MELO3C031183.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031183.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr05 : 4289943 .. 4290983 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCACTTTCCTTCTTCAAAATCACTCCCTTTCCTTCTTCGCGCACACTCCCCTTTCCTTCTTTAAAATTCCTTCCCTCACGAATGACAAACGACACACGATGAAAACCCCAACCTTAACCCCATTCTTCTTATCTCCACGTCATTTCTTCTTGGTGACGGAGACCTACGGCGAGAAGACCCATAGCGTCGCCAGTGAGTTCTTGATCTTTCTTTTTCGTTTTTTCTCCCTCCATTTATCTCTTCCCCTGTGCAATGTCCCATAAATTACCTTGATAAATTCAAGAGGAAGTAGGGTTCTTAGAGACATATAAAGAGCACCGATTTCTTGTCTTCTTTGCCTCTCCCTTTCTCTTCCTAACTCAACAATGCCTTTGTCCATTCTCTAAGGTACCGTAACTCAAAAACGCATTTTAACTATTTTGTGATTCTTTAAAGGTATATTGATGGTTTTGTGAAATATATTGTTGGCTGTGTGATGAAGCATTTTGGTAGCTTACAATGTGTTTGATGAAATGTCTCAATGAAGCCTTTGGTTGATTTTTAATTGATTTTTGTTTGTTTGAATTAGGAAATCAAGGCCAAGGGAGATTTCATGGCTATGGAGGAAGCTTTGAGAAAAAGAGAATGAAAATAAATGGTTAGATTTTAAACTTTGATGATATGTAGGGCCTTTAAGAATTTTCTAGAGTTTAGTTGTTACGATCATACATGTTTAGTGTTAGGTTTTATTTCTAGTAGTGCAGGAATTTCAATCTCTCTCTTATTGAAAAGAATATTTAGTCTTAGGATGTATTTAGGATTGTTTCTCAAGTAATAAATTTTGGAATGAATGGAAAATTATTTGGATACTTGGTTCTATATTATGCTATGGTTTCTTACATAGCACTTTAACATTACAAGAGACGGGGGTACTCCCGACGTCAAAGAACGTCGACGAAAATGAAAAGTACGTCGGAAAAGGATATCCTGACGTATCAAACGGCGTCGGGAAGAACGTCGAGAGAAAGGCGTCGGGAGAGGATTTCCCGAAGCCGTGTTAG

mRNA sequence

CTCACTTTCCTTCTTCAAAATCACTCCCTTTCCTTCTTCGCGCACACTCCCCTTTCCTTCTTTAAAATTCCTTCCCTCACGAATGACAAACGACACACGATGAAAACCCCAACCTTAACCCCATTCTTCTTATCTCCACGTCATTTCTTCTTGGTGACGGAGACCTACGGCGAGAAGACCCATAGCGTCGCCAGAAATCAAGGCCAAGGGAGATTTCATGGCTATGGAGGAAGCTTTGAGAAAAAGAGAATGAAAATAAATGAGACGGGGGTACTCCCGACGTCAAAGAACGTCGACGAAAATGAAAAGTACGTCGGAAAAGGATATCCTGACGTATCAAACGGCGTCGGGAAGAACGTCGAGAGAAAGGCGTCGGGAGAGGATTTCCCGAAGCCGTGTTAG

Coding sequence (CDS)

ATGAAAACCCCAACCTTAACCCCATTCTTCTTATCTCCACGTCATTTCTTCTTGGTGACGGAGACCTACGGCGAGAAGACCCATAGCGTCGCCAGAAATCAAGGCCAAGGGAGATTTCATGGCTATGGAGGAAGCTTTGAGAAAAAGAGAATGAAAATAAATGAGACGGGGGTACTCCCGACGTCAAAGAACGTCGACGAAAATGAAAAGTACGTCGGAAAAGGATATCCTGACGTATCAAACGGCGTCGGGAAGAACGTCGAGAGAAAGGCGTCGGGAGAGGATTTCCCGAAGCCGTGTTAG

