MELO3C031209.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031209.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionacyl-CoA-binding domain-containing protein 4
Locationchr05 : 15234670 .. 15234898 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCGATGGCGAGGGCGAGCTCCGACTTGCAATATCCCGACCGGTTCTACATTGCAGCTTCTTATGCCGGTTTTGATGGATCACTAAAATCGTCTTCAAAGGCCCTCAGGTCTATGTTCTCCGATGAGGCCGCTTTGTTACTTTATGGCTTGTATCAGCAGGTACTACCACATGTTCTTACACCTGTGACTTACCGGTGCTGTTTCAGTTTGTGTTGAGGTTTGA

mRNA sequence

ATGGCTGCGATGGCGAGGGCGAGCTCCGACTTGCAATATCCCGACCGGTTCTACATTGCAGCTTCTTATGCCGGTTTTGATGGATCACTAAAATCGTCTTCAAAGGCCCTCAGGTCTATGTTCTCCGATGAGGCCGCTTTGTTACTTTATGGCTTGTATCAGCAGGTACTACCACATGTTCTTACACCTGTGACTTACCGGTGCTGTTTCAGTTTGTGTTGAGGTTTGA

Coding sequence (CDS)

ATGGCTGCGATGGCGAGGGCGAGCTCCGACTTGCAATATCCCGACCGGTTCTACATTGCAGCTTCTTATGCCGGTTTTGATGGATCACTAAAATCGTCTTCAAAGGCCCTCAGGTCTATGTTCTCCGATGAGGCCGCTTTGTTACTTTATGGCTTGTATCAGCAGGTACTACCACATGTTCTTACACCTGTGACTTACCGGTGCTGTTTCAGTTTGTGTTGA

Protein sequence

MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQVLPHVLTPVTYRCCFSLC
Homology
[Close]
BLAST of MELO3C031209.2 vs. NCBI nr
Match: XP_004144782.1 (PREDICTED: acyl-CoA-binding domain-containing protein 4 isoform X1 [Cucumis sativus] >KGN60945.1 hypothetical protein Csa_2G030060 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 3.5e-17
Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MAAMARASS LQYPDRFY AASYAGFDGS KSSSKALRS FSDEAALLLYGLYQQ
Sbjct: 1  MAAMARASSGLQYPDRFYAAASYAGFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 55

[Close]
BLAST of MELO3C031209.2 vs. NCBI nr
Match: XP_008454338.1 (PREDICTED: acyl-CoA-binding domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 3.5e-17
Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MAAMARASS LQYPDRFY AASYAGFDGS KSSSKALRS FSDEAALLLYGLYQQ
Sbjct: 1  MAAMARASSGLQYPDRFYAAASYAGFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 55

[Close]
BLAST of MELO3C031209.2 vs. NCBI nr
Match: XP_011648837.1 (PREDICTED: acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 3.5e-17
Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MAAMARASS LQYPDRFY AASYAGFDGS KSSSKALRS FSDEAALLLYGLYQQ
Sbjct: 1  MAAMARASSGLQYPDRFYAAASYAGFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 55

[Close]
BLAST of MELO3C031209.2 vs. NCBI nr
Match: XP_022946642.1 (acyl-CoA-binding domain-containing protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 6.0e-17
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MAAMARASS LQYPDRFY AASYAGFDGS KSSSKA+RS FSDEAALLLYGLYQQ
Sbjct: 1  MAAMARASSGLQYPDRFYAAASYAGFDGSPKSSSKAIRSRFSDEAALLLYGLYQQ 55

[Close]
BLAST of MELO3C031209.2 vs. NCBI nr
Match: XP_022946643.1 (acyl-CoA-binding domain-containing protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 6.0e-17
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MAAMARASS LQYPDRFY AASYAGFDGS KSSSKA+RS FSDEAALLLYGLYQQ
Sbjct: 1  MAAMARASSGLQYPDRFYAAASYAGFDGSPKSSSKAIRSRFSDEAALLLYGLYQQ 55

[Close]
BLAST of MELO3C031209.2 vs. TAIR10
Match: AT5G27630.1 (acyl-CoA binding protein 5)

HSP 1 Score: 63.2 bits (152), Expect = 7.9e-11
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MA M RASS L YP+RFY AASY G DGS +SS K L S FS++ +LLLY L+QQ
Sbjct: 1  MAHMVRASSGLSYPERFYAAASYVGLDGS-QSSVKQLSSKFSNDTSLLLYTLHQQ 54

[Close]
BLAST of MELO3C031209.2 vs. TAIR10
Match: AT3G05420.2 (acyl-CoA binding protein 4)

HSP 1 Score: 59.7 bits (143), Expect = 8.7e-10
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 0 

Query: 3  AMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          AM RA+S   YP+RFY AASY G DGS  SS+K + S F D+ ALLLY LYQQ
Sbjct: 2  AMPRATSGPAYPERFYAAASYVGLDGS-DSSAKNVISKFPDDTALLLYALYQQ 53

[Close]
BLAST of MELO3C031209.2 vs. Swiss-Prot
Match: sp|Q8RWD9|ACBP5_ARATH (Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=ACBP5 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-09
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MA M RASS L YP+RFY AASY G DGS +SS K L S FS++ +LLLY L+QQ
Sbjct: 1  MAHMVRASSGLSYPERFYAAASYVGLDGS-QSSVKQLSSKFSNDTSLLLYTLHQQ 54

[Close]
BLAST of MELO3C031209.2 vs. Swiss-Prot
Match: sp|Q9MA55|ACBP4_ARATH (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=ACBP4 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-08
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 0 

Query: 3  AMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          AM RA+S   YP+RFY AASY G DGS  SS+K + S F D+ ALLLY LYQQ
Sbjct: 2  AMPRATSGPAYPERFYAAASYVGLDGS-DSSAKNVISKFPDDTALLLYALYQQ 53

[Close]
BLAST of MELO3C031209.2 vs. Swiss-Prot
Match: sp|Q75LJ4|ACBP6_ORYSJ (Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP6 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.0e-08
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0 

Query: 7  ASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          ASS L YPDRFY AA+YAGF     +SS A+ S F ++ ALLLYGLYQQ
Sbjct: 2  ASSGLAYPDRFYAAAAYAGFGAGGATSSSAI-SRFQNDVALLLYGLYQQ 49

[Close]
BLAST of MELO3C031209.2 vs. TrEMBL
Match: tr|A0A1S3BZ54|A0A1S3BZ54_CUCME (acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103494768 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-17
Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MAAMARASS LQYPDRFY AASYAGFDGS KSSSKALRS FSDEAALLLYGLYQQ
Sbjct: 1  MAAMARASSGLQYPDRFYAAASYAGFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 55

[Close]
BLAST of MELO3C031209.2 vs. TrEMBL
Match: tr|A0A0A0LFW3|A0A0A0LFW3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030060 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-17
Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MAAMARASS LQYPDRFY AASYAGFDGS KSSSKALRS FSDEAALLLYGLYQQ
Sbjct: 1  MAAMARASSGLQYPDRFYAAASYAGFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 55

[Close]
BLAST of MELO3C031209.2 vs. TrEMBL
Match: tr|A0A2P6R714|A0A2P6R714_ROSCH (Putative FERM/acyl-CoA-binding protein, 3-helical bundle OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0455341 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.5e-13
Identity = 41/55 (74.55%), Postives = 49/55 (89.09%), Query Frame = 0 

Query: 1  MAAMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          MA+MARASS LQYP+RFY AASYAGFDGS +SSSKA+R+ F+ E+AL+LY LYQQ
Sbjct: 1  MASMARASSGLQYPERFYAAASYAGFDGSPRSSSKAVRAKFNSESALILYALYQQ 55

[Close]
BLAST of MELO3C031209.2 vs. TrEMBL
Match: tr|M5WQY4|M5WQY4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322800 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.0e-13
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 0 

Query: 3  AMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          AMARASS LQYP+RFY AASYAGFDGS +SSSKA+RS F+ E+AL+LY LYQQ
Sbjct: 2  AMARASSGLQYPERFYAAASYAGFDGSPRSSSKAVRSKFNSESALILYALYQQ 54

[Close]
BLAST of MELO3C031209.2 vs. TrEMBL
Match: tr|A0A251NYR2|A0A251NYR2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322800 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.0e-13
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 0 

Query: 3  AMARASSDLQYPDRFYIAASYAGFDGSLKSSSKALRSMFSDEAALLLYGLYQQ 56
          AMARASS LQYP+RFY AASYAGFDGS +SSSKA+RS F+ E+AL+LY LYQQ
Sbjct: 2  AMARASSGLQYPERFYAAASYAGFDGSPRSSSKAVRSKFNSESALILYALYQQ 54

The following BLAST results are available for this feature:
BLAST of MELO3C031209.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144782.13.5e-1792.73PREDICTED: acyl-CoA-binding domain-containing protein 4 isoform X1 [Cucumis sati... [more]
XP_008454338.13.5e-1792.73PREDICTED: acyl-CoA-binding domain-containing protein 4 [Cucumis melo][more]
XP_011648837.13.5e-1792.73PREDICTED: acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis sati... [more]
XP_022946642.16.0e-1790.91acyl-CoA-binding domain-containing protein 4-like isoform X1 [Cucurbita moschata... [more]
XP_022946643.16.0e-1790.91acyl-CoA-binding domain-containing protein 4-like isoform X2 [Cucurbita moschata... [more]
BLAST of MELO3C031209.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G27630.17.9e-1163.64acyl-CoA binding protein 5[more]
AT3G05420.28.7e-1062.26acyl-CoA binding protein 4[more]
BLAST of MELO3C031209.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8RWD9|ACBP5_ARATH1.4e-0963.64Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9MA55|ACBP4_ARATH1.6e-0862.26Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q75LJ4|ACBP6_ORYSJ6.0e-0863.27Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=... [more]
BLAST of MELO3C031209.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BZ54|A0A1S3BZ54_CUCME2.3e-1792.73acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A0A0LFW3|A0A0A0LFW3_CUCSA2.3e-1792.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030060 PE=4 SV=1[more]
tr|A0A2P6R714|A0A2P6R714_ROSCH3.5e-1374.55Putative FERM/acyl-CoA-binding protein, 3-helical bundle OS=Rosa chinensis OX=74... [more]
tr|M5WQY4|M5WQY4_PRUPE6.0e-1377.36Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322800 PE=4 SV=1[more]
tr|A0A251NYR2|A0A251NYR2_PRUPE6.0e-1377.36Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322800 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0000062 fatty-acyl-CoA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031209.2.1MELO3C031209.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031209.2Cucumber (Gy14) v2cgybmedB123
MELO3C031209.2Cucumber (Gy14) v1cgymedB316
MELO3C031209.2Cucurbita maxima (Rimu)cmamedB193
MELO3C031209.2Cucurbita maxima (Rimu)cmamedB833
MELO3C031209.2Cucurbita moschata (Rifu)cmomedB184
MELO3C031209.2Cucurbita moschata (Rifu)cmomedB823
MELO3C031209.2Cucurbita pepo (Zucchini)cpemedB131
MELO3C031209.2Cucurbita pepo (Zucchini)cpemedB916
MELO3C031209.2Wild cucumber (PI 183967)cpimedB135
MELO3C031209.2Cucumber (Chinese Long) v2cumedB135
MELO3C031209.2Bottle gourd (USVL1VR-Ls)lsimedB125
MELO3C031209.2Watermelon (Charleston Gray)medwcgB364
MELO3C031209.2Watermelon (97103) v1medwmB416
MELO3C031209.2Silver-seed gourdcarmedB0173
MELO3C031209.2Silver-seed gourdcarmedB0493
MELO3C031209.2Cucumber (Chinese Long) v3cucmedB137
MELO3C031209.2Watermelon (97103) v2medwmbB363
MELO3C031209.2Wax gourdmedwgoB460