVAPFSRACSFISPLFGCLGIAFKFAEMD 59

[Close]
BLAST of MELO3C031298.2 vs. NCBI nr
Match: XP_022930192.1 (accelerated cell death 11 [Cucurbita moschata])

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-13
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 151 QNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           +NISESFKALAATVNAE   VEVA FSRACSFISPLF CLGIAFKFAEMD
Sbjct: 12  RNISESFKALAATVNAETIAVEVAPFSRACSFISPLFGCLGIAFKFAEMD 61

[Close]
BLAST of MELO3C031298.2 vs. TAIR10
Match: AT2G34690.1 (Glycolipid transfer protein (GLTP) family protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 0 

Query: 151 QNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           + IS +FK LA  VN+ N  V V  FS ACS +SPLF CLGIAFKFAEMD
Sbjct: 11  RKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMD 60

[Close]
BLAST of MELO3C031298.2 vs. Swiss-Prot
Match: sp|O64587|ACD11_ARATH (Accelerated cell death 11 OS=Arabidopsis thaliana OX=3702 GN=ACD11 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 0 

Query: 151 QNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           + IS +FK LA  VN+ N  V V  FS ACS +SPLF CLGIAFKFAEMD
Sbjct: 11  RKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMD 60

[Close]
BLAST of MELO3C031298.2 vs. TrEMBL
Match: tr|A0A1S3C6E5|A0A1S3C6E5_CUCME (accelerated cell death 11 OS=Cucumis melo OX=3656 GN=LOC103497566 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 151 QNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           +NISESFKALAATVNAENTTVEVA FSRACSFISPLF CLGIAFKFAEMD
Sbjct: 10  RNISESFKALAATVNAENTTVEVAPFSRACSFISPLFGCLGIAFKFAEMD 59

[Close]
BLAST of MELO3C031298.2 vs. TrEMBL
Match: tr|A0A0A0K8C3|A0A0A0K8C3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341220 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.4e-14
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 151 QNISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           QNISESFKALAA +N+ NTTVEVA FSRACSFISPLF CLGIAFKFAEMD
Sbjct: 10  QNISESFKALAANINSGNTTVEVAPFSRACSFISPLFGCLGIAFKFAEMD 59

[Close]
BLAST of MELO3C031298.2 vs. TrEMBL
Match: tr|A0A067GIQ8|A0A067GIQ8_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027852mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 0 

Query: 153 ISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           ISESFK LAATVN++   VE+A FSRACS++SPLF CLGIAFKFAEMD
Sbjct: 13  ISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60

[Close]
BLAST of MELO3C031298.2 vs. TrEMBL
Match: tr|A0A067GJ03|A0A067GJ03_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027852mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 0 

Query: 153 ISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           ISESFK LAATVN++   VE+A FSRACS++SPLF CLGIAFKFAEMD
Sbjct: 13  ISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60

[Close]
BLAST of MELO3C031298.2 vs. TrEMBL
Match: tr|A0A067G6U0|A0A067G6U0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027852mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 0 

Query: 153 ISESFKALAATVNAENTTVEVALFSRACSFISPLFDCLGIAFKFAEMD 201
           ISESFK LAATVN++   VE+A FSRACS++SPLF CLGIAFKFAEMD
Sbjct: 13  ISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60

The following BLAST results are available for this feature:
BLAST of MELO3C031298.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458024.12.1e-1594.00PREDICTED: accelerated cell death 11 [Cucumis melo] >XP_008458025.1 PREDICTED: a... [more]
XP_022974080.13.9e-1490.00accelerated cell death 11 [Cucurbita maxima][more]
XP_023536602.13.9e-1490.00accelerated cell death 11 [Cucurbita pepo subsp. pepo][more]
XP_004139630.15.1e-1488.00PREDICTED: ceramide-1-phosphate transfer protein [Cucumis sativus] >XP_011659189... [more]
XP_022930192.11.9e-1388.00accelerated cell death 11 [Cucurbita moschata][more]
BLAST of MELO3C031298.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34690.11.1e-1064.00Glycolipid transfer protein (GLTP) family protein[more]
BLAST of MELO3C031298.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O64587|ACD11_ARATH2.0e-0964.00Accelerated cell death 11 OS=Arabidopsis thaliana OX=3702 GN=ACD11 PE=1 SV=1[more]
BLAST of MELO3C031298.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C6E5|A0A1S3C6E5_CUCME1.4e-1594.00accelerated cell death 11 OS=Cucumis melo OX=3656 GN=LOC103497566 PE=4 SV=1[more]
tr|A0A0A0K8C3|A0A0A0K8C3_CUCSA3.4e-1488.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341220 PE=4 SV=1[more]
tr|A0A067GIQ8|A0A067GIQ8_CITSI1.0e-1077.08Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027852mg PE=4 SV=1[more]
tr|A0A067GJ03|A0A067GJ03_CITSI1.0e-1077.08Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027852mg PE=4 SV=1[more]
tr|A0A067G6U0|A0A067G6U0_CITSI1.0e-1077.08Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027852mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036497GLTP_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046836 glycolipid transport
cellular_component GO:0005737 cytoplasm
molecular_function GO:0051861 glycolipid binding
molecular_function GO:0017089 glycolipid transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031298.2.1MELO3C031298.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036497Glycolipid transfer protein superfamilyGENE3DG3DSA:1.10.3520.10coord: 148..220
e-value: 1.5E-12
score: 49.3
IPR036497Glycolipid transfer protein superfamilySUPERFAMILYSSF110004Glycolipid transfer protein, GLTPcoord: 165..203

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031298.2Melon (DHL92) v3.6.1medmedB144
MELO3C031298.2Bottle gourd (USVL1VR-Ls)lsimedB027
MELO3C031298.2Bottle gourd (USVL1VR-Ls)lsimedB375
MELO3C031298.2Watermelon (Charleston Gray)medwcgB376
MELO3C031298.2Watermelon (Charleston Gray)medwcgB378
MELO3C031298.2Watermelon (Charleston Gray)medwcgB390
MELO3C031298.2Watermelon (97103) v1medwmB404
MELO3C031298.2Watermelon (97103) v1medwmB418
MELO3C031298.2Silver-seed gourdcarmedB0240
MELO3C031298.2Silver-seed gourdcarmedB0246
MELO3C031298.2Silver-seed gourdcarmedB0945
MELO3C031298.2Silver-seed gourdcarmedB1060
MELO3C031298.2Cucumber (Chinese Long) v3cucmedB129
MELO3C031298.2Cucumber (Chinese Long) v3cucmedB222
MELO3C031298.2Cucumber (Chinese Long) v3cucmedB224
MELO3C031298.2Watermelon (97103) v2medwmbB374
MELO3C031298.2Watermelon (97103) v2medwmbB378
MELO3C031298.2Watermelon (97103) v2medwmbB391
MELO3C031298.2Wax gourdmedwgoB453
MELO3C031298.2Cucumber (Gy14) v1cgymedB442
MELO3C031298.2Cucumber (Gy14) v2cgybmedB114
MELO3C031298.2Cucumber (Gy14) v2cgybmedB195
MELO3C031298.2Cucumber (Gy14) v2cgybmedB197
MELO3C031298.2Cucumber (Gy14) v1cgymedB429
MELO3C031298.2Cucurbita maxima (Rimu)cmamedB266
MELO3C031298.2Cucurbita maxima (Rimu)cmamedB394
MELO3C031298.2Cucurbita maxima (Rimu)cmamedB657
MELO3C031298.2Cucurbita maxima (Rimu)cmamedB860
MELO3C031298.2Cucurbita maxima (Rimu)cmamedB946
MELO3C031298.2Cucurbita moschata (Rifu)cmomedB250
MELO3C031298.2Cucurbita moschata (Rifu)cmomedB381
MELO3C031298.2Cucurbita moschata (Rifu)cmomedB644
MELO3C031298.2Cucurbita moschata (Rifu)cmomedB854
MELO3C031298.2Cucurbita moschata (Rifu)cmomedB935
MELO3C031298.2Cucurbita pepo (Zucchini)cpemedB166
MELO3C031298.2Cucurbita pepo (Zucchini)cpemedB362
MELO3C031298.2Cucurbita pepo (Zucchini)cpemedB685
MELO3C031298.2Cucurbita pepo (Zucchini)cpemedB825
MELO3C031298.2Cucurbita pepo (Zucchini)cpemedB944
MELO3C031298.2Wild cucumber (PI 183967)cpimedB127
MELO3C031298.2Wild cucumber (PI 183967)cpimedB219
MELO3C031298.2Wild cucumber (PI 183967)cpimedB221
MELO3C031298.2Cucumber (Chinese Long) v2cumedB127
MELO3C031298.2Cucumber (Chinese Long) v2cumedB218
MELO3C031298.2Cucumber (Chinese Long) v2cumedB220