MELO3C031277.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031277.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionZf-RVT domain-containing protein
Locationchr05 : 7701679 .. 7707945 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCATCTATCGTTGCACCGCTCTAATCACCGAAAGACAACCACCCACGCTGCGCGCCTTGAACCACGACGTTTTGAAGCGATTAGTTCGAATCGGCACAATCTATTCGAGTTTCCTCATTGTGTTTTGTTGTTAATTGAGCTGTGCATTACCTAACAATCGTTCGTCGTCATTCGACAAGTCGAATCATTGCTAATTTCGTTCTTTTCAACCCTGTATCCTTGGATCTAAGTTTTTAGGTAAATCTTCTTCATTTTAAATGGATTTCTTGATAAATTTCAATTACCTATTAAATTTCAACATGGTTTTTACGATACCCATTACAGTTTAATGTTAGATTCATGTTTTAAAGAAGTTCGAACCACTGCCCAGCAGTTTAAAAGCTCAAATTTGGGCGTTTTGGTACAACTTGGGTAAGATTCAATGCTTTATGGACCGGGTCTTAAGTACTCATCTAATTTTAGTAATGATATTGATTAACCAATGATGTCGGATGCTTGATTTTAACCTTAGAATGTGGTTAGGATATTGCCCATGGAAGTTAAGAGTACTTTAATTGGTTCTTGACAAGTTTTGGAGTAATTTAAGTGAATTTTCTTTGAGTTCTTGCATACCCATTGAATCTAAGCATTTAGATTAGATTACTCATAAGACTCGGGTCCGAAAGTTGAACATTTGAGGTCAAGAAGGGACTTTCTTCTAACTTTAGAGATTTGTTTGGTTGTTGCGTGTATAAGTTTCGAACACACAATAGTTTTAGATCATAGATTCGAATTTAGAAAGGCGTTAACGTGTTATCAAGGCGATTTTGACAAGTGTTTGATAAGGTTGTAGATAAATTTAGCGTGTTCTCTCATAGTTCTTAAATATCCACTTCGTGTTAGCGCGGACTTGATTTTACCCATAATGTTTGAATGGAAAATTGGTTGGACTTTTTTAGAGAACTATGAAGCATTGTTCACTGCACTTAAGATTGTTTAAGACAAGTATGGAAAATCTCTTAAGATATTGACTTGTTACTTTGACGTTGAGTTTGTTATTAAATGATCTAAATCTCTCACATTATTGATATTGCAACTAAGAGAACATTAATATACAAGACCCATTAAGTATATACTAAGTTTGGATCCTCATCTTGTTAAGAGTTTAATGTGAAGTTTAAGGTTCAAGGGTGGAATGTTTAGCCTAGACTAAAGCATTTAGGAGAAATTTCAATTTAGAACTTGGAAAACTTGGTCAACACGGTTGAGGTTATTTTAGATGAGTTTTTTGGGGTAGGTTTCTAAGTTATTGACCCGTTAGATTGTTGTTGAGATTGTTAATGGATTTAAACCTCTAAGGTATGAAAATAGGACATAAGAGTGTGGATTTAAAAGACGACTTAAGTTTGAGTGCTTTGTGGCATTAAGAGTTTAAGTTGAAGTTTAAAGGTCTCTTGTGTGATATAATGGATATAAAACCCAAAACATCATCGATAATGGAGATAAAAGTGTTTTTACATAAAAGACTCGTTGAGTTTGAACTAAATTGGATGTTTATGTGGTTAAGCATCTAGATTTCATGTATAAGGGTTCGTAGGTGAAAATTCTAGCCTAATCTAAGACGAATTGAGAATTTAAAACTTTAGAAACTAAAATAAGTTTGATTTGACCTTATGAAGTATGTTGAAGATTGTTGTGTCGTCTCCCTTTGTGAAGATAATTAATAGATCCTAATCGTTGTTTCAGGCCAAATTGAAGTGGGGAAAGCATATAATCCTGGGGGATCGAGTCATTGATTGTGAGTGGCTTATTTTTAAGCTTTGTTTATACATATACACATTATCTCTTGATATTGCTTGGAAACTACCATGACCTAAATCGTTTATGACCACGTTTTCATTTATGTTTAAACAATGTGTTTACGCATCGTGATTTAATGAATGTTATGACTTGGAGTTTATAGAAAACGGGTTTCAACCTTCTGTTTTCGATTACACTTAAACGATGTGTTTGTTCGTCACGATTGTAAGAATGTGCATGGCTTGAACTTTTTAAAATCGTATTTGAAGTTTTTATTATACTTGGTTTTGAAATATGGTTAACTGATGCTTATGGTGAACGAGAAGGTGATTTCCCTAAGCTACGTGACTGTGTTTCCGTAGCGCTACTTATGGTTGTCAGGGGGTTCCGGGGCTGAAAGAGGCTGTGACTGAAGATCCGAGAACCTGAGCCTAAGTGAGGACATGGATGGAAGATTATGATATGGCTTCGGACCTAGCTTAACCTATGGTTGGGTGGCACTATGTGCACATAGGAGCGGTATATAGTTACTATGGTAGGTGCTAAGTGTGCATGAGCTCCGTTTGGCCGTGTGTTTCCTTGTGGATATGGAGCATGTGTGAGCTATTGTCGGGTCGTATGCTTAGTATGCTATCATGGTTGGTTTGGATTGGTTGATGGTTTCTATCATGGTGGGTACTAAGGATGTGTGAGCTAGTTTTGGCCGCATGATTCTTTATCATGTACGAGCTATCTTTTGTCGTATCTTTAGATGCCTTGCCATGGTTGTATGGATTACAGATTTGTTGGTGGTCTAATGGCTATGAGTTAATGACATTTTTCATTAATATCATATTTTTAATGCATATTTATAATTCTCCTCTTTAAGTATGTTTTATGAGCTTTAAATTTAAGAAAACTTGCCACTCATTGAGTATTTGACTTATGGTTTATTGTTTTCTTTCCCCCCCTCAGGTAGCGATAATGTATATAGTTATCTTTTGTAATACATCAGGGAGTGGTTAGATCGTAGCGAGAGTAAGGTTAAGAACTCGTGTTTTAGGAAGATCCCTCTTTTGGTTGAATTATTCTGTACGACATATCTAATTAGAGTATGGTTCTCTGTCTGAAACTCTAGAACTATGGAATTATCTGGAAGTGTGTAGTGAGACACACTTGATGCATTGTGAATTCTGTAGTTGTTATTACTTTTATGAAAGTGAAATTTCTCCCCTTTATAGGTTTGGCTAACCCATATTTTAGAGGAGGTGCTGTCGAAATTTTTATAGAATTCTTGAAAACCATTTTATCAATCATACCTTTAAAAAAGGGGGGGTTACGGGTTGTTTAAAGTAATAGATTAACTACGATCTGGGTTAGAAGGGAGCTTAGAACGGGGTGTGACATAGGTAGTTTGAGATGAGGTGTGGCACAATAAAGACAAGAAAGTTAACCTTTTCCATGCAAAAATTACACTTGCTGAAGTTAGTATAAAGCCTCAATTTTCTATGTGTAATTCAAGTTTACTTAACATGCTTCTCATGATCAATCAGAGTCTTTAAATAAATCAAAGTATCATCAAAGTAAACAACAAAAATTTGTCCAAAAAATGATTCATCAAACGCATAAATGTACTAGGAGCATTAGTTAAAACAAAAGATATAACAAACCATTCATACAATCCAAATTTAGTTTTGAAGACAATTTTCCATTCATCCCCTTCATGCATTCTAACTTGATGATATCCAGATTTCAAATCAATCTTTGTCGAGAAACATGAACCATGCAATTCATAAAACATACCATCTAGCCTACAAATAGGATGACGATACTTTGTAGTGATATTGTTGTCGGCCCTACAGTCCAAACACATGCGCCAAGTTTCATCCTTCTTTGGCACTAATAAAACCGGTATAGAACATGGGCTTAAGTTTTTGCGTACATACCACTTCTCCACGAGCTCCTCCACTCGCCTTTGAATTTCTTTTGTCTCAGTTGGATTTACTCTTCAAATTCCTGCAAAAGAGATTGAAACACACTAGGCAAAGACAAGTTAACATTAGAGGCCAAATGCCCTTCCTTATACCATAAGCGAAAAGATTGATGTTTAGGAAAACATTTCCCTCCTCACTTCTTTCACTTTTTCCAAACAACTCACCTTACCTCTTTTTTTTTTTTTTGTTTTTTCTATTTTGTCTTTTCTACTTTTTACTTCCACTNNNNNNNNNNNNNNNNNNNNNNNNACCTTACCTTTCTTTTTTTTTTGGTTTTTTTTCATTTTGCTTTTCACTTTTTACTCCACTCTTTTTTCCTTGTACATTTTTGTCTAATTTTTCACTCACCTTTTTTTTTTTTACCTCACAGTTTTTCTTTAAATTCTTTCCTTTTTCTCTCCAACTTTAGTTGATTGGGAAATATATCCTTCGAACATAAAGGAACAAGAGTTGTTTTCCTTCCATCTTCTGTATAAGAATACTTATTCAAGTGCCCATCATTCAAAACTTTCGATTAAATTGTCACGATCGCCCAAGCAAGATATCTCCAACATGCATACCTAAGACATCACATAGGACCTCATCTTTATACTTTCCCAGGGTGAAAGAAAATAAAGCTTGAGAAACTACCTTTGATTGTTCTAGTATCATTGAGCCATTGAAGCTTGTTAGGCTTAGGATGATGTTGAGTTGGAATTTGCAATTGTTTGATAAGAAACATACTAACAAGATTCGTGCAACTTCTATTGCCAATTACAATACTACGAGGCATCCCATTAACTAAACACCTTGAGTGGAAAAGATTATCTGTTTGATCTTCAATATCATTGTCCTTAACTTAAGCACTTAGAAGACTTCTTGTAACAAGTGTCAATTTACTCCCATCTTCTAGTTCTTCATCATTTTCTTCAATTGCTTCTTCAATTAGCTCGTCTTCCTCACTTTCTTCTCCATTGGTGACAACTTCACCATCTTCAATGATCATGGTTTTTTCATTTGGACAATCACTAGCATCTATATGTCCAATCCCTTGATGTTTTCAACATTCTTGTCTCGATTCTTTTCTCGAACTTCCTTTGATCCATCCAAATTTTCTTTACCTTTGGAGCTCTCAGCCTTATCTTTCTTTTCAAACTCAAATTTCTTTTAGGTTTGAAATCCACTTTTCTACTATTCTAACTCTTTTGCCACGTAGTAGTAGAAAAAGAAGTAGATTTAGAAGAAACATACCACTTAAAGTGCATCTTCTCCTAAGCTAATTGGCCTTCAATTTTGACAGCAAGGTGTAACGACTCTTTCATATCAAAGTAAGTTTGTCTATCCACTTGGTTGGCCAAGTCTCAGTTCATTCCTCCAAAGAATCTTTCCATTGTATCATCTTCATCTTCATAAATATTGGTTCTATTCATAAGGGTTTTACATTTCTTTATAATAGTCATCCACACTTTTGGATCCTTATTGTAAGGAGTAAAGTTATTGCTTGAGTTCTCGAATGTAGTGCTTAGGAATGTACCTCCTTCGTATTAGAACTTTTAATTCCTCTCAAGTTTCAATTGGCTCTTCATAATTCCTTCTCCATTAAAGTTTTAATGATGTCCACCGAACACTTGCATAATCCACAAATTTAGCTACAATAAGCTTCCTTTTCCTTTCTTCACTAAAATTATGGCAATAAAAAACATGCTTAATTTTTCTCTCATATTAAACATATTCCTCCAGATCTGTTGTCCCATGGAAAGTAGGAATTGTGAGCTTCACTCCTCTTATCTATTTTTCTTCTCTTCTTTCATTTTAGTACTCCCTTTTAACCCTTCTTTCTTATAACATGCCCCTTCCCTCTCTTCTTCCTCTTCTTCTACCTTGGCCTAACACTCTCCTCCCTCTTGGATTTTTTCCGTTTAAAAGGGTTTCGTTATCCTCATCCTCTTCATTTTCAACTCCTTTGTTCAAGACTTCCCCTTAGTAACGATTCTTTAAAGTTACCTCCATCCTTTCTAATCGATTTGTTAAGTCATTAATTACTTGAGTTAAATGAACAATTGCTCCTCCTTGTGCTTCTATCCTCACAGCTTCACTAATCTCCATACCATTTTCTGATTCTTGATTCATAATGAACAGATTAAAAGGGACCTCACACACTCAACTCACTAATTGTTCACTTGGAACACTCGTGTTTACACACAAATGGTAGGCTATTTGGGAAGTAGCTAAATTATGATATTGGGTAAACCTATGAAATCCTTAAACTAGTGAGCTATTCAATATAAGCAAGGCAAGATGATTCTTGATTCATAGTGGTCGGTTGATTGTGGAGTGGGTCGGTCTTGGTTCCTTCGGGCTATCTTGCACTAGTGTGATAGGCAAAAAGAACATGCCAGGCTAGATGTTAGTGATGGTAGAAGGTTTAGAATGTGGCTTAATCCGTGGTTGCAAGGAGGTGCGATCTTTGAGCAGGTTGGGAAACAGGTGCTATATGATGCAGCGAGTCGATGGGTGATAAGAAACCCCTAG

mRNA sequence

ATGCCCATCTATCGTTGCACCGCTCTAATCACCGAAAGACAACCACCCACGCTGCGCGCCTTGAACCACGACGTTTTGAAGCGATTAGTTCGAATCGGCACAATCTATTCGAGTTTCCTCATTAAGTTCGAACCACTGCCCAGCAGTTTAAAAGCTCAAATTTGGGCGTTTTGGTACAACTTGGTTTTTATTATACTTGGTTTTGAAATATGGTTAACTGATGCTTATGGTGAACGAGAAGGTGATTTCCCTAAGCTACGTGACTGTGTTTCCGTAGCGCTACTTATGTGTGATAGGCAAAAAGAACATGCCAGGCTAGATGTTAGTGATGGTAGAAGGTTTAGAATGTGGCTTAATCCGTGGTTGCAAGGAGGTGCGATCTTTGAGCAGGTTGGGAAACAGGTGCTATATGATGCAGCGAGTCGATGGGTGATAAGAAACCCCTAG

Coding sequence (CDS)

ATGCCCATCTATCGTTGCACCGCTCTAATCACCGAAAGACAACCACCCACGCTGCGCGCCTTGAACCACGACGTTTTGAAGCGATTAGTTCGAATCGGCACAATCTATTCGAGTTTCCTCATTAAGTTCGAACCACTGCCCAGCAGTTTAAAAGCTCAAATTTGGGCGTTTTGGTACAACTTGGTTTTTATTATACTTGGTTTTGAAATATGGTTAACTGATGCTTATGGTGAACGAGAAGGTGATTTCCCTAAGCTACGTGACTGTGTTTCCGTAGCGCTACTTATGTGTGATAGGCAAAAAGAACATGCCAGGCTAGATGTTAGTGATGGTAGAAGGTTTAGAATGTGGCTTAATCCGTGGTTGCAAGGAGGTGCGATCTTTGAGCAGGTTGGGAAACAGGTGCTATATGATGCAGCGAGTCGATGGGTGATAAGAAACCCCTAG

Protein sequence

MPIYRCTALITERQPPTLRALNHDVLKRLVRIGTIYSSFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASRWVIRNP
Homology
[Close]
BLAST of MELO3C031277.2 vs. NCBI nr
Match: XP_008452126.1 (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-10
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0 

Query: 30  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRD 89
           +R GT +  +  +K   L  +    +W  W    +++ G  +W  D+   R         
Sbjct: 654 IRDGTAWKFASTLKILWLMLTNSGSLWVAWVE-AYVLKGRSLWDVDSRVGRSW------- 713

Query: 90  CVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR 143
           C+   L   ++ K+H R+ V +G R R+WL+PWLQ GAI E+VG++VLYDAASR
Sbjct: 714 CLRAILRKQEKLKQHVRMKVGNGNRCRVWLDPWLQRGAILERVGERVLYDAASR 759

[Close]
BLAST of MELO3C031277.2 vs. TrEMBL
Match: tr|A0A1S3BSI8|A0A1S3BSI8_CUCME (uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.7e-11
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0 

Query: 30  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRD 89
           +R GT +  +  +K   L  +    +W  W    +++ G  +W  D+   R         
Sbjct: 654 IRDGTAWKFASTLKILWLMLTNSGSLWVAWVE-AYVLKGRSLWDVDSRVGRSW------- 713

Query: 90  CVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR 143
           C+   L   ++ K+H R+ V +G R R+WL+PWLQ GAI E+VG++VLYDAASR
Sbjct: 714 CLRAILRKQEKLKQHVRMKVGNGNRCRVWLDPWLQRGAILERVGERVLYDAASR 759

The following BLAST results are available for this feature:
BLAST of MELO3C031277.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008452126.11.3e-1035.09PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo][more]
BLAST of MELO3C031277.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031277.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031277.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BSI8|A0A1S3BSI8_CUCME8.7e-1135.09uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031277.2.1MELO3C031277.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031277.2Cucumber (Gy14) v2cgybmedB195
MELO3C031277.2Cucumber (Gy14) v2cgybmedB197
MELO3C031277.2Cucumber (Gy14) v1cgymedB429
MELO3C031277.2Cucurbita maxima (Rimu)cmamedB266
MELO3C031277.2Cucurbita maxima (Rimu)cmamedB394
MELO3C031277.2Cucurbita maxima (Rimu)cmamedB657
MELO3C031277.2Cucurbita maxima (Rimu)cmamedB860
MELO3C031277.2Cucurbita maxima (Rimu)cmamedB946
MELO3C031277.2Cucurbita moschata (Rifu)cmomedB250
MELO3C031277.2Cucurbita moschata (Rifu)cmomedB381
MELO3C031277.2Cucurbita moschata (Rifu)cmomedB644
MELO3C031277.2Cucurbita moschata (Rifu)cmomedB854
MELO3C031277.2Cucurbita moschata (Rifu)cmomedB935
MELO3C031277.2Cucurbita pepo (Zucchini)cpemedB166
MELO3C031277.2Cucurbita pepo (Zucchini)cpemedB362
MELO3C031277.2Cucurbita pepo (Zucchini)cpemedB685
MELO3C031277.2Cucurbita pepo (Zucchini)cpemedB825
MELO3C031277.2Cucurbita pepo (Zucchini)cpemedB944
MELO3C031277.2Wild cucumber (PI 183967)cpimedB219
MELO3C031277.2Wild cucumber (PI 183967)cpimedB221
MELO3C031277.2Cucumber (Chinese Long) v2cumedB218
MELO3C031277.2Cucumber (Chinese Long) v2cumedB220
MELO3C031277.2Melon (DHL92) v3.6.1medmedB144
MELO3C031277.2Bottle gourd (USVL1VR-Ls)lsimedB027
MELO3C031277.2Bottle gourd (USVL1VR-Ls)lsimedB375
MELO3C031277.2Watermelon (Charleston Gray)medwcgB376
MELO3C031277.2Watermelon (Charleston Gray)medwcgB378
MELO3C031277.2Watermelon (Charleston Gray)medwcgB390
MELO3C031277.2Watermelon (97103) v1medwmB404
MELO3C031277.2Watermelon (97103) v1medwmB418
MELO3C031277.2Silver-seed gourdcarmedB0240
MELO3C031277.2Silver-seed gourdcarmedB0246
MELO3C031277.2Silver-seed gourdcarmedB0945
MELO3C031277.2Silver-seed gourdcarmedB1060
MELO3C031277.2Cucumber (Chinese Long) v3cucmedB222
MELO3C031277.2Cucumber (Chinese Long) v3cucmedB224
MELO3C031277.2Watermelon (97103) v2medwmbB374
MELO3C031277.2Watermelon (97103) v2medwmbB378
MELO3C031277.2Watermelon (97103) v2medwmbB391
MELO3C031277.2Wax gourdmedwgoB453