MELO3C031179.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031179.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionparamyosin-like
Locationchr05 : 12451992 .. 12452167 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGGTGATTGAGATCAAGCACAAAGAATATGAGTTGCTTCAAAGTAAATACGAGTTTCTGAGGCTTGACAATCTTACACATGATTCCATGGTCGATAAAGACAAGATTGAAGTCAATCGAGGAGTCGAAAGAGATGGAGAGTAAAATTCAACAACTCAAGGAATTGTACA

mRNA sequence

ATGAAGAAGGTGATTGAGATCAAGCACAAAGAATATGAGTTGCTTCAAAGTAAATACGAGTTTCTGAGGCTTGACAATCTTACACATGATTCCATGGTCGATAAAGACAAGATTGAAGTCAATCGAGGAGTCGAAAGAGATGGAGAGTAAAATTCAACAACTCAAGGAATTGTACA

Coding sequence (CDS)

ATGAAGAAGGTGATTGAGATCAAGCACAAAGAATATGAGTTGCTTCAAAGTAAATACGAGTTTCTGAGGCTTGACAATCTTACACATGATTCCATGGTCGATAAAGACAAGATTGAAGTCAATCGAGGAGTCGAAAGAGATGGAGAGTAA

Protein sequence

MKKVIEIKHKEYELLQSKYEFLRLDNLTHDSMVDKDKIEVNRGVERDGE
Homology
[Close]
BLAST of MELO3C031179.2 vs. NCBI nr
Match: KGN53387.1 (hypothetical protein Csa_4G051390 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 5.9e-08
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 1  MKKVIEIKHKEYELLQSKYEFLRLDNLTHDSMVDKDKIEVN 42
          M+K IE K+KEYELLQSKYEFLRLDNLTH SMV++DK+EV+
Sbjct: 52 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 92

[Close]
BLAST of MELO3C031179.2 vs. NCBI nr
Match: XP_011653209.1 (PREDICTED: TSA1-like protein [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 5.9e-08
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 1  MKKVIEIKHKEYELLQSKYEFLRLDNLTHDSMVDKDKIEVN 42
          M+K IE K+KEYELLQSKYEFLRLDNLTH SMV++DK+EV+
Sbjct: 58 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 98

[Close]
BLAST of MELO3C031179.2 vs. NCBI nr
Match: XP_022942684.1 (uncharacterized protein LOC111447644 isoform X1 [Cucurbita moschata])

HSP 1 Score: 58.5 bits (140), Expect = 7.2e-06
Identity = 28/39 (71.79%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 1  MKKVIEIKHKEYELLQSKYEFLRLDNLTHDSMVDKDKIE 40
          M+K IE K+KEYELLQSKYEFLRLD LTH+SM+++DK++
Sbjct: 55 MRKEIENKNKEYELLQSKYEFLRLDILTHESMLEQDKVD 93

[Close]
BLAST of MELO3C031179.2 vs. NCBI nr
Match: XP_022942686.1 (uncharacterized protein LOC111447644 isoform X3 [Cucurbita moschata])

HSP 1 Score: 58.5 bits (140), Expect = 7.2e-06
Identity = 28/39 (71.79%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 1  MKKVIEIKHKEYELLQSKYEFLRLDNLTHDSMVDKDKIE 40
          M+K IE K+KEYELLQSKYEFLRLD LTH+SM+++DK++
Sbjct: 55 MRKEIENKNKEYELLQSKYEFLRLDILTHESMLEQDKVD 93

[Close]
BLAST of MELO3C031179.2 vs. NCBI nr
Match: XP_022942685.1 (uncharacterized protein LOC111447644 isoform X2 [Cucurbita moschata])

HSP 1 Score: 58.5 bits (140), Expect = 7.2e-06
Identity = 28/39 (71.79%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 1  MKKVIEIKHKEYELLQSKYEFLRLDNLTHDSMVDKDKIE 40
          M+K IE K+KEYELLQSKYEFLRLD LTH+SM+++DK++
Sbjct: 55 MRKEIENKNKEYELLQSKYEFLRLDILTHESMLEQDKVD 93

[Close]
BLAST of MELO3C031179.2 vs. TrEMBL
Match: tr|A0A0A0KYB9|A0A0A0KYB9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-08
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 1  MKKVIEIKHKEYELLQSKYEFLRLDNLTHDSMVDKDKIEVN 42
          M+K IE K+KEYELLQSKYEFLRLDNLTH SMV++DK+EV+
Sbjct: 52 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 92

[Close]
BLAST of MELO3C031179.2 vs. TrEMBL
Match: tr|A0A1S3BTW3|A0A1S3BTW3_CUCME (uncharacterized protein LOC103493114 OS=Cucumis melo OX=3656 GN=LOC103493114 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-05
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0 

Query: 1  MKKVIEIKHKEYELLQSKYEFLRLDNLTHDSMVDKDKIEVN 42
          M+K IE    EYELLQSKYEF+RL N+THDSMV +DK+EV+
Sbjct: 58 MRKEIESMKIEYELLQSKYEFMRLHNITHDSMVQQDKVEVD 98

The following BLAST results are available for this feature:
BLAST of MELO3C031179.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53387.15.9e-0878.05hypothetical protein Csa_4G051390 [Cucumis sativus][more]
XP_011653209.15.9e-0878.05PREDICTED: TSA1-like protein [Cucumis sativus][more]
XP_022942684.17.2e-0671.79uncharacterized protein LOC111447644 isoform X1 [Cucurbita moschata][more]
XP_022942686.17.2e-0671.79uncharacterized protein LOC111447644 isoform X3 [Cucurbita moschata][more]
XP_022942685.17.2e-0671.79uncharacterized protein LOC111447644 isoform X2 [Cucurbita moschata][more]
BLAST of MELO3C031179.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031179.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031179.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KYB9|A0A0A0KYB9_CUCSA3.9e-0878.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1[more]
tr|A0A1S3BTW3|A0A1S3BTW3_CUCME1.4e-0568.29uncharacterized protein LOC103493114 OS=Cucumis melo OX=3656 GN=LOC103493114 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031179.2.1MELO3C031179.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031179.2Cucumber (Chinese Long) v3cucmedB137
MELO3C031179.2Wax gourdmedwgoB458
MELO3C031179.2Cucumber (Gy14) v2cgybmedB122
MELO3C031179.2Cucurbita maxima (Rimu)cmamedB494
MELO3C031179.2Cucurbita maxima (Rimu)cmamedB830
MELO3C031179.2Cucurbita moschata (Rifu)cmomedB481
MELO3C031179.2Cucurbita moschata (Rifu)cmomedB823
MELO3C031179.2Cucurbita pepo (Zucchini)cpemedB125
MELO3C031179.2Cucurbita pepo (Zucchini)cpemedB627
MELO3C031179.2Wild cucumber (PI 183967)cpimedB135
MELO3C031179.2Cucumber (Chinese Long) v2cumedB135
MELO3C031179.2Bottle gourd (USVL1VR-Ls)lsimedB125
MELO3C031179.2Watermelon (97103) v1medwmB417
MELO3C031179.2Silver-seed gourdcarmedB0711