MELO3C031085.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031085.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	dihydropyrimidinase
Location	chr05 : 1428517 .. 1433595 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATATCCAATTCAATTATGATACTTTTCTTGCATCGATGTCTAACAACTTGGAATCTTCAGGCATCGAGGAAAGAATGCATTTGGTATGGAATACAATGGTGGTAAGTTGTACATGCATTTGTTTTCTTCTTTTAGAATAGACAATTAAGTTTGAACTTTCTTACAAATCTCATCCAAAAATCTCTAACGTTCAGGAATCTGGTCAAATATCTGTCTGTGATTATGTTCGAATCACAAGCACGGAATGGTATGTGGTCTTGTTTGAAACACTTTTTTTCTTCTTTTCATTAATCTATAAAAGGTTTGTAACATGTAAAGAAAATAAACTGTTACTTGTCCAAAAAGAAAAAGAAAGTAGGAATAGTATGTGATCTTGTAACTATTTTATGACTATTAAACTGCTAATTCACCCAAAAGCTTAAGCTGGTGGTTGAAGGCAAATTTAATTATATATCACCAAAAATGACATCTAGAGGAACTTGTCCATTTTTATTTTAGTGTGGCTTTGTATAGCTTTTGAACTCTTTAAGTTTTTTCATATAGTATTTTGCTCACATGATAACTTGATCGTAGCTCAACTATTTAAGACATATGTCTTCGAATTAGAGGTTAGAAGTTTGAATCCTTATATCTCCAATGTCTTAGCACTTGGTTTACTTTGATGAAGTGCCAAACTTAAAAAACTACTCTGAAAAGTCTTTTGAAGTTTTACTGCTAAATGATTTTTGCTGCCTACGTCACCCATGGAGTTGTGAGGTTTACTATTTGCTCAGTGCTAGGATTTTCAATATATATCCAAAGAAAGGAGCAATTCTTGCTGGGTCTGATGCAGACATAATTATACTCAATCCAAATGCAAGTTTTGAAATATCTGCAAAGCATCATCACTCTAGAACTGACACAAATGTCTATGAAGGAAAGAAAGGGAAGGTAGAAGCTTCAAAACCATGCTTCAGTTCTCTTATGACAATATAATTTTGTGATTTGTGATTTCTTTATGTTTACTTTGTGCTAGATAATTTTAAGAGGTATGGATCGATGATGGGTAACTAGTTATGGTTAGCCTTTAAGAGACTATACTGCCTCAACATCTCTATTTCTTTTGGGAAAGGAAACATAACTTTCCATCGAATAAATGAAAGACTAATACTAAAATATACATTAAACTTGAAGAGAAGAGAGAAATTGAGAAAAAAGAAGACAGTACTATTGGAATACAAAGAAGTGAAGACACCAATAAGCGAACACTTAAAACCTTACATACCAACTCAAGAAAAGAAACAAAATCTAGAATACATGTTAACATTACAGCCAAAGCGAACTATAGACCATTGAAGCAGACGAAGAAAGAAGTTCTTTGAGACCTGAAGTGCAAGGATCGAACCACAAAGCAAATCAACTTGTAAACTGCCACCTCCAAGCTTGCAACTATTAGGAAAAAAATTGCAACTTCTTAAGAGCAAAACAATAAGGCTAAGTTGCAAAAACACGAGAATTCCACAATAATATTTCAATTCATGGACCAAACCACTAAGCTAAACTTTAACTTATGGTGAATAAGATAGACTTGATTCATCTGAAAGCCACATTTTTCATTCAAAGGAGATAATTTGACAGGGATTGTGCGACTTTCTGCTTGAACATTTTCACCATTTTGAACAAGGTATCAAAATCATCCGCAAATTAAACCTTTGAATTCTCCTCAACAAAATCATCTTATGCTAGAGTGTCCATAGTATCCTCACTACTAACACTAACATATTGAATCTCCGTCAGAATCATATCTAGAAAGATTGCTTGTGGGAGGTGGATGACTACAAACTTCTTTAACAAAAGAATTATTTGATGTTGGGATGTTAATGACCGATTGGCTACAATTCGAACCCAGAGGCAAAGGATGTAATTGTCAACCAGCTGTGAATCTTCTATGAAGAGACATATATAGGACTCCTACAGAGCCATCTGGATTGAACTCAAAATGTTTCTTTGCATATGACCCTTTTTTTCCGGCTGTAAGGAGGATAACATGGAAAGGAAGATCTTCAAACTTCACAGCCTCTTTACCGCCCTTTAAATCAACAGACTGTGGAGTGCTAAATTAACTTCAACATCCTAGTGAACAACTTAGTCATAAATCATAGTTTTGGTATGATTAACTCACGTGACATTTCTAATAACCTTTGGTGGGTCTACCATTTCACTAGGTTGTTATGGTGGAAGGGTTTAACCTTTTTGAATTAGGTTTTCTGCTTAATAACCTCAAGAATTTGGTGAGGATTTCTTTTAACAACTTGGTGCAAATACTTTGTTTTTTAGGAGTAACAAACAACTTGAAGATAGGCAGATTACTGTGTCTAGAAAATTGTGTAAATATTCATGCGATGAACACTATACTTGTGCATTGGCCCTATTTTCAATATTATACTTGCACGCATTTTAAAATTCAAACTGTAGATAATTGCATACTTGTCAAATCTTGTCCAATAGATCATTTTTGGTGTACACAATGTGTCAACAAATGTCAACAGTTCGATCTCTTCTAGTCACCATCAATGAATATTTACACAACTTTCTAGACACAGTAATCTGCCCATGTTTAAGAATGTGTATATTTTTCCCAGGGGAAGGTTGAAGTGACAATTTCTGGAGGAAAGATTGTTTGGGAAAACAATGAGCTAAAAGTTATTCCAGGTGCTGGGAAGTACATAGAGATGCCAGCTTTTAATTATTTGTTTGATGGAATTTACAAGGCAGATGCTCAGTACCTGTCCTCGACTCGTGCTCCGGTGAAACGTTTTCATTCTTCAACTTAAACCTTCAATCATCATAGTTTATGAAACTGTGTAATGATAGATAGTTGTTACGGATGGAATAGCCGAGATTGTATGGCCTGTATCCACCATGTACATAGTTGTTACGGATGGAATAACCAAGATTGCATGGCCTGTATCCACCATGTAGATCTATAGCAACTTCTTTTTAAGATACTGCACAGGATATTATTTTATAGCATAGTTTATTTACCTTGTTTTCCTCCATGAAGTAAGAAAATAAATTTCAAGGTTCCATGTTTTATAAGCTAAAGAGCCTAAACAAGATGCAGGGAAGGGGAAATTCGTGCAATTATCCATATGATGAACTTGTCTCATCTACATTTACATGCCAAGAAAAAAAAAAGGATTGAGAAAAACAGCACGATGTGACAAAAACATAGAGGAGTGAGTTGGCTTCTGTCTCATATCAAGGCCTGATACAACAATTGATGTAGGTCAGAATCTTCTTTTTCTTCTGCTGGATAAGAAAAAAGAAAAGAACAAGCATTAAATTTGCAATATTTATATTAATTTATATGTTTTACAAAAAATTATGTTGCAATCACTCACGTTTCTTCGGTCTCTATTTTACTATCAATTTTTAGGTCAATATAGAATCCATCTTGAAATGATCGTTACAAAGCCTGCTATTATAAATGCTAATGCTTATGTCCATTGTATAGTAGAACAAGATACTAAGTAAGATAAGAACTGTAGTCTTATTATTTTAAGATAATCGCGCATTACTTTAAAGTTACAGCTGTGGTTAAACTTCGGGAAAAGCTCTAATTACTGGAAGAGCAACTTCACAGAAGGCTATAAATGAAGTTGCCAACATCATGAATAGCGTAAAAGTAATCACCCATTAAGGGATATCATACAGCATCTGTTCCTCAGCCTTAGTATCCAACAGGTACTTTCTTCGATACAAATTCTTTTCAGCTTCTGTTATCAAATGTTACATTAAATTCTTGTTTCGTTTTCTTCATTAAGTTTAAAGTTTTGATTGGCCTTTTGAAGAGGACCGTGGGTTTGATAAAGAGCTTAGAGATAATGGATTTAATATGTGGTTAAACTTGAATGGGATTTAATATTTTGTAAGTTTTATTTTTTTGACACCCAATTGTTGCTTGTCGGGAGGGTTATCCAAAAAAAAAAAAAAAGGCTAGTTGTTGATCTCATTTGAGATTAAAGAGGGAAAAGAACAACTGATGCTGGCAAAAAATAAACATAACTCATTATAATTATTGACAAGAAAAAAGTAGTTGTTTTCTTGAGGTCGGAGGCTCAAGTCCTCTTTTCCCCTATTTTTTGTACTTAAAAGAGAATAGACGAAAGTACTTACTGGGCCAACAGAGTCATCTGGGGGTGGTTGATGATGATGTTGGTGGTGATGGTGGCGGTGTTGGTGTTCAAATGGCGATGGCGATGGCGATGGCGATGATGGCGATGTTTTTGGTGACAATGACTTTTATCCATGGCTTCCATTAACTCCCTTTCATTCCCTAGGCTGGTTTTTTTGAACTCAGTTAAGTCAGTTTTTTGTTGTTTTCTATCGGCTCGAGCTCGAGTAAATACAACAGAATAATTGCTTGCTCCTGGCGCATTGTGATCCCAACCCCCAAATTCTGGAACTGATCTCCACCTATTATTCTGCATAAACACACAAATATTCCAACCGAACTTTTAGTTGCATATTCAAAGAGATTCATCATATTTTTCTTCCTCACATCACCAATTTTTATGATTTTGATTGTTTTCTTATTTGTCCATTATGGTTGTTTTTGCCAGGAATTGTTCCAGATGCAAGAGAATCAAATACAAGGATTCTCTTGATTTAGGAGAAGAAAATAAAAAAAAATCATGATAACTTTTCCATTTTCTATTTTAGAAAAGAAAAAAACTTCGACTACACTCAATTAAAAGTTATCACGTGACAAATTATTCTTTTAAAAAATTACTAAAAAAGTATTGTCTTTGTATAGAGAATGGGAAACATGGAGATGCACTTAATCATTGTTCGAACGTTCGAGATGAAATGTTTCTAACTTTTAGCTAAAATTTTGGATGATTAACAATCTCTTAATCAAAATTTTGAACTATCGAGTCTCTATAATTCATTCTACTACCTAATTTTTGTATCTATAATTCATTCTACTACCTAATTTTGATACAAAAAGACTCCCAAAGTTTCAAGCAAAGACCAAAATATTTAATTAATCAACTTAAAGCATAATCATCCTCTAAATGCTTCTTTTTTCT

mRNA sequence

ATGCATATCCAATTCAATTATGATACTTTTCTTGCATCGATGTCTAACAACTTGGAATCTTCAGGCATCGAGGAAAGAATGCATTTGGTATGGAATACAATGGTGAATAGACAATTAAGTTTGAACTTTCTTACAAATCTCATCCAAAAATCTCTAACGTTCAGGAATCTGGTCAAATATCTGTCTGTGATTATGTTCGAATCACAAGCACGGAATGTATTTTGCTCACATGATAACTTGATCGTAGCTCAACTATTTAAGACATATGTCTTCGAATTAGAGCACTTGGTTTACTTTGATGAAGTGCCAAACTTAAAAAACTACTCTGAAAAGTCTTTTGAAGTTTTACTGCTAAATGATTTTTGCTGCCTACGTCACCCATGGAGTTGTGAGGTTTACTATTTGCTCAGTGCTAGGATTTTCAATATATATCCAAAGAAAGGAGCAATTCTTGCTGGGTCTGATGCAGACATAATTATACTCAATCCAAATGCAAGTTTTGAAATATCTGCAAAGCATCATCACTCTAGAACTGACACAAATGTCTATGAAGGAAAGAAAGGGAAGAGAGAAATTGAGAAAAAAGAAGACAGTACTATTGGAATACAAAGAAGTGAAGACACCAATAAGCGAACACTTAAAACCTTACATACCAACTCAAGAAAAGAAACAAAATCTAGAATACATGTTAACATTACAGCCAAAGCGAACTATAGACCATTGAAGCAGACGAAGAAAGAAGGGAAGGTTGAAGTGACAATTTCTGGAGGAAAGATTGTTTGGGAAAACAATGAGCTAAAAGTTATTCCAGGTGCTGGGAAGTACATAGAGATGCCAGCTTTTAATTATTTGTTTGATGGAATTTACAAGGCAGATGCTCAGTACCTGTCCTCGACTCGTGCTCCGATAGTTGTTACGGATGGAATAGCCGAGATTGTATGGCCTGTATCCACCATGTACATAGTTGTTACGGATGGAATAACCAAGATTGCATGGCCTGTATCCACCATACGAAAGTACTTACTGGGCCAACAGAGTCATCTGGGGGTGGTTGATGATGATGTTGGTGGTGATGGTGGCGGTGTTGGTGTTCAAATGGCGATGGCGATGGCGATGGCGATGATGGCGATGTTTTTGGAATTGTTCCAGATGCAAGAGAATCAAATACAAGGATTCTCTTGATTTAGGAGAAGAAAATAAAAAAAAATCATGATAACTTTTCCATTTTCTATTTTAGAAAAGAAAAAAACTTCGACTACACTCAATTAAAAGTTATCACGTGACAAATTATTCTTTTAAAAAATTACTAAAAAAGTATTGTCTTTGTATAGAGAATGGGAAACATGGAGATGCACTTAATCATTGTTCGAACGTTCGAGATGAAATGTTTCTAACTTTTAGCTAAAATTTTGGATGATTAACAATCTCTTAATCAAAATTTTGAACTATCGAGTCTCTATAATTCATTCTACTACCTAATTTTTGTATCTATAATTCATTCTACTACCTAATTTTGATACAAAAAGACTCCCAAAGTTTCAAGCAAAGACCAAAATATTTAATTAATCAACTTAAAGCATAATCATCCTCTAAATGCTTCTTTTTTCT

Coding sequence (CDS)

ATGCATATCCAATTCAATTATGATACTTTTCTTGCATCGATGTCTAACAACTTGGAATCTTCAGGCATCGAGGAAAGAATGCATTTGGTATGGAATACAATGGTGAATAGACAATTAAGTTTGAACTTTCTTACAAATCTCATCCAAAAATCTCTAACGTTCAGGAATCTGGTCAAATATCTGTCTGTGATTATGTTCGAATCACAAGCACGGAATGTATTTTGCTCACATGATAACTTGATCGTAGCTCAACTATTTAAGACATATGTCTTCGAATTAGAGCACTTGGTTTACTTTGATGAAGTGCCAAACTTAAAAAACTACTCTGAAAAGTCTTTTGAAGTTTTACTGCTAAATGATTTTTGCTGCCTACGTCACCCATGGAGTTGTGAGGTTTACTATTTGCTCAGTGCTAGGATTTTCAATATATATCCAAAGAAAGGAGCAATTCTTGCTGGGTCTGATGCAGACATAATTATACTCAATCCAAATGCAAGTTTTGAAATATCTGCAAAGCATCATCACTCTAGAACTGACACAAATGTCTATGAAGGAAAGAAAGGGAAGAGAGAAATTGAGAAAAAAGAAGACAGTACTATTGGAATACAAAGAAGTGAAGACACCAATAAGCGAACACTTAAAACCTTACATACCAACTCAAGAAAAGAAACAAAATCTAGAATACATGTTAACATTACAGCCAAAGCGAACTATAGACCATTGAAGCAGACGAAGAAAGAAGGGAAGGTTGAAGTGACAATTTCTGGAGGAAAGATTGTTTGGGAAAACAATGAGCTAAAAGTTATTCCAGGTGCTGGGAAGTACATAGAGATGCCAGCTTTTAATTATTTGTTTGATGGAATTTACAAGGCAGATGCTCAGTACCTGTCCTCGACTCGTGCTCCGATAGTTGTTACGGATGGAATAGCCGAGATTGTATGGCCTGTATCCACCATGTACATAGTTGTTACGGATGGAATAACCAAGATTGCATGGCCTGTATCCACCATACGAAAGTACTTACTGGGCCAACAGAGTCATCTGGGGGTGGTTGATGATGATGTTGGTGGTGATGGTGGCGGTGTTGGTGTTCAAATGGCGATGGCGATGGCGATGGCGATGATGGCGATGTTTTTGGAATTGTTCCAGATGCAAGAGAATCAAATACAAGGATTCTCTTGA

Protein sequence

MHIQFNYDTFLASMSNNLESSGIEERMHLVWNTMVNRQLSLNFLTNLIQKSLTFRNLVKYLSVIMFESQARNVFCSHDNLIVAQLFKTYVFELEHLVYFDEVPNLKNYSEKSFEVLLLNDFCCLRHPWSCEVYYLLSARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKEDSTIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGGKIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPIVVTDGIAEIVWPVSTMYIVVTDGITKIAWPVSTIRKYLLGQQSHLGVVDDDVGGDGGGVGVQMAMAMAMAMMAMFLELFQMQENQIQGFS

Homology

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BLAST of MELO3C031085.2 vs. NCBI nr
Match: XP_008449645.1 (PREDICTED: dihydropyrimidinase [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 8.8e-46
Identity = 107/166 (64.46%), Postives = 108/166 (65.06%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGK        
Sbjct: 414 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGK-------- 473

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGG 257
                                                             GKVEVTISGG
Sbjct: 474 --------------------------------------------------GKVEVTISGG 521

Query: 258 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAP+
Sbjct: 534 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPV 521

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BLAST of MELO3C031085.2 vs. NCBI nr
Match: XP_004140190.1 (PREDICTED: dihydropyrimidinase [Cucumis sativus] >KGN48090.1 hypothetical protein Csa_6G430660 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 104/166 (62.65%), Postives = 108/166 (65.06%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYPKKGAILAGSDADIIILNPNASFEIS+KHHHSRTDTNVYEGKKGK        
Sbjct: 414 ARIFNIYPKKGAILAGSDADIIILNPNASFEISSKHHHSRTDTNVYEGKKGK-------- 473

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGG 257
                                                             GKVEVTISGG
Sbjct: 474 --------------------------------------------------GKVEVTISGG 521

Query: 258 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           KIVWEN+EL+VIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAP+
Sbjct: 534 KIVWENDELRVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPV 521

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BLAST of MELO3C031085.2 vs. NCBI nr
Match: XP_023533036.1 (dihydropyrimidinase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.9 bits (450), Expect = 6.5e-41
Identity = 98/166 (59.04%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYPKKGAILAGSDADIIILNPNASFEISAK HH+R+DTNVY+GK+GK        
Sbjct: 427 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKSHHTRSDTNVYDGKRGK-------- 486

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGG 257
                                                             GKVEVTISGG
Sbjct: 487 --------------------------------------------------GKVEVTISGG 534

Query: 258 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           +IVWENNELKV+PGAGKYIEMPAFNYLFDGI KADAQYLSS RAP+
Sbjct: 547 RIVWENNELKVVPGAGKYIEMPAFNYLFDGIGKADAQYLSSLRAPV 534

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BLAST of MELO3C031085.2 vs. NCBI nr
Match: XP_022995058.1 (dihydropyrimidinase [Cucurbita maxima])

HSP 1 Score: 176.0 bits (445), Expect = 2.5e-40
Identity = 97/166 (58.43%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYPKKGAILAGSDADIIILNPNASFEISAK HH+R+DTNVY+GK+GK        
Sbjct: 427 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKSHHTRSDTNVYDGKRGK-------- 486

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGG 257
                                                             GKVEVTISGG
Sbjct: 487 --------------------------------------------------GKVEVTISGG 534

Query: 258 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           +IVWENNELKV+PGAGKYIEMPAF+YLFDGI KADAQYLSS RAP+
Sbjct: 547 RIVWENNELKVVPGAGKYIEMPAFSYLFDGIGKADAQYLSSLRAPV 534

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BLAST of MELO3C031085.2 vs. NCBI nr
Match: XP_022957842.1 (dihydropyrimidinase [Cucurbita moschata])

HSP 1 Score: 174.1 bits (440), Expect = 9.4e-40
Identity = 96/166 (57.83%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYPKKGAILAGSDADIIILNPNASFEISAK HH+R+DTNVY+GK+GK        
Sbjct: 427 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKSHHTRSDTNVYDGKRGK-------- 486

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGG 257
                                                             GKVEVTISGG
Sbjct: 487 --------------------------------------------------GKVEVTISGG 534

Query: 258 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           +IVWEN+ELKV+PGAGKYIEMPAF+YLFDGI KADAQYLSS RAP+
Sbjct: 547 RIVWENDELKVVPGAGKYIEMPAFSYLFDGIGKADAQYLSSLRAPV 534

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BLAST of MELO3C031085.2 vs. TAIR10
Match: AT5G12200.1 (pyrimidine 2)

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-39
Identity = 87/166 (52.41%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYP+KGAILAGSDADIIILNPN+S+EIS+K HHSR+DTNVYEG++GK        
Sbjct: 416 ARIFNIYPRKGAILAGSDADIIILNPNSSYEISSKSHHSRSDTNVYEGRRGK-------- 475

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGG 257
                                                             GKVEVTI+GG
Sbjct: 476 --------------------------------------------------GKVEVTIAGG 523

Query: 258 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           +IVWEN ELKV+P +GKYIEMP F+YLFDGI K+DA YLSS RAP+
Sbjct: 536 RIVWENEELKVVPRSGKYIEMPPFSYLFDGIEKSDANYLSSLRAPV 523

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BLAST of MELO3C031085.2 vs. Swiss-Prot
Match: sp|Q9FMP3|DPYS_ARATH (Dihydropyrimidinase OS=Arabidopsis thaliana OX=3702 GN=PYD2 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.6e-38
Identity = 87/166 (52.41%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYP+KGAILAGSDADIIILNPN+S+EIS+K HHSR+DTNVYEG++GK        
Sbjct: 416 ARIFNIYPRKGAILAGSDADIIILNPNSSYEISSKSHHSRSDTNVYEGRRGK-------- 475

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGG 257
                                                             GKVEVTI+GG
Sbjct: 476 --------------------------------------------------GKVEVTIAGG 523

Query: 258 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           +IVWEN ELKV+P +GKYIEMP F+YLFDGI K+DA YLSS RAP+
Sbjct: 536 RIVWENEELKVVPRSGKYIEMPPFSYLFDGIEKSDANYLSSLRAPV 523

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BLAST of MELO3C031085.2 vs. Swiss-Prot
Match: sp|Q60Q85|DHP1_CAEBR (Dihydropyrimidinase 1 OS=Caenorhabditis briggsae OX=6238 GN=dhp-1 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.5e-14
Identity = 48/144 (33.33%), Postives = 64/144 (44.44%), Query Frame = 0


Query: 137 SARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKE 196
           +A+IFNIYPKKG I  GSDADI+I NPNA+  ISA+ HH   D N++EG           
Sbjct: 379 AAKIFNIYPKKGRIAVGSDADIVIFNPNATRTISAETHHHNLDFNIFEG----------- 438

Query: 197 DSTIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISG 256
                                                           K  G  E+TIS 
Sbjct: 439 -----------------------------------------------IKCHGVAEITISR 464

Query: 257 GKIVWENNELKVIPGAGKYIEMPA 281
           G+IVW N +L+ +PG+GK++ + A
Sbjct: 499 GRIVWANGQLQTVPGSGKFVPLLA 464

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BLAST of MELO3C031085.2 vs. Swiss-Prot
Match: sp|Q21773|DHP1_CAEEL (Dihydropyrimidinase 1 OS=Caenorhabditis elegans OX=6239 GN=dhp-1 PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 3.3e-12
Identity = 47/144 (32.64%), Postives = 63/144 (43.75%), Query Frame = 0


Query: 137 SARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKE 196
           +A+IFNIYP+KG I  GSDADI+I NPNA+  IS   HH   D N++EG           
Sbjct: 379 AAKIFNIYPRKGRIAVGSDADIVIFNPNATRTISKDTHHHNLDFNIFEG----------- 438

Query: 197 DSTIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISG 256
                                            +N                G  EVTIS 
Sbjct: 439 ---------------------------------INC--------------HGVAEVTISR 464

Query: 257 GKIVWENNELKVIPGAGKYIEMPA 281
           G+IVW + +L+ +PG+GK+I + A
Sbjct: 499 GRIVWAHGKLQTVPGSGKFIPLLA 464

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BLAST of MELO3C031085.2 vs. Swiss-Prot
Match: sp|Q55DL0|DPYS_DICDI (Dihydropyrimidinase OS=Dictyostelium discoideum OX=44689 GN=pyd2 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.7e-12
Identity = 55/197 (27.92%), Postives = 75/197 (38.07%), Query Frame = 0


Query: 99  FDEVPNLKNYSEKSFEVLLLNDFCCLRHPWSCEVYYLLS---ARIFNIYPKKGAILAGSD 158
           F ++PN  N  E    ++  N     +  W C+     S   ARIFNIYP+KG I  G D
Sbjct: 341 FTKIPNGVNGVEDRMSIVWENGVNTGKLTW-CQFVRATSSEAARIFNIYPRKGRIDVGCD 400

Query: 159 ADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKEDSTIGIQRSEDTNKRTLKT 218
            DI+I +PN S  IS   HH   D N++EG                              
Sbjct: 401 GDIVIWDPNQSKTISKDTHHHAVDFNIFEG------------------------------ 460

Query: 219 LHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGGKIVWENNELKVIPGAGKY 278
                                        K  G    TI  G IVW +N+L  + G+G++
Sbjct: 461 ----------------------------IKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRF 478

Query: 279 IEMPAFNYLFDGIYKAD 293
           +  P F  +FDGI + D
Sbjct: 521 VPRPPFGPVFDGIEQRD 478

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BLAST of MELO3C031085.2 vs. Swiss-Prot
Match: sp|Q9I676|HYDA_PSEAE (D-hydantoinase/dihydropyrimidinase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=dht PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.3e-11
Identity = 41/150 (27.33%), Postives = 69/150 (46.00%), Query Frame = 0


Query: 137 SARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKE 196
           +A+IFN++P+KGAI  G+DAD+++ +P  S  +SA  HH R D N++EG           
Sbjct: 372 TAKIFNLFPRKGAIRVGADADLVLWDPQGSRTLSAATHHQRVDFNIFEG----------- 431

Query: 197 DSTIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISG 256
                         RT++ + ++                                 TIS 
Sbjct: 432 --------------RTVRGIPSH---------------------------------TISQ 463

Query: 257 GKIVWENNELKVIPGAGKYIEMPAFNYLFD 287
           GK++W   +L+  PGAG+Y+E PA+  +++
Sbjct: 492 GKLLWAAGDLRAEPGAGRYVERPAYPSVYE 463

[Close]

BLAST of MELO3C031085.2 vs. TrEMBL
Match: tr|A0A1S3BLV6|A0A1S3BLV6_CUCME (dihydropyrimidinase OS=Cucumis melo OX=3656 GN=LOC103491465 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.8e-46
Identity = 107/166 (64.46%), Postives = 108/166 (65.06%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGK        
Sbjct: 414 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGK-------- 473

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGG 257
                                                             GKVEVTISGG
Sbjct: 474 --------------------------------------------------GKVEVTISGG 521

Query: 258 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAP+
Sbjct: 534 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPV 521

[Close]

BLAST of MELO3C031085.2 vs. TrEMBL
Match: tr|A0A0A0KEI8|A0A0A0KEI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430660 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 104/166 (62.65%), Postives = 108/166 (65.06%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYPKKGAILAGSDADIIILNPNASFEIS+KHHHSRTDTNVYEGKKGK        
Sbjct: 414 ARIFNIYPKKGAILAGSDADIIILNPNASFEISSKHHHSRTDTNVYEGKKGK-------- 473

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISGG 257
                                                             GKVEVTISGG
Sbjct: 474 --------------------------------------------------GKVEVTISGG 521

Query: 258 KIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           KIVWEN+EL+VIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAP+
Sbjct: 534 KIVWENDELRVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPV 521

[Close]

BLAST of MELO3C031085.2 vs. TrEMBL
Match: tr|A0A2P4KDJ6|A0A2P4KDJ6_QUESU (Dihydropyrimidinase OS=Quercus suber OX=58331 GN=CFP56_14545 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 7.6e-38
Identity = 93/167 (55.69%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYP+KGAI  GSDADIIILNPN+SFEI+AK HHSR+DTNVYEG++GK ++E    
Sbjct: 497 ARIFNIYPRKGAIFPGSDADIIILNPNSSFEITAKSHHSRSDTNVYEGRRGKGKVE---- 556

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHV-NITAKANYRPLKQTKKEGKVEVTISG 257
            TI   R    N        +    E     ++ N   K + + L   +  GKVEVTI+G
Sbjct: 557 VTIAGGRIVWENDELKVVPGSGKYVEMPPFSYLFNGIDKGDAKYLSSLQAPGKVEVTIAG 616

Query: 258 GKIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           G+IVWEN+ELKV+PG+GKY+EMP F+YLF+GI K DA+YLSS +AP+
Sbjct: 617 GRIVWENDELKVVPGSGKYVEMPPFSYLFNGIDKGDAKYLSSLQAPV 659

[Close]

BLAST of MELO3C031085.2 vs. TrEMBL
Match: tr|A0A2P4KDK0|A0A2P4KDK0_QUESU (Dihydropyrimidinase OS=Quercus suber OX=58331 GN=CFP56_14545 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 7.6e-38
Identity = 93/167 (55.69%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 138 ARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKED 197
           ARIFNIYP+KGAI  GSDADIIILNPN+SFEI+AK HHSR+DTNVYEG++GK ++E    
Sbjct: 585 ARIFNIYPRKGAIFPGSDADIIILNPNSSFEITAKSHHSRSDTNVYEGRRGKGKVE---- 644

Query: 198 STIGIQRSEDTNKRTLKTLHTNSRKETKSRIHV-NITAKANYRPLKQTKKEGKVEVTISG 257
            TI   R    N        +    E     ++ N   K + + L   +  GKVEVTI+G
Sbjct: 645 VTIAGGRIVWENDELKVVPGSGKYVEMPPFSYLFNGIDKGDAKYLSSLQAPGKVEVTIAG 704

Query: 258 GKIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           G+IVWEN+ELKV+PG+GKY+EMP F+YLF+GI K DA+YLSS +AP+
Sbjct: 705 GRIVWENDELKVVPGSGKYVEMPPFSYLFNGIDKGDAKYLSSLQAPV 747

[Close]

BLAST of MELO3C031085.2 vs. TrEMBL
Match: tr|A0A2P5DR14|A0A2P5DR14_PARAD (Hydantoinase/dihydropyrimidinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_039810 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37
Identity = 93/167 (55.69%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 137 SARIFNIYPKKGAILAGSDADIIILNPNASFEISAKHHHSRTDTNVYEGKKGKREIEKKE 196
           SARIFNIYPKKGAILAGSDADIIILNPNASFEISAK HHSRTDTNVYEGK+ K       
Sbjct: 416 SARIFNIYPKKGAILAGSDADIIILNPNASFEISAKSHHSRTDTNVYEGKRVK------- 475

Query: 197 DSTIGIQRSEDTNKRTLKTLHTNSRKETKSRIHVNITAKANYRPLKQTKKEGKVEVTISG 256
                                                              GKVEVTI+G
Sbjct: 476 ---------------------------------------------------GKVEVTIAG 524

Query: 257 GKIVWENNELKVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPI 304
           G+IVW+N+ELKV+PG+GKY EMP F YLFDGI KADA YLSS RAP+
Sbjct: 536 GRIVWQNDELKVVPGSGKYTEMPPFGYLFDGIDKADANYLSSLRAPV 524

The following BLAST results are available for this feature:

BLAST of MELO3C031085.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449645.1	8.8e-46	64.46	PREDICTED: dihydropyrimidinase [Cucumis melo]	[more]
XP_004140190.1	1.7e-44	62.65	PREDICTED: dihydropyrimidinase [Cucumis sativus] >KGN48090.1 hypothetical protei...	[more]
XP_023533036.1	6.5e-41	59.04	dihydropyrimidinase [Cucurbita pepo subsp. pepo]	[more]
XP_022995058.1	2.5e-40	58.43	dihydropyrimidinase [Cucurbita maxima]	[more]
XP_022957842.1	9.4e-40	57.83	dihydropyrimidinase [Cucurbita moschata]	[more]

BLAST of MELO3C031085.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12200.1	2.5e-39	52.41	pyrimidine 2	[more]

BLAST of MELO3C031085.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FMP3\|DPYS_ARATH	4.6e-38	52.41	Dihydropyrimidinase OS=Arabidopsis thaliana OX=3702 GN=PYD2 PE=1 SV=1	[more]
sp\|Q60Q85\|DHP1_CAEBR	3.5e-14	33.33	Dihydropyrimidinase 1 OS=Caenorhabditis briggsae OX=6238 GN=dhp-1 PE=3 SV=1	[more]
sp\|Q21773\|DHP1_CAEEL	3.3e-12	32.64	Dihydropyrimidinase 1 OS=Caenorhabditis elegans OX=6239 GN=dhp-1 PE=1 SV=2	[more]
sp\|Q55DL0\|DPYS_DICDI	5.7e-12	27.92	Dihydropyrimidinase OS=Dictyostelium discoideum OX=44689 GN=pyd2 PE=1 SV=1	[more]
sp\|Q9I676\|HYDA_PSEAE	6.3e-11	27.33	D-hydantoinase/dihydropyrimidinase OS=Pseudomonas aeruginosa (strain ATCC 15692 ...	[more]

BLAST of MELO3C031085.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BLV6\|A0A1S3BLV6_CUCME	5.8e-46	64.46	dihydropyrimidinase OS=Cucumis melo OX=3656 GN=LOC103491465 PE=4 SV=1	[more]
tr\|A0A0A0KEI8\|A0A0A0KEI8_CUCSA	1.1e-44	62.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430660 PE=4 SV=1	[more]
tr\|A0A2P4KDJ6\|A0A2P4KDJ6_QUESU	7.6e-38	55.69	Dihydropyrimidinase OS=Quercus suber OX=58331 GN=CFP56_14545 PE=4 SV=1	[more]
tr\|A0A2P4KDK0\|A0A2P4KDK0_QUESU	7.6e-38	55.69	Dihydropyrimidinase OS=Quercus suber OX=58331 GN=CFP56_14545 PE=4 SV=1	[more]
tr\|A0A2P5DR14\|A0A2P5DR14_PARAD	1.3e-37	55.69	Hydantoinase/dihydropyrimidinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Vocabulary: **INTERPRO**
Term	Definition
IPR011059	Metal-dep_hydrolase_composite

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0015940	pantothenate biosynthetic process
biological_process	GO:0006212	uracil catabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
molecular_function	GO:0004157	dihydropyrimidinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031085.2.1	MELO3C031085.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.20.20.140		coord: 130..188 e-value: 1.9E-15 score: 58.9
None	No IPR available	PANTHER	PTHR11647:SF1	COLLAPSIN RESPONSE MEDIATOR PROTEIN	coord: 21..192
None	No IPR available	PANTHER	PTHR11647	AMINOHYDROLASE	coord: 236..296 coord: 21..192
None	No IPR available	PANTHER	PTHR11647:SF1	COLLAPSIN RESPONSE MEDIATOR PROTEIN	coord: 236..296
IPR011059	Metal-dependent hydrolase, composite domain superfamily	GENE3D	G3DSA:2.30.40.10		coord: 191..284 e-value: 1.4E-6 score: 30.4
IPR011059	Metal-dependent hydrolase, composite domain superfamily	SUPERFAMILY	SSF51338	Composite domain of metallo-dependent hydrolases	coord: 134..187
IPR011059	Metal-dependent hydrolase, composite domain superfamily	SUPERFAMILY	SSF51338	Composite domain of metallo-dependent hydrolases	coord: 234..296

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C031085.2	Csa6G430660	Cucumber (Chinese Long) v2	cumedB471
MELO3C031085.2	CSPI06G23770	Wild cucumber (PI 183967)	cpimedB480
MELO3C031085.2	Cucsa.086920	Cucumber (Gy14) v1	cgymedB097
MELO3C031085.2	CmaCh02G012840	Cucurbita maxima (Rimu)	cmamedB654
MELO3C031085.2	CmoCh02G013260	Cucurbita moschata (Rifu)	cmomedB642
MELO3C031085.2	Lsi10G011020	Bottle gourd (USVL1VR-Ls)	lsimedB074
MELO3C031085.2	Cp4.1LG05g04710	Cucurbita pepo (Zucchini)	cpemedB829
MELO3C031085.2	CsGy6G023120	Cucumber (Gy14) v2	cgybmedB427
MELO3C031085.2	ClCG02G022760	Watermelon (Charleston Gray)	medwcgB370
MELO3C031085.2	Bhi10G000188	Wax gourd	medwgoB485
MELO3C031085.2	Carg02680	Silver-seed gourd	carmedB0917
MELO3C031085.2	CsaV3_6G038890	Cucumber (Chinese Long) v3	cucmedB490

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C031085.2	Cucurbita maxima (Rimu)	cmamedB598
MELO3C031085.2	Cucurbita moschata (Rifu)	cmomedB585
MELO3C031085.2	Cucurbita pepo (Zucchini)	cpemedB324
MELO3C031085.2	Watermelon (97103) v1	medwmB408
MELO3C031085.2	Silver-seed gourd	carmedB0533
MELO3C031085.2	Watermelon (97103) v2	medwmbB368