Protein sequence

MKTPTLTPFFLSPRHFFLVTETYGEKTHSVARNQGQGRFHGYGGSFEKKRMKINETGVLPTSKNVDENEKYVGKGYPDVSNGVGKNVERKASGEDFPKPC
Homology
[Close]
BLAST of MELO3C031183.2 vs. NCBI nr
Match: ADN33678.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 67.0 bits (162), Expect = 4.1e-08
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 51  MKINETGVLPTSKNVDENEKYVGKGYPDVSNGVGKNVERKASGEDFPKP 100
           + + E  VLPT K V EN KYVGKGYPDV NGVGKNV R AS E FP P
Sbjct: 24  LSLQEMWVLPTHKYVGENAKYVGKGYPDVQNGVGKNVGRNASREAFPTP 72

[Close]
BLAST of MELO3C031183.2 vs. TrEMBL
Match: tr|E5GB35|E5GB35_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-08
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 51  MKINETGVLPTSKNVDENEKYVGKGYPDVSNGVGKNVERKASGEDFPKP 100
           + + E  VLPT K V EN KYVGKGYPDV NGVGKNV R AS E FP P
Sbjct: 24  LSLQEMWVLPTHKYVGENAKYVGKGYPDVQNGVGKNVGRNASREAFPTP 72

The following BLAST results are available for this feature:
BLAST of MELO3C031183.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33678.14.1e-0867.35hypothetical protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C031183.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031183.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031183.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GB35|E5GB35_CUCME2.7e-0867.35Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031183.2.1MELO3C031183.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..100

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031183.2Cucumber (Gy14) v2cgybmedB116
MELO3C031183.2Cucumber (Gy14) v2cgybmedB121
MELO3C031183.2Cucumber (Gy14) v2cgybmedB198
MELO3C031183.2Cucumber (Gy14) v1cgymedB430
MELO3C031183.2Cucumber (Gy14) v1cgymedB629
MELO3C031183.2Cucurbita maxima (Rimu)cmamedB267
MELO3C031183.2Cucurbita maxima (Rimu)cmamedB395
MELO3C031183.2Cucurbita maxima (Rimu)cmamedB861
MELO3C031183.2Cucurbita maxima (Rimu)cmamedB947
MELO3C031183.2Cucurbita moschata (Rifu)cmomedB251
MELO3C031183.2Cucurbita moschata (Rifu)cmomedB382
MELO3C031183.2Cucurbita moschata (Rifu)cmomedB855
MELO3C031183.2Cucurbita moschata (Rifu)cmomedB937
MELO3C031183.2Cucurbita pepo (Zucchini)cpemedB167
MELO3C031183.2Cucurbita pepo (Zucchini)cpemedB363
MELO3C031183.2Cucurbita pepo (Zucchini)cpemedB686
MELO3C031183.2Cucurbita pepo (Zucchini)cpemedB945
MELO3C031183.2Wild cucumber (PI 183967)cpimedB136
MELO3C031183.2Wild cucumber (PI 183967)cpimedB130
MELO3C031183.2Wild cucumber (PI 183967)cpimedB222
MELO3C031183.2Cucumber (Chinese Long) v2cumedB130
MELO3C031183.2Cucumber (Chinese Long) v2cumedB136
MELO3C031183.2Cucumber (Chinese Long) v2cumedB221
MELO3C031183.2Melon (DHL92) v3.6.1medmedB145
MELO3C031183.2Bottle gourd (USVL1VR-Ls)lsimedB028
MELO3C031183.2Bottle gourd (USVL1VR-Ls)lsimedB378
MELO3C031183.2Watermelon (Charleston Gray)medwcgB377
MELO3C031183.2Watermelon (Charleston Gray)medwcgB379
MELO3C031183.2Watermelon (97103) v1medwmB405
MELO3C031183.2Watermelon (97103) v1medwmB419
MELO3C031183.2Silver-seed gourdcarmedB0241
MELO3C031183.2Silver-seed gourdcarmedB0338
MELO3C031183.2Silver-seed gourdcarmedB0849
MELO3C031183.2Silver-seed gourdcarmedB0946
MELO3C031183.2Cucumber (Chinese Long) v3cucmedB132
MELO3C031183.2Cucumber (Chinese Long) v3cucmedB138
MELO3C031183.2Cucumber (Chinese Long) v3cucmedB225
MELO3C031183.2Watermelon (97103) v2medwmbB375
MELO3C031183.2Watermelon (97103) v2medwmbB379
MELO3C031183.2Wax gourdmedwgoB